Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq5781 127 3e-24
seq23040 95.1 2e-14
>seq5781
Length=108451
Score = 127 bits (140), Expect = 3e-24
Identities = 311/463 (67%), Gaps = 14/463 (3%)
Strand=Plus/Plus
Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAA 15976
|||||| || || | | || ||||| || || |||| ||||| || | |||||
Sbjct 97584 ATCAAGAATGTCCGCTCTGTTAGTTGCAGCAATCACAATGATACCAGTATTACCCTCAAA 97643
Query 15977 ACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 16036
||||||||| || |||||||||||||||| ||||| || | ||||||||| || | |
Sbjct 97644 ACCATCCATTTCCGTCAAAAGCTGGTTAAGGGTTTGCTCTCTCTCATCATTCCCT--CCT 97701
Query 16037 ACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094
| | |||| | | ||| |||| ||||||||||| ||||| | || || |||||
Sbjct 97702 CCAATTCCAGTTCCTCTTTGTCTTCCAACGGCATCAATTTCATCCACAAATACAATGCAA 97761
Query 16095 GGTTGATTTTC-GCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 16153
|| ||| || | | ||| ||| ||||| || || | || || ||||||||
Sbjct 97762 GGAGCATTCTCTTTGGCCTTCTTGAAA-AGATCTCGGACTCTAGATGCACCTACACCAAC 97820
Query 16154 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 16212
||||||||| ||||| | | | | | || | || || || ||| | |||||| |
Sbjct 97821 AAACATCTCAACAAACTCAGAACCTG-ATATGGAGAAAAATGGAACACCGGCTTCACCAG 97879
Query 16213 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTC 16272
|||| || ||| ||||||||||| || || ||||| ||| | || || ||||
Sbjct 97880 CAATTGCCTTGGCAAGAAGAGTCTTCCCGGTTCCTGGAGGACCAACTAGAAGAACACCCT 97939
Query 16273 GTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCT 16332
|||||| || ||| | |||||||||| | ||| || || ||||| |
Sbjct 97940 TTGGAATACGAGCTCCAACAGCTGTAAATCTCTCAGGCTTCTTGAGGAACTCCAC---CA 97996
Query 16333 CTTCC---AATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372
||||| || || | ||| || | |||| || |||||||
Sbjct 97997 CTTCCATGAAATCTTGTTTTGCTTCATCAACTCCGGCAACATC 98039
>seq23040
Length=7163423
Score = 95.1 bits (104), Expect = 2e-14
Identities = 155/219 (71%), Gaps = 16/219 (7%)
Strand=Plus/Plus
Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033
||| |||||||| || ||||||||||| |||||||| || || | |||||| || ||
Sbjct 911233 AAAGCCATCCATTTCAGTCAAAAGCTGATTAATAGTCTGCTCTCTTTCATCGTTTCCT-- 911290
Query 16034 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091
| | | | || || | | ||| | ||||| |||||||| |||||||| || || ||
Sbjct 911291 CCTCCAAGCCCTGCTCCTCTCTGCCTCCCCACAGCATCAATTTCATCAATAAACACAATA 911350
Query 16092 CATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCC 16145
||||| || ||| || | ||||| | ||||| ||| || | |||||
Sbjct 911351 CATGGCGCCTTCGATTTGGCCTTC----TCAAACAAATCCC--TCACTCTGGAAGCGCCA 911404
Query 16146 ACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 16184
||||||||||||| ||| ||||| | || ||| | ||||
Sbjct 911405 ACACCAACAAACAACTCGACAAACTCTGAGGCAGCACAT 911443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620543762432000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |