Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq18882 113 6e-20 >seq18882 Length=869960 Score = 113 bits (124), Expect = 6e-20 Identities = 380/581 (65%), Gaps = 17/581 (3%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || |||||||||||| || || ||||| | || || ||||| | || Sbjct 814226 GCAAAATCGCAGTGGAGACCCTCATCTCGCGAGATCAACTCGTTTGAGAATGTTAATCCC 814285 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| | || ||||| || | ||| || ||||| ||||| || |||||||| ||| Sbjct 814286 GGCATTAACCCTCGCTTTTTGAGCCAAAATATCGCGCAAAAACTCCCTGAGAAGAAAATC 814345 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGC-AAAGGAGCGGGACTTTGTATCAAA 127698 |||||||| || || ||||| | || | |||||| |||| | | | || | Sbjct 814346 CCCTCCACGCAAGCAAACGCGATTAATCTCTCGGCGAAAGTCTCCGAGC----CGTCGAT 814401 Query 127699 CCACTTCATCGCCCACTGTGCCTTT-TTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757 ||| || | ||||||| ||| |||| || ||| || || || || | ||| || | || Sbjct 814402 CCAATTTAACGCCCAC-GTGGCTTTCTTTGCGACGCAGGGAACCGTTTCGATGGCGTGAA 814460 Query 127758 AGAGTTCCTTCTTTTCTGATGGA-TCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 127816 |||| |||||||| | ||| | ||||||||| | |||| || || || || Sbjct 814461 AGAGACGATTCTTTTC-GTCGGAGTTTTTGATGTAAGTTTCTAGAAGCAGCGAGTACATT 814519 Query 127817 TCGCCGTGGACCATTTCATTATGGC--ACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 127874 ||| ||||| | ||| ||||| || | ||||||| | ||||| ||| | Sbjct 814520 TCGGAGTGGATGTTCTCA--ATGGCGATTTGGAAGCCGTAGAAGGCACGCGCCTCGGCGA 814577 Query 127875 TCTGTACCTCATCGGCA--AAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 127932 ||| ||||| || || || || || ||||| | || || || ||||| | Sbjct 814578 CCTGGACCTC--CGTCATGAACCTGCCGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGC 814635 Query 127933 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCA 127992 || || || || || | | | | | ||| | || || | || | |||| || ||| Sbjct 814636 GGCGAAGAAGGCGAGCACGTGCGTGACGAAGTGCTTCTCGTCAGCGGTTAGGGCCTCCCA 814695 Query 127993 GTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTT 128052 || | |||||| | || ||||| || ||||| || |||||| | || || || Sbjct 814696 GTGGCGGAGATCTTGCGAAAGATCAACTTCCTCAGCGGTCCAAAACGACGCTTCGGCTTT 814755 Query 128053 CTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAACA 128093 ||| || | |||||| | || || |||| | ||||||| Sbjct 814756 CTTGTACATTTCCCAAATTTGTGGGTACTGAATCGGGAACA 814796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613310877696000