Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq18882 109 7e-19 seq5781 82.4 9e-11 >seq18882 Length=869960 Score = 109 bits (120), Expect = 7e-19 Identities = 376/579 (65%), Gaps = 13/579 (2%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || |||||||||||| || || ||||| | || || ||||| | ||| Sbjct 814226 GCAAAATCGCAGTGGAGACCCTCATCTCGCGAGATCAACTCGTTTGAGAATGTTAATCCC 814285 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| | || ||||| || | ||| || ||||| ||||| || |||||||| || Sbjct 814286 GGCATTAACCCTCGCTTTTTGAGCCAAAATATCGCGCAAAAACTCCCTGAGAAGAAAATC 814345 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAAC 126226 |||||||| || || ||||| | | | ||| || || | ||| ||| | | Sbjct 814346 CCCTCCACGCAAGCAAACGCGATTAATCTCTCGGCGAAAGTCTCCGA---GCCGTCGATC 814402 Query 126227 CACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG 126286 || || | ||||||| || || || ||| || || || || | ||| || | |||| Sbjct 814403 CAATTTAACGCCCACGTGGCTTTCTTTGCGACGCAGGGAACCGTTTCGATGGCGTGAAAG 814462 Query 126287 AGTTCCTTCTTTTCTGATGGA-TCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 || |||||||| | ||| | ||||||||| | |||| || || || |||| Sbjct 814463 AGACGATTCTTTTC-GTCGGAGTTTTTGATGTAAGTTTCTAGAAGCAGCGAGTACATTTC 814521 Query 126346 GCCGTGGACCATTTCATTATGGC--ACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 126403 | ||||| | ||| ||||| || | ||||||| | ||||| ||| | | Sbjct 814522 GGAGTGGATGTTCTCA--ATGGCGATTTGGAAGCCGTAGAAGGCACGCGCCTCGGCGACC 814579 Query 126404 TGTACCTCATCGGCA--AAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 126461 || ||||| || || || || || ||||| | || || || ||||| | | Sbjct 814580 TGGACCTC--CGTCATGAACCTGCCGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGCGG 814637 Query 126462 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGT 126521 | || || || || | | | | | ||| | || || | || | |||| || ||||| Sbjct 814638 CGAAGAAGGCGAGCACGTGCGTGACGAAGTGCTTCTCGTCAGCGGTTAGGGCCTCCCAGT 814697 Query 126522 CGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTCT 126581 | ||||| | ||| ||||| || ||||| || |||||| | || || |||| Sbjct 814698 GGCGGAGATCTTGCGAAAGATCAACTTCCTCAGCGGTCCAAAACGACGCTTCGGCTTTCT 814757 Query 126582 TATAGAGTTCCCAAAGGTGGGGATACTTCAGGGGGAACA 126620 | || | |||||||| || || |||| | ||||||| Sbjct 814758 TGTACATTTCCCAAATTTGTGGGTACTGAATCGGGAACA 814796 >seq5781 Length=108451 Score = 82.4 bits (90), Expect = 9e-11 Identities = 214/319 (67%), Gaps = 8/319 (3%) Strand=Plus/Plus Query 10837 GTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAA 10896 ||| || || || || |||| ||| || || | ||||| |||||||| || ||||| Sbjct 97602 GTTAGTTGCAGCAATCACAATGATACCAGTATTACCCTCAAAACCATCCATTTCCGTCAA 97661 Query 10897 GAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGT 10954 || || || | |||||| || | ||||||||| | | | | | || | | | | Sbjct 97662 AAGCTGGTTAAGGGTTTGCTCTCTCTCATCATTCCCT--CCTCCAATTCCAGTTCCTCTT 97719 Query 10955 TGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTC-ACGGGC 11013 || | || ||||| ||||||||||| | || || || || || ||| || || | Sbjct 97720 TGTCTTCCAACGGCATCAATTTCATCCACAAATACAATGCAAGGAGCATTCTCTTTGGCC 97779 Query 11014 AACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATT 11073 ||| ||| | |||||||||||| ||||| ||||| |||||||| || ||||| | Sbjct 97780 TTCTTGAAA-AGATCTCGGACTCTAGATGCACCTACACCAACAAACATCTCAACAAACTC 97838 Query 11074 GGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGA 11132 | | | | || | || || || || || |||||| || || || ||| || | Sbjct 97839 AGAACCTG-ATATGGAGAAAAATGGAACACCGGCTTCACCAGCAATTGCCTTGGCAAGAA 97897 Query 11133 GGGTCTTCCCCGTCCCAGG 11151 | |||||||| || || || Sbjct 97898 GAGTCTTCCCGGTTCCTGG 97916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597162446848000