Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq18882 134 2e-26 >seq18882 Length=869960 Score = 134 bits (148), Expect = 2e-26 Identities = 457/704 (65%), Gaps = 15/704 (2%) Strand=Plus/Plus Query 159744 CCAGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCA 159803 ||| |||||| || || ||||| || ||||| || |||| || | || ||||||| Sbjct 814047 CCAACAACCTATCCGCGACAAACTCTATGTACTGACTCATCAATTCTCCATTCATCCCCA 814106 Query 159804 GCAGC-CTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTC 159862 || | | |||| ||||| || ||| |||||| |||| ||||| ||||| || || Sbjct 814107 CCAACGCGCACGGC-AGCGCATCGCACACAAACTCTCTCTCTATCTCCACCGCCTCCTTC 814165 Query 159863 ACAATCTGCGAGACACGTTCGTACCCCGGCTT-GCCCAAAATGTGGTCCTTAAACAGGAG 159921 || | | | || || || | | |||| | || ||| | | ||| || Sbjct 814166 ACTAACGCCTTCACGCGCTCCTCGCTTAGCTTCGTCCTCAATAAACT----ATACAACAG 814221 Query 159922 GCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAG 159981 ||||||||| |||||||| || ||||| || || ||||| |||||||| || | | | Sbjct 814222 GCACGCAAAATCGCAGTGGAGACCCTCATCTCGCGAGATCAACTCGTTTGAGAATGTTAA 814281 Query 159982 GCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAA 160040 |||||||| | ||| ||| |||||||||||| || | ||||||| | || | || | Sbjct 814282 TCCCGGCATTAACCCTCGCTTTTTGAGCCAAAATATCG-CGCAAAAACTCCCTGAGAAGA 814340 Query 160041 AGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCAT 160100 | |||||||||||| |||||||| | | ||||| | ||| | | | | | | Sbjct 814341 AAATCCCCTCCACGCAAGCAAACGCGATTAATCTCTCGGCGAAA---GTCTCCGAGCCGT 814397 Query 160101 GGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGT 160160 | |||| || ||||| || |||||||||| ||| || | |||| ||||| Sbjct 814398 CGATCCAATTTAACGCCCACGTGGCTTTCTTTGCGACGCAGGGAACCGTTTCGATGGCGT 814457 Query 160161 TAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACA 160220 ||| | | | || || | | ||||| ||| | | ||| |||||||| Sbjct 814458 GAAAGAGACGATTCTTTTCGTCGGAGTTTTTGATGTAAGTTTCTAGAAGCAGCGAGTACA 814517 Query 160221 TTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGAT 160280 |||| | ||| | || || ||||| || || ||| |||||| |||||| Sbjct 814518 TTTCGGAGTGGATGTTCTCAATGGCGATTTGGAAGCCGTAGAAGGCACGCGCCTCGGCGA 814577 Query 160281 ACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCG 160340 ||| |||||| ||||||| | || || | || | ||||||| ||| | Sbjct 814578 CCTGGACCTCCGTCATGAACCTGCCGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGCGG 814637 Query 160341 CAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCC 160400 | ||||| || | |||||| | || ||| || ||||||| | | || | |||| Sbjct 814638 CGAAGAAGGCGAGCACGTGCGTGACGAAGTGCTTCTCGTCAGCGGTTAGGGCC---TCCC 814694 Query 160401 AGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAA 160444 |||| | ||||| | | |||||| || || ||| ||||| Sbjct 814695 AGTGGCGGAGATCTTGCGAAAGATCAACTTCCTCAGCGGTCCAA 814738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794900750336000