Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_015283.1
Length=176428
Score E
Sequences producing significant alignments: (Bits) Value
seq22333 587 9e-163
seq17466 396 3e-105
seq14178 172 6e-38
>seq22333
Length=1412734
Score = 587 bits (650), Expect = 9e-163
Identities = 722/984 (73%), Gaps = 2/984 (0%)
Strand=Plus/Plus
Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550
||||| | ||| |||| |||||| | ||| | ||||| |||||||||| ||||| ||
Sbjct 733223 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 733282
Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609
|||||||| |||||| || ||| | | ||| || ||| | || || |||||||| ||
Sbjct 733283 ATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATTGCTGCTCC 733341
Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669
|| || ||||| ||||| || | |||||||| | || ||||| | |||||||||||
Sbjct 733342 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 733401
Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729
|| || || ||||| || |||| |||| || |||||| | || || ||||| ||
Sbjct 733402 TATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATCGGTTTGCATTTTTACCCGAT 733461
Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789
|||||||| || | | ||||| |||||||| ||||| |||||||| || | | |
Sbjct 733462 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 733521
Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAG 168849
| |||||| || | || | || ||||||||| | |||||||| | | | |
Sbjct 733522 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 733581
Query 168850 ACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGC 168909
|| |||||| | |||||||| |||||| |||||||| || || | ||||| |||
Sbjct 733582 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCTGC 733641
Query 168910 AGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAAT 168969
|| ||| | | |||||| | ||||| || ||| |||||||||||||||||||||||
Sbjct 733642 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 733701
Query 168970 TTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCC 169029
||||| || |||||||||||| | |||||||| || ||||||||||| |||||||| ||
Sbjct 733702 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 733761
Query 169030 CTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGG 169089
||||| ||| ||| ||||| ||| | ||||| || || |||||| || ||||||||
Sbjct 733762 ATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 733821
Query 169090 TTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGG 169149
||| | ||||| ||| | | ||||| || || || || | |||||| || | ||
Sbjct 733822 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 733881
Query 169150 TTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGG 169209
||||| ||||||||||| |||||||| |||||||| || || || || || || || ||
Sbjct 733882 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGG 733941
Query 169210 TAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 169269
|||| |||||||| ||||| ||||||||||| || | | | || |||||||| ||
Sbjct 733942 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGC 734001
Query 169270 AGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 169329
| | || || ||| || | ||||| || || | ||||| | || ||||| |||||
Sbjct 734002 TGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAA 734061
Query 169330 CTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTAC 169389
| | || || || || || |||||||| || || ||| | | ||| | ||| |||
Sbjct 734062 CCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 734121
Query 169390 ATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 169449
|||| ||| | |||| | || ||||||||||||||||| |||||||| ||||| ||
Sbjct 734122 CTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 734181
Query 169450 TCACAACTTCCCACTAGACTTAGC 169473
||| |||||||| |||||| ||||
Sbjct 734182 TCATAACTTCCCTCTAGACCTAGC 734205
Score = 248 bits (274), Expect = 1e-60
Identities = 311/427 (73%), Gaps = 0/427 (0%)
Strand=Plus/Plus
Query 169047 TAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTT 169106
|||| ||| | ||||| || || |||||| || ||||||||||| | ||||| |||
Sbjct 732401 TAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTA 732460
Query 169107 CTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAG 169166
| | ||||| || || || || | ||||| || | ||||||| ||||||||||
Sbjct 732461 ATTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTCAAG 732520
Query 169167 AAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGT 169226
| |||||||| |||||||| || || || || || || || || |||| |||||||| |
Sbjct 732521 AGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAAT 732580
Query 169227 ATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTAT 169286
|||| ||||||||||| || | | | || |||||||| || | | || || |||
Sbjct 732581 ATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAG 732640
Query 169287 GTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTAACT 169346
|| | ||||| || || | ||||| | || ||||| |||||| | || || || || |
Sbjct 732641 GTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATT 732700
Query 169347 TTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTACTTA 169406
| |||||||| || || ||| | | ||| | ||| ||| |||| ||| | |||
Sbjct 732701 TCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTA 732760
Query 169407 ACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCACTAG 169466
| | || ||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||
Sbjct 732761 ATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAG 732820
