Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq4300 107 2e-18
seq25300 102 8e-17
seq16041 102 8e-17
seq3592 102 8e-17
seq5785 100 3e-16
>seq4300
Length=903212
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||| || || || ||| ||||||||| || || ||||
Sbjct 191510 GACTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCG 191451
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||| |||||||| || || ||||| ||||| ||| || || |
Sbjct 191450 AAGATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACG 191391
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||||| ||||||||||| || | || || || |||| |||||||
Sbjct 191390 TTGTCGATCGTGTCGGAGCTCTCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTTT 191331
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 191330 ACAAAGATCTGCAT 191317
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| || |||||||||||||| ||| || ||| || ||| |||||||| || |||| |
Sbjct 850551 GATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCGGCA 850492
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| |||||||| || || || || ||||| ||| || || |
Sbjct 850491 AAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACG 850432
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||||| |||||| |||| || | || || || || || |||||
Sbjct 850431 TTGTCGATGGTGTCGGAGCTCTCCACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTTTTC 850372
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 850371 ACAAATATCTGCAT 850358
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || || | ||| | || | ||| | | |||||||||| || |||||||| |||
Sbjct 740047 GCCTCCGCGGAGACGAAGGACAAGATGAAGGGTTGACTCCTTCTGTATGTTGTAATCGGC 739988
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || || ||||||||| || || || | | |||| || | |||||||||||| ||
Sbjct 739987 CAAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGTTGGTCCGGCGG 739928
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || |||| | || | |||||||| ||| ||
Sbjct 739927 AATTCCCTCCTTGTCTTGGATCTTGGCCTTTACGTTGTCGATGGTGTCGGAGCTCTCGAC 739868
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| || | ||||| || || |||||||| || || ||||||||
Sbjct 739867 TTCGAGAGTAATAGTTTTGCCGGTAAGAGTTTTCACGAAGATCTGCAT 739820
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || | || ||||| || | ||| | | ||||||||||| |||||||| ||| |
Sbjct 191771 CCTCCCCTCAGACGCAGCACAAGATGGAGCGTCGACTCCTTTTGGATGTTGTAATCGGCC 191712
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||| || || || |||| |||| || | ||| |||||||| ||
Sbjct 191711 AAGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGA 191652
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||| ||||| ||| || || | | || | |||||||| |||||||
Sbjct 191651 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACC 191592
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|| | || | ||| || || ||||| || || ||||| |||||||||
Sbjct 191591 TCCAGAGTGATCGTCTTCCCGGTCAGGGTCTTGACAAAGATCTGCATG 191544
Score = 96.9 bits (106), Expect = 3e-15
Identities = 141/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||||||||||||||| ||| | ||| || |||||||| || || ||||
Sbjct 191966 GACTCCTTTTGAATGTTGTAATCGGCGAGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCG 191907
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| || | ||| ||||||||||| || || |||||||| ||| | || | || |
Sbjct 191906 AAGATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTTGTC-CTGAATCTTCGCCTTCAC 191848
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||||| ||||||||| | || | ||| || || |||| || |
Sbjct 191847 GTTG-TCGATCGTGTCGGAGCTCTCCACCTCCAGAGTGATCGTCTTCCCGGTCAACGTCT 191789
Query 138599 TTACAAAAATCTGCAT 138614
| || || ||||||||
Sbjct 191788 TGACGAAGATCTGCAT 191773
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||| | || |||||| || | ||| | | |||||||| ||||||||||| ||
Sbjct 850812 CCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGCA 850753
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||||| || || || |||| | |||| || ||||| || || || ||
Sbjct 850752 AGCGTCCTTCCATCCTCCAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGATCAGGTGGG 850693
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||| ||||| ||||||| || | | || | |||||| | ||| ||
Sbjct 850692 ATCCCTTCCTTGTCCTGGATTTTTGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCGACT 850633
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||| || || ||||| ||||| || || ||||||||
Sbjct 850632 TCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCAT 850586
>seq25300
Length=5305897
Score = 102 bits (112), Expect = 8e-17
Identities = 147/202 (73%), Gaps = 4/202 (2%)
Strand=Plus/Minus
Query 138419 TTGACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCG 138477
||||||||||||| ||||||||||| ||| | || | |||||| || || || |||
Sbjct 1946512 TTGACTCCTTTTGGATGTTGTAGTCAGCT-AGGGTTCTGCCGTCCTCAAGCTGCTTTCCG 1946454
Query 138478 GAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT 138537
| |||| ||||||||||||||||| || || || || ||||| ||| || ||
Sbjct 1946453 GCGAAGATGAGACGCTGTTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTG 1946394
Query 138538 A-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596
| ||||| | | |||||| | || || ||||| | || | || || || || || ||
Sbjct 1946393 ACATTGT-CGATGGTGTCCGATGATTCGACCTCTAGGGTTATAGTCTTTCCCGTTAGGGT 1946335
Query 138597 TTTTACAAAAATCTGCATGGCT 138618
||| || || ||||||||||||
Sbjct 1946334 TTTCACGAAGATCTGCATGGCT 1946313
>seq16041
Length=904
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || || || ||| ||||| || || ||||
Sbjct 376 GACTCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGTCCGTCTTCGAGCTGCTTGCCGGCG 435
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||| |||||||| || || || || ||||| ||| || || |
Sbjct 436 AAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACG 495
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||||| ||||||||||| | ||| | || ||||| || || |||||
Sbjct 496 TTGTCAATTGTGTCGGAGGACTCCACCTCCAACGTTATGGTCTTACCCGTTAGGGTTTTC 555
Query 138601 ACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 556 ACGAAGATCTGCAT 569
>seq3592
Length=5743183
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || || || ||| ||||| || || ||||
Sbjct 5552035 GACTCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGTCCGTCTTCGAGCTGCTTGCCGGCG 5551976
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||| |||||||| || || || || ||||| ||| || || |
Sbjct 5551975 AAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACG 5551916
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||||| ||||||||||| | ||| | || ||||| || || |||||
Sbjct 5551915 TTGTCAATTGTGTCGGAGGACTCCACCTCCAACGTTATGGTCTTACCCGTTAGGGTTTTC 5551856
Query 138601 ACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 5551855 ACGAAGATCTGCAT 5551842
>seq5785
Length=266748
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || ||||| | | |||||||||| || |||||||||||
Sbjct 242888 CCACCACGGAGACGAAGCACCAAATGGAGGGTTGACTCCTTCTGTATGTTGTAGTCAGCA 242947
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| || || |||||||| |||| | |||||| | |||||| || || ||
Sbjct 242948 AGAGTACGACCATCTTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGGG 243007
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | |||| || | ||||| | || ||
Sbjct 243008 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTG-TCGATTGTGTCAGAGCTTTCAAC 243066
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||| | || | || ||||| ||||| ||||| |||||||||||||||
Sbjct 243067 CTCCAAAGTTATAGTCTTACCGGTCAGGGTTTTCACAAAAATCTGCATG 243115
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465
|| ||||| | | |||| ||||| || ||||||||||| | || || |||||
Sbjct 243134 ACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGTCCATCCTCT 243193
Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525
||||||||||| | | |||| || | || ||||| || || || ||||| || || ||
Sbjct 243194 AGTTGTTTACCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTATC-CTG 243252
Query 138526 ATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583
| |||| | ||| |||| || | |||||||| |||||||| | || | || |
Sbjct 243253 AATTTTGGCTTTGACATTG-TCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTCT 243311
Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| ||||| || || |||||||| ||||||||
Sbjct 243312 TTCCAGTGAGGGTCTTTACAAAGATCTGCAT 243342
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465
|| ||||| | | |||| ||||| || ||||||||||| | || || |||||
Sbjct 171698 ACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGTCCATCCTCA 171757
Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525
|||||||| || | | |||| || | || ||||| || || || ||||| || || ||
Sbjct 171758 AGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTATC-CTG 171816
Query 138526 ATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583
| |||| | |||| |||| || | |||||| | |||||||| | || | || |
Sbjct 171817 AATTTTGGCTTTAACATTG-TCAATGGTGTCCGAGCTTTCCACCTCAAGGGTGATGGTCT 171875
Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
| ||||| || || |||||||| || ||||||
Sbjct 171876 TTCCAGTGAGGGTCTTTACAAAGATTTGCATG 171907
Score = 87.8 bits (96), Expect = 2e-12
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446
|| || || | ||| | || || || | | |||||||||| || ||||||||||| |||
Sbjct 171452 CCACCACGGAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGTATGTTGTAGTCAGCT 171511
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| || || || |||||||| || | | |||| | | ||| || || |||||
Sbjct 171512 -AGAGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGG 171570
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564
|| ||||| ||||| ||| | || | || |||| || | ||||| | ||
Sbjct 171571 GATGCCTTCCTTGTC-CTGAATCTTAGCCTTGACATTG-TCAATTGTGTCAGAGCTTTCA 171628
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | || | |||||||| || || ||||| ||||||||||||||
Sbjct 171629 ACCTCCAAAGTTATAGTTTTACCGGTAAGGGTTTTCACAAAAATCTGCAT 171678
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| || | || | ||||| | |||||||| || || |||||||| |
Sbjct 165389 CCACCACGCAGGCGAAGGACAAGATGTAAAGTAGACTCCTTCTGGATATTGTAGTCAGCC 165448
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||||| ||||| || || || || | | |||| | | ||| || || |||||
Sbjct 165449 AAAGTACGCCCATCCTCCAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGAGGA 165508
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||| ||||| |||||| || | | || | |||||| | ||| |||
Sbjct 165509 ATCCCTTCCTTGTCCTGGATTTTAGCCTTCACATTATCAATGGTGTCTGAACTCTCAACC 165568
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| || |||| || || ||||||||||||||
Sbjct 165569 TCCAGGGTGATGGTTTTTCCCGTCAATGTCTTCACAAAAATCTGCAT 165615
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| || | || | ||||| | |||||||| || || |||||||| |
Sbjct 166662 CCACCACGCAGGCGAAGGACAAGATGTAAAGTAGACTCCTTCTGGATATTGTAGTCAGCC 166721
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||||| ||||| || || || || | | |||| | | ||| || || |||||
Sbjct 166722 AAAGTACGCCCATCCTCCAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGAGGA 166781
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||| ||||| |||||| || | | || | |||||| | ||| |||
Sbjct 166782 ATCCCTTCCTTGTCCTGGATTTTAGCCTTCACATTATCAATGGTGTCTGAACTCTCAACC 166841
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| || |||| || || ||||||||||||||
Sbjct 166842 TCCAGGGTGATGGTTTTTCCCGTCAATGTCTTCACAAAAATCTGCAT 166888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496103596032000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |