Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_015281.1 Length=179563 Score E Sequences producing significant alignments: (Bits) Value seq22333 625 3e-174 seq17466 540 1e-148 seq14178 221 1e-52 >seq22333 Length=1412734 Score = 625 bits (692), Expect = 3e-174 Identities = 733/988 (74%), Gaps = 2/988 (0%) Strand=Plus/Plus Query 167863 TTCTGCGAGTGGGTAACATCAACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 167922 ||||| | ||| |||| ||| | |||||||| || | |||||||| || || || Sbjct 733223 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 733282 Query 167923 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 167981 ||||| || ||| | ||| | |||||| ||||| || || |||||||| | |||||||| Sbjct 733283 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 733341 Query 167982 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 168041 || || || || ||||| || |||||||| || |||| || || | ||||| ||||| Sbjct 733342 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 733401 Query 168042 CATCATCTCTGGTGCAGTTGTCCCTTCTTCTAATGCTATTGGACTTCACTTCTATCCCAT 168101 || || |||||||| || | ||| ||||| ||||| || | || || || || || Sbjct 733402 TATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATCGGTTTGCATTTTTACCCGAT 733461 Query 168102 CTGGGAAGCAGCATCACTCGATGAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTAGT 168161 |||||||| ||||| | ||||| ||||| || || || ||||||| | ||| | || Sbjct 733462 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 733521 Query 168162 CTTTCACTTCCTCATCGGTATCTATGCATACATGGGACGTGAATGGGAACTTTCATATCG 168221 | |||||| | | ||| | | |||||||| ||||| ||||||||| | || Sbjct 733522 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 733581 Query 168222 TTTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTGC 168281 | | ||||||||||| ||||| ||||||||| || || || || || |||||| ||| Sbjct 733582 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCTGC 733641 Query 168282 AGTATTCCTAGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAAT 168341 || ||| | | || || |||||||||| ||||| ||||||| ||||| || ||||| Sbjct 733642 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 733701 Query 168342 CTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCC 168401 ||| || || ||||||| |||| | || ||||| ||||||||||| || || ||||| || Sbjct 733702 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 733761 Query 168402 CTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGG 168461 ||||| ||| | ||||| ||||| ||||| || ||| | || ||||||||||| || Sbjct 733762 ATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 733821 Query 168462 AAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGG 168521 ||||| || ||| | | | || || || || |||| ||||| || | || Sbjct 733822 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 733881 Query 168522 TTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGG 168581 ||||| ||||| ||||| |||||||| || || |||||||| ||||| ||||| || || Sbjct 733882 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGG 733941 Query 168582 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGC 168641 || |||||||||||||| ||| |||||||| || || || || || |||||||| || Sbjct 733942 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGC 734001 Query 168642 TGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAA 168701 ||| |||||||| || || ||||||||||| || | || | ||| ||||| ||||| Sbjct 734002 TGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAA 734061 Query 168702 CCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 168761 ||| || |||||||| |||||||| || | ||||| |||| |||||||| | || || Sbjct 734062 CCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 734121 Query 168762 CTGGGCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 168821 |||||| ||| || | || || ||| || |||||||||||||||||||| ||||| || Sbjct 734122 CTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 734181 Query 168822 ACACAACTTCCCACTCGATCTTGCTGCT 168849 || |||||||| || || || |||||| Sbjct 734182 TCATAACTTCCCTCTAGACCTAGCTGCT 734209 Score = 291 bits (322), Expect = 9e-74 Identities = 322/429 (75%), Gaps = 0/429 (0%) Strand=Plus/Plus Query 168421 GCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCT 168480 ||||| ||||| || ||| | || ||||||||||| || ||||| || ||| | Sbjct 732403 GCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAAT 732462 Query 168481 CTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAA 168540 | | || || || || |||| |||| || | ||||||| ||||| ||||| Sbjct 732463 TTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAG 732522 Query 168541 GAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATAC 168600 |||||||| || || |||||||| ||||| ||||| || || || |||||||||||||| Sbjct 732523 GAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATAT 732582 Query 168601 GCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGC 168660 ||| |||||||| || || || || || |||||||| ||||| |||||||| || || Sbjct 732583 GCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGGT 732642 Query 168661 ATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTC 168720 ||||||||||| || | || | ||| ||||| |||||||| || |||||||| ||| Sbjct 732643 ATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTC 732702 Query 168721 AACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTGAAC 168780 ||||| || | ||||| |||| |||||||| | || |||||||| ||| || | || Sbjct 732703 AACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAAT 732762 Query 168781 CGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGAT 168840 || ||| || |||||||||||||||||||| ||||| || || |||||||| || || Sbjct 732763 CGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGAC 732822 Query 168841 CTTGCTGCT 168849 || |||||| Sbjct 732823 CTAGCTGCT 732831 >seq17466 Length=9900 Score = 540 bits (598), Expect = 1e-148 Identities = 730/1016 (72%), Gaps = 6/1016 (1%) Strand=Plus/Minus Query 169307 TTCGATGTTCTCGATGACTGGCTCAAACGCGACCGCTTTGTATTCATTGGTTGGTCTGGT 169366 || ||| || | || |||||| | | | ||||| || || || | || ||||| || Sbjct 1111 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 1052 Query 169367 CTACTTCTTCTTCCCACTGCCTATCTTGCTATTGGAGGGTGGCTCACTGGTACAGCGTTT 169426 ||| | || |||| ||| ||| | ||| | || || ||| | || || || | ||| Sbjct 1051 CTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTT 992 Query 169427 GTTACTTCCTGGTACACCCACGGACTCGCTTCCAGTTACT---TAGAAGGCGCTAACTTC 169483 || ||||| ||||| ||||| ||| | ||| |||| || | ||||| || ||| Sbjct 991 GTAACTTCTTGGTATACCCATGGATTGGCT---AGTTCCTATTTGGAAGGTTGCAATTTC 935 Query 169484 CTCACTGCTGCTGTCAGTACACCTGCTGACGCTATGGGACACTCACTGCTCTTGCTATGG 169543 | || || || || || ||||| | | | | |||||| || | | |||||| Sbjct 934 TTAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGG 875 Query 169544 GGTCCAGAAGCACAAGGCGATTTCGTTCGCTGGTGTCAATTGGGTGGTCTCTGGAACTTT 169603 || || |||||||| || ||||| ||| ||||||||||| |||||||| |||| ||| Sbjct 874 GGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTT 815 Query 169604 GTAGCACTTCATGGTGCATTTGCATTGATTGGTTTCATGCTTAGGCAGTTTGAATTGGCA 169663 || || || ||||| || |||||| | || ||||||||| | | || |||||| | || Sbjct 814 GTCGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCT 755 Query 169664 CGTCTTATTGGCATCCGTCCTTATAATGCTATTGCATTCTCTGGTCCTATTGCTGTATTT 169723 || | || | || ||||||||||| ||| ||||||||||||| || || || ||| Sbjct 754 CGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTT 695 Query 169724 GTCAGTGTCTTTCTTATCTACCCACTTGGACAGTCCTCATGGTTCTTTGCTCCCTCCTTT 169783 || || || ||||| || ||||| ||||| || ||||||||||| || ||| Sbjct 694 GTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTT 635 Query 169784 GGAGTATCAGCAATCTTCAGGTTCCTGTTGTTCCTGCAAGGATTCCACAACTGGACGTTG 169843 || ||| |||| || || | || | | ||| | |||||||| || || ||||||||| Sbjct 634 GGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTG 575 Query 169844 AATCCATTCCACATGATGGGTGTAGCAGGAATCTTGGGCGGAGCATTGCTTTCTGCTATC 169903 || ||||| || |||||||| || || ||| | || |||| ||| |||| | |||||| Sbjct 574 AACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATC 515 Query 169904 CATGGTGTTACAGTAGAGAACACATTGTATGAAGACGGTGAGCAGGCAAATACTTTCAAG 169963 ||||| | ||| ||||| ||||| | | ||||| ||||| |||||||| ||| Sbjct 514 CATGGGGCTACCGTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGC 455 Query 169964 GCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 170023 || ||| | | || || | ||||| |||||||| ||||||||||| |||||||| ||| Sbjct 454 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGG 395 Query 170024 TCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGTTGGCTTCATTTTTTCATGTTGTTT 170083 || || ||||| ||| |||| ||||| || || |||||| | ||||| || ||| | ||| Sbjct 394 TCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTT 335 Query 170084 GTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTT 170143 || || || | ||| | |||| |||||||| | ||||||| ||||| || || Sbjct 334 GTACCCGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTA 275 Query 170144 CGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACC 170203 ||||| || || ||||| ||||| ||| | ||||| |||||||| ||||||||||| Sbjct 274 CGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACT 215 Query 170204 TTCTACACCAAAAACATCCTATTGAATGAAGGACTTCGTGCATGGTTGGCACCTGCTGAT 170263 |||||||||||||| || || || || || || ||||||| ||| ||||| || ||| Sbjct 214 TTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGAT 155 Query 170264 CAACCACATGAAAACTTCATCTTCCCAGAAGAAGTTCTTCCGAGAGGTAACGCACT 170319 || || |||||||| | || ||||| || || ||||| || | || ||||| || Sbjct 154 CAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 99 Score = 376 bits (416), Expect = 3e-99 Identities = 426/571 (75%), Gaps = 0/571 (0%) Strand=Plus/Plus Query 168279 TGCAGTATTCCTAGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGG 168338 ||| || ||| | | |||||| | |||||||| ||||||||||||| ||||| | || Sbjct 9177 TGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 9236 Query 168339 AATCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCA 168398 ||| || || || ||||||| ||| | || ||||| || |||||||| || || ||||| Sbjct 9237 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCA 9296 Query 168399 TCCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCA 168458 ||| || || ||| | || || ||||| ||||| || || | || ||||||||||| Sbjct 9297 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 9356 Query 168459 CGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTA 168518 || ||||| || ||| | | | || || || ||||||| || || || | Sbjct 9357 TGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGA 9416 Query 168519 CGGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTT 168578 |||||||| || || ||||||||||| || || ||||| || || ||||| ||||| || Sbjct 9417 GGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTT 9476 Query 168579 CGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCT 168638 ||||| || ||||||||||| ||| ||||||||||| || || || ||||||||| | Sbjct 9477 TGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTT 9536 Query 168639 TGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATT 168698 ||||| |||||||| || || ||||||||||| || | || | || |||||||| Sbjct 9537 GGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATT 9596 Query 168699 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 168758 |||||| || || ||||| |||||||| || | ||||| |||| ||||| || | || Sbjct 9597 CAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAA 9656 Query 168759 CACCTGGGCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAA 168818 || ||||| ||| | | ||||| ||| ||| ||||||||||| ||||| || ||||| Sbjct 9657 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 9716 Query 168819 CGCACACAACTTCCCACTCGATCTTGCTGCT 168849 || ||||||||||| || || || |||||| Sbjct 9717 TGCTCACAACTTCCCTCTAGACCTAGCTGCT 9747 >seq14178 Length=3042336 Score = 221 bits (244), Expect = 1e-52 Identities = 292/404 (72%), Gaps = 12/404 (3%) Strand=Plus/Minus Query 168448 AGTGCTATGCACGGAAGTTTGGTTA-CTTCTTCTCTCGTTAGAGAGACGACTGAAACCGA 168506 ||||||||||| || ||||||| | ||| | | | || || || || ||| || Sbjct 2899486 AGTGCTATGCATGGTTCCTTGGTTAACCTCTAGTTTGATCAGGGAAACCACATAAAATGA 2899427 Query 168507 ATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGC 168566 ||| || | ||||||| ||||| ||||| |||||||| || || |||||||| || Sbjct 2899426 ATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGC 2899367 Query 168567 TCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTT 168626 | | ||||| || || | |||||||||||||| ||| ||||||| || || || || Sbjct 2899366 TTACGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTT 2899307 Query 168627 GCACTTCTTCCTTGCTGCAT-GGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCT 168685 || |||||||| ||||| | ||||||| || || ||||||||||| || | || | Sbjct 2899306 ACATTTCTTCCTGGCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTA 2899247 Query 168686 CCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGG 168745 ||| || || | |||||| || |||||||| |||||||| || | ||| | Sbjct 2899246 GCACTATAGCTTGCAACCTAAATGGTTTCAATTTCAACCAATCTA----------TCAAG 2899197 Query 168746 GTCGTGTGTTGAACACCTGGGCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTA 168805 ||||||| | || |||||||| ||| || | || || ||| || |||| |||||||| Sbjct 2899196 GTCGTGTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTA 2899137 Query 168806 TGCATGAGCGTAACGCACACAACTTCCCACTCGATCTTGCTGCT 168849 ||||||| ||||| | || |||||||| || || || |||||| Sbjct 2899136 TGCATGAACGTAAAGGTCATAACTTCCCTCTAGACCTAGCTGCT 2899093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574289768448000