Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq20901 196 9e-45
seq18882 179 7e-40
>seq20901
Length=225483
Score = 196 bits (216), Expect = 9e-45
Identities = 448/664 (67%), Gaps = 14/664 (2%)
Strand=Plus/Minus
Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGC 42343
||| || ||| ||| |||||| ||||||||||| || | || | || ||||| ||
Sbjct 71179 ATCCAGTACCCGGAAATCTGGGAAATGTACAAGAAAGCCGAAGCT-TCATTTTGGACGGC 71121
Query 42344 CGAGGAGATTGACCTGGCCAAGGACA-CGGCCGGCTGGGAGTCACTGTCTGAGAACGAAA 42402
|||||| | |||||| | |||||| | ||| | ||||| || || | | |||| |
Sbjct 71120 GGAGGAGGTCGACCTGTCGCAGGACATCCGCCAG-TGGGAATCCCTAACCGCCGACGAGA 71062
Query 42403 AGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGA 42462
| ||| ||| || | || ||||||||||||||||| || || || ||| || |
Sbjct 71061 AACACTTCATCACTCACGTGCTCGCCTTCTTCGCCGCCTCGGATGGAATCGTCCTCGAAA 71002
Query 42463 ACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCT 42522
|||| || |||||||||||||||| || || || |||||||| |||||||||||
Sbjct 71001 ACCTCGCTGCCAGGTTCATGAAAGAAGTCCAAGTCTCCGAGGCGCGTGCCTTCTACGGCT 70942
Query 42523 TCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACA 42582
|||| || ||||| |||||| | ||||| || ||||| | || || | |||||||
Sbjct 70941 TCCAAATCGCCATCGAGAACATCCACTCCGAAATGTACTCGCTCCTTCTAGAAACGTACA 70882
Query 42583 TCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT-- 42640
| | | ||| ||| | | | | || ||| | || ||| |||| ||| |
Sbjct 70881 TAAAGAACTCCGACGAAAAGAGCCGCTTATTTCGCGCCTTTGAAACGGTGCCGTGCGTTG 70822
Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGA 42700
| ||| ||||| || ||||| || || |||||||| | | || | || |||| ||
Sbjct 70821 CCAGA--AAGGCCGATTGGGCCCTAAATTGGATCGA-CGGCTCG--GAGACATTCGCGGA 70767
Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760
||| ||| |||| ||| | ||| || || || || ||||||||| ||| | | ||
Sbjct 70766 GAGACTGATAGCGTTTGCTTGCGTGGAAGGGATATTTTTCTCGGGCAGTTTCTGCGCGAT 70707
Query 42761 CTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAG 42820
|| ||| | || || | || ||||| || || |||||||| ||||| || |||
Sbjct 70706 ATTTTGGTTAAAAAAGCGCGGGTTAATGCCGGGGCTAACCTTCTCAAACGAGCTAATCTC 70647
Query 42821 CAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCA 42880
| ||||| || || || | || || || || | |||| | ||| || ||| |
Sbjct 70646 GCGAGACGAAGGACTCCACTGCGATTTCGCGTG---CTTGTTGTACAGCTTGCTGAGGAA 70590
Query 42881 CAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGA 42940
||| ||||||| || || || | | |||||| |||||||| |||| |||
Sbjct 70589 CAAATTAAGCGAGGAGCGCGTGAAGGGGATAGTGAAGGAGGCGGTGGAGATAGAGAGGGA 70530
Query 42941 GTTC 42944
||||
Sbjct 70529 GTTC 70526
>seq18882
Length=869960
Score = 179 bits (198), Expect = 7e-40
Identities = 358/523 (68%), Gaps = 7/523 (1%)
Strand=Plus/Minus
Query 42336 TGGACCGCCGAGGAGATTGACCTGGC-CAAGGACACGGCCGGCTGGGAGTCACTGTCTGA 42394
|||||||| ||||| |||| || | |||| | | ||| ||||||| | || | |
Sbjct 814737 TGGACCGCTGAGGAAGTTGATCTTTCGCAAGATCTCCGCCA-CTGGGAGGCCCTAACCGC 814679
Query 42395 GAACGAAAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGT 42454
|||| ||| ||| ||| || | || ||||||||||||||||| |||||||| ||
Sbjct 814678 TGACGAGAAGCACTTCGTCACGCACGTGCTCGCCTTCTTCGCCGCCTCCGACGGCATCGT 814619
Query 42455 CAATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTT 42514
| |||||||| ||| ||||||||||| ||||| ||| | |||||||| |||
Sbjct 814618 CCTCGAGAACCTCGCCGGCAGGTTCATGACGGAGGTCCAGGTCGCCGAGGCGCGTGCCTT 814559
Query 42515 CTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAA 42574
|||||||||||| || ||||| |||||| | ||||| || ||||| | || || |
Sbjct 814558 CTACGGCTTCCAAATCGCCATTGAGAACATCCACTCCGAAATGTACTCGCTGCTTCTAGA 814499
Query 42575 CACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCC 42634
|| |||||| | ||| ||| || | || || | ||||| || ||| | ||
Sbjct 814498 AACTTACATCAAAAACTCCGACGAAAAGAATCGTCTCTTTCACGCCATCGAAACGGTTCC 814439
Query 42635 CTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTT 42694
|||| || ||||| || |||||| | || |||||||| | | || | || ||
Sbjct 814438 CTGCGTCGCAAAGAAAGCCACGTGGGCGTTAAATTGGATCGA-CGGCTCG--GAGACTTT 814382
Query 42695 CGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTC-GGGCGCCTTCG 42753
|| |||||| | | || ||| | ||| ||||| || |||||||| ||| | || |
Sbjct 814381 CGCCGAGAGATTAATCGCGTTTGCTTGCGTGGAGGGGATTTTCTTCTCAGGGAGTTTTTG 814322
Query 42754 CCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAAC 42813
| | || || |||||||| || | || ||||| ||| | || ||||| |||||
Sbjct 814321 -CGCGATATTTTGGCTCAAAAAGCGAGGGTTAATGCCGGGATTAACATTCTCAAACGAGT 814263
Query 42814 TCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCT 42856
| ||| | || ||||| || || | || ||||| |||||
Sbjct 814262 TGATCTCGCGAGATGAGGGTCTCCACTGCGATTTTGCGTGCCT 814220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944037011456000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |