Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq4300 109 4e-19 seq16041 96.9 3e-15 seq3592 96.9 3e-15 seq3274 93.3 3e-14 seq22579 87.8 1e-12 >seq4300 Length=903212 Score = 109 bits (120), Expect = 4e-19 Identities = 166/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || ||||| |||| |||||||||||| || ||||||||||||||||||||| | Sbjct 850813 ACCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCG- 850755 Query 33960 CAATTGTCGCT-CGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 ||| ||| | | || |||| ||||| |||||||| ||||||||||||||||| | Sbjct 850754 CAAGCGTCCTTCCATCCTCCAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGATCAGGTG 850695 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGAT-TCG 34077 | | | || |||||| |||||| ||| | | | | |||| || | ||| Sbjct 850694 GGATCCCTTCCTTGTCCTGGATTTTTGCCTTGACGTTGTCAATGGTGTCAG-AGCTCTCG 850636 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||| | || || || ||||| || || ||||| || ||||| |||||| Sbjct 850635 ACTTCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCATT 850585 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| |||||||| ||||| ||||| |||||| || ||||||||||| ||| Sbjct 191771 CCTCCCCTCAGACGCAGCACAAGATGGAGCGTCGACTCCTTTTGGATGTTGTAATCGGCC 191712 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 || || |||| |||| ||||||||||| || || || | |||||| ||| Sbjct 191711 AAGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCC 191658 >seq16041 Length=904 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 ||||| |||||||| || || || ||||||||| |||||||| || ||||| ||| Sbjct 352 AGCCGAAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGT 411 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| || | ||||||||||| || || ||||||||||| ||| || | || ||| Sbjct 412 CCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCC 471 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089 |||||| || || ||| | | | | || | || || || | |||| Sbjct 472 TTGTCCTGGATCTTCGCCTTGACGTTGTCAATTGTGTCGGAGGACTCCACCTCCAACGTT 531 Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130 || || || || ||||| |||||||| ||||| ||||| || Sbjct 532 ATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 572 >seq3592 Length=5743183 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 ||||| |||||||| || || || ||||||||| |||||||| || ||||| ||| Sbjct 5552059 AGCCGAAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGT 5552000 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| || | ||||||||||| || || ||||||||||| ||| || | || ||| Sbjct 5551999 CCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCC 5551940 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089 |||||| || || ||| | | | | || | || || || | |||| Sbjct 5551939 TTGTCCTGGATCTTCGCCTTGACGTTGTCAATTGTGTCGGAGGACTCCACCTCCAACGTT 5551880 Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130 || || || || ||||| |||||||| ||||| ||||| || Sbjct 5551879 ATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 5551839 >seq3274 Length=969234 Score = 93.3 bits (102), Expect = 3e-14 Identities = 91/115 (79%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || ||||| |||| |||||||||||| || |||||||||||||||||||| | | Sbjct 910800 CCACCCCTCAGACGCAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCG-C 910742 Query 33961 AATTGTCGCT-CGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 | ||| | | || ||||| ||||||||||| || |||| |||||||||||| Sbjct 910741 GAGCGTCCTTCCATCCTCCAACTGCTTGCCGGCGAAGATCAAACGCTGCTGATCC 910687 >seq22579 Length=2223405 Score = 87.8 bits (96), Expect = 1e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||| |||| |||||||||||||| ||||| ||||||||| ||||||||||| ||| Sbjct 1020553 CCTCTCCTCAAGCGCAGCACCAGATGGAGCGTCAACTCCTTCTGGATGTTGTAATCGGCC 1020612 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || || | ||| ||||||||||| || | ||| | |||||| |||| ||| Sbjct 1020613 AAGATGCGGCCGCCCTCCCGCTGCTTGCCGGCGAAAACCAGCCTCTGCTGCTCCAGAGGC 1020672 Query 34021 A 34021 | Sbjct 1020673 A 1020673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396938516531200