Query 169467 ACTTAGC 169473
|| ||||
Sbjct 732821 ACCTAGC 732827
>seq17466
Length=9900
Score = 396 bits (438), Expect = 3e-105
Identities = 428/567 (75%), Gaps = 0/567 (0%)
Strand=Plus/Plus
Query 168907 TGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGG 168966
||| || ||| | | || || ||||||| || ||||||||||||||||||| ||||
Sbjct 9177 TGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 9236
Query 168967 AATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCA 169026
||| ||||| || |||||||| ||| | |||||||| || ||||||||||| ||||||||
Sbjct 9237 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCA 9296
Query 169027 TCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCA 169086
||| || || ||| ||| ||||| ||| | ||||| || || |||||| || |||||
Sbjct 9297 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 9356
Query 169087 TGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTA 169146
|||||| | ||||| ||| | | ||||| || || ||||| | || ||| || |
Sbjct 9357 TGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGA 9416
Query 169147 TGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTT 169206
|||||||| || |||||||||||||| || ||||| ||||| || || || || || ||
Sbjct 9417 GGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTT 9476
Query 169207 CGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCT 169266
||| ||||||||||||| ||||| |||||||||||||| | | | ||||||||| |
Sbjct 9477 TGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTT 9536
Query 169267 AGCAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATT 169326
|| | | || || ||| | | ||||| || || | ||||| |||| ||||||||
Sbjct 9537 GGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATT 9596
Query 169327 CAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCC 169386
|||| | || ||||| || || |||||||| || || ||| | | ||| | |||
Sbjct 9597 CAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAA 9656
Query 169387 TACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAA 169446
||| |||| ||| | | ||| | || || |||||||||||||||||||| || |||||
Sbjct 9657 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 9716
Query 169447 CGCTCACAACTTCCCACTAGACTTAGC 169473
|||||||||||||| |||||| ||||
Sbjct 9717 TGCTCACAACTTCCCTCTAGACCTAGC 9743
Score = 159 bits (176), Expect = 4e-34
Identities = 244/348 (70%), Gaps = 0/348 (0%)
Strand=Plus/Plus
Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550
|||||| | ||| |||| ||||| | ||| | ||||| | || ||||||||||| ||
Sbjct 8818 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 8877
Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCA 168610
|||||||| ||||| || ||| | | || ||| | || || || ||||| ||
Sbjct 8878 ATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCT 8937
Query 168611 CCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAAC 168670
|| || ||||| || || || | || ||||| | ||| || || | |||||||||||
Sbjct 8938 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAAT 8997
Query 168671 ATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATT 168730
|| || || ||||| || |||| |||| || ||||| | || || |||||||||
Sbjct 8998 ATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATT 9057
Query 168731 TGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATC 168790
|||||||| || | | ||||| |||||||| ||||| |||||||| || | | |
Sbjct 9058 TGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 9117
Query 168791 TTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA 168838
| |||||| || | || | || || |||||| | ||||||||
Sbjct 9118 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAA 9165
>seq14178
Length=3042336
Score = 172 bits (190), Expect = 6e-38
Identities = 279/398 (70%), Gaps = 14/398 (4%)
Strand=Plus/Minus
Query 169079 GCAATGCATGGTTCACTTG--TAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAAT 169136
|| ||||||||||| |||| |||| ||| | | ||||| || || || | | ||||
Sbjct 2899483 GCTATGCATGGTTC-CTTGGTTAACCTCTAGTTTGATCAGGGAAACCACATAAAATGAAT 2899425
Query 169137 CTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCAC 169196
|| || | ||||||| ||||||||||| |||||||| |||||||| || || ||
Sbjct 2899424 CTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTT 2899365
Query 169197 ATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTC 169256
| || || || || |||| |||||||| ||||| ||| ||||||| || | | | |
Sbjct 2899364 ACGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTAC 2899305
Query 169257 ACTTCTTCCTAGCAG-TGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGT 169315
| |||||||| || | | || || ||| || | ||||| || || ||||||| |
Sbjct 2899304 ATTTCTTCCTGGCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTAGC 2899245
Query 169316 ACAATGGCATTCAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGT 169375
|| || || | |||| | || || || || || |||||||| || | | |||
Sbjct 2899244 ACTATAGCTTGCAACCTAAATGGTTTCAATTTCAACCAATC-----TA-----TCAAGGT 2899195
Query 169376 AAGATCATTCCTACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATG 169435
| ||| ||| |||| ||| | |||| | || ||||| |||| |||||| |||
Sbjct 2899194 CGTGTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATG 2899135
Query 169436 CATGAGCGTAACGCTCACAACTTCCCACTAGACTTAGC 169473
||||| ||||| | ||| |||||||| |||||| ||||
Sbjct 2899134 CATGAACGTAAAGGTCATAACTTCCCTCTAGACCTAGC 2899097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564260978688000
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