Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq22333 542 4e-149 seq17466 369 5e-97 seq14178 165 1e-35 >seq22333 Length=1412734 Score = 542 bits (600), Expect = 4e-149 Identities = 716/993 (72%), Gaps = 0/993 (0%) Strand=Plus/Plus Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353 || ||| | ||| | ||| ||||| || || | ||| |||||||||||||||| | Sbjct 733223 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 733282 Query 215354 ATGATTCCTTGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCT 215413 ||||| ||| | | | || || || || || | || ||||| ||||| ||| Sbjct 733283 ATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCT 733342 Query 215414 CCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAAC 215473 || || ||||| ||||| || | || || ||| |||| ||| || | ||||| ||||| Sbjct 733343 CCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAAT 733402 Query 215474 ATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATC 215533 || || |||||||| || | |||| ||| || ||||| || || || ||||| || Sbjct 733403 ATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATCGGTTTGCATTTTTACCCGATA 733462 Query 215534 TGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATC 215593 |||||||| ||| | ||||| |||||| | |||||||| || |||| | || || | Sbjct 733463 TGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 733522 Query 215594 TTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGA 215653 | |||||| | ||||| | || ||| || | ||||||||||| || | | Sbjct 733523 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 733582 Query 215654 TTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCA 215713 | |||||| | |||||||| |||||| || || || ||||| | || || ||| Sbjct 733583 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCTGCT 733642 Query 215714 GTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATC 215