Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq22333 587 9e-163 seq17466 396 3e-105 seq14178 172 6e-38 >seq22333 Length=1412734 Score = 587 bits (650), Expect = 9e-163 Identities = 722/984 (73%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | ||| | ||||| |||||||||| ||||| || Sbjct 733223 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 733282 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| |||||| || ||| | | ||| || ||| | || || |||||||| || Sbjct 733283 ATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATTGCTGCTCC 733341 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || ||||| ||||| || | |||||||| | || ||||| | ||||||||||| Sbjct 733342 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 733401 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || || || ||||| || |||| |||| || |||||| | || || ||||| || Sbjct 733402 TATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATCGGTTTGCATTTTTACCCGAT 733461 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||| || | | ||||| |||||||| ||||| |||||||| || | | | Sbjct 733462 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 733521 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAG 168849 | |||||| || | || | || ||||||||| | |||||||| | | | | Sbjct 733522 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 733581 Query 168850 ACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGC 168909 || |||||| | |||||||| |||||| |||||||| || || | ||||| ||| Sbjct 733582 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCTGC 733641 Query 168910 AGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAAT 168969 || ||| | | |||||| | ||||| || ||| ||||||||||||||||||||||| Sbjct 733642 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 733701 Query 168970 TTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCC 169029 ||||| || |||||||||||| | |||||||| || ||||||||||| |||||||| || Sbjct 733702 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 733761 Query 169030 CTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGG 169089 ||||| ||| ||| ||||| ||| | ||||| || || |||||| || |||||||| Sbjct 733762 ATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 733821 Query 169090 TTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGG 169149 ||| | ||||| ||| | | ||||| || || || || | |||||| || | || Sbjct 733822 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 733881 Query 169150 TTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGG 169209 ||||| ||||||||||| |||||||| |||||||| || || || || || || || || Sbjct 733882 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGG 733941 Query 169210 TAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 169269 |||| |||||||| ||||| ||||||||||| || | | | || |||||||| || Sbjct 733942 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGC 734001 Query 169270 AGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 169329 | | || || ||| || | ||||| || || | ||||| | || ||||| ||||| Sbjct 734002 TGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAA 734061 Query 169330 CTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTAC 169389 | | || || || || || |||||||| || || ||| | | ||| | ||| ||| Sbjct 734062 CCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 734121 Query 169390 ATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 169449 |||| ||| | |||| | || ||||||||||||||||| |||||||| ||||| || Sbjct 734122 CTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 734181 Query 169450 TCACAACTTCCCACTAGACTTAGC 169473 ||| |||||||| |||||| |||| Sbjct 734182 TCATAACTTCCCTCTAGACCTAGC 734205 Score = 248 bits (274), Expect = 1e-60 Identities = 311/427 (73%), Gaps = 0/427 (0%) Strand=Plus/Plus Query 169047 TAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTT 169106 |||| ||| | ||||| || || |||||| || ||||||||||| | ||||| ||| Sbjct 732401 TAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTA 732460 Query 169107 CTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAG 169166 | | ||||| || || || || | ||||| || | ||||||| |||||||||| Sbjct 732461 ATTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTCAAG 732520 Query 169167 AAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGT 169226 | |||||||| |||||||| || || || || || || || || |||| |||||||| | Sbjct 732521 AGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAAT 732580 Query 169227 ATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTAT 169286 |||| ||||||||||| || | | | || |||||||| || | | || || ||| Sbjct 732581 ATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAG 732640 Query 169287 GTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTAACT 169346 || | ||||| || || | ||||| | || ||||| |||||| | || || || || | Sbjct 732641 GTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATT 732700 Query 169347 TTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTACTTA 169406 | |||||||| || || ||| | | ||| | ||| ||| |||| ||| | ||| Sbjct 732701 TCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTA 732760 Query 169407 ACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCACTAG 169466 | | || ||||||||||||||||| |||||||| ||||| ||||| |||||||| |||| Sbjct 732761 ATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAG 732820 Query 169467 ACTTAGC 169473 || |||| Sbjct 732821 ACCTAGC 732827 >seq17466 Length=9900 Score = 396 bits (438), Expect = 3e-105 Identities = 428/567 (75%), Gaps = 0/567 (0%) Strand=Plus/Plus Query 168907 TGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGG 168966 ||| || ||| | | || || ||||||| || ||||||||||||||||||| |||| Sbjct 9177 TGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 9236 Query 168967 AATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCA 169026 ||| ||||| || |||||||| ||| | |||||||| || ||||||||||| |||||||| Sbjct 9237 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCA 9296 Query 169027 TCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCA 169086 ||| || || ||| ||| ||||| ||| | ||||| || || |||||| || ||||| Sbjct 9297 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 9356 Query 169087 TGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTA 169146 |||||| | ||||| ||| | | ||||| || || ||||| | || ||| || | Sbjct 9357 TGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGA 9416 Query 169147 TGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTT 169206 |||||||| || |||||||||||||| || ||||| ||||| || || || || || || Sbjct 9417 GGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTT 9476 Query 169207 CGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCT 169266 ||| ||||||||||||| ||||| |||||||||||||| | | | ||||||||| | Sbjct 9477 TGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTT 9536 Query 169267 AGCAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATT 169326 || | | || || ||| | | ||||| || || | ||||| |||| |||||||| Sbjct 9537 GGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATT 9596 Query 169327 CAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCC 169386 |||| | || ||||| || || |||||||| || || ||| | | ||| | ||| Sbjct 9597 CAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAA 9656 Query 169387 TACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAA 169446 ||| |||| ||| | | ||| | || || |||||||||||||||||||| || ||||| Sbjct 9657 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 9716 Query 169447 CGCTCACAACTTCCCACTAGACTTAGC 169473 |||||||||||||| |||||| |||| Sbjct 9717 TGCTCACAACTTCCCTCTAGACCTAGC 9743 Score = 159 bits (176), Expect = 4e-34 Identities = 244/348 (70%), Gaps = 0/348 (0%) Strand=Plus/Plus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 |||||| | ||| |||| ||||| | ||| | ||||| | || ||||||||||| || Sbjct 8818 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 8877 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCA 168610 |||||||| ||||| || ||| | | || ||| | || || || ||||| || Sbjct 8878 ATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCT 8937 Query 168611 CCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAAC 168670 || || ||||| || || || | || ||||| | ||| || || | ||||||||||| Sbjct 8938 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAAT 8997 Query 168671 ATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATT 168730 || || || ||||| || |||| |||| || ||||| | || || ||||||||| Sbjct 8998 ATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATT 9057 Query 168731 TGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATC 168790 |||||||| || | | ||||| |||||||| ||||| |||||||| || | | | Sbjct 9058 TGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 9117 Query 168791 TTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA 168838 | |||||| || | || | || || |||||| | |||||||| Sbjct 9118 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAA 9165 >seq14178 Length=3042336 Score = 172 bits (190), Expect = 6e-38 Identities = 279/398 (70%), Gaps = 14/398 (4%) Strand=Plus/Minus Query 169079 GCAATGCATGGTTCACTTG--TAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAAT 169136 || ||||||||||| |||| |||| ||| | | ||||| || || || | | |||| Sbjct 2899483 GCTATGCATGGTTC-CTTGGTTAACCTCTAGTTTGATCAGGGAAACCACATAAAATGAAT 2899425 Query 169137 CTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCAC 169196 || || | ||||||| ||||||||||| |||||||| |||||||| || || || Sbjct 2899424 CTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTT 2899365 Query 169197 ATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTC 169256 | || || || || |||| |||||||| ||||| ||| ||||||| || | | | | Sbjct 2899364 ACGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTAC 2899305 Query 169257 ACTTCTTCCTAGCAG-TGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGT 169315 | |||||||| || | | || || ||| || | ||||| || || ||||||| | Sbjct 2899304 ATTTCTTCCTGGCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTAGC 2899245 Query 169316 ACAATGGCATTCAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGT 169375 || || || | |||| | || || || || || |||||||| || | | ||| Sbjct 2899244 ACTATAGCTTGCAACCTAAATGGTTTCAATTTCAACCAATC-----TA-----TCAAGGT 2899195 Query 169376 AAGATCATTCCTACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATG 169435 | ||| ||| |||| ||| | |||| | || ||||| |||| |||||| ||| Sbjct 2899194 CGTGTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATG 2899135 Query 169436 CATGAGCGTAACGCTCACAACTTCCCACTAGACTTAGC 169473 ||||| ||||| | ||| |||||||| |||||| |||| Sbjct 2899134 CATGAACGTAAAGGTCATAACTTCCCTCTAGACCTAGC 2899097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564260978688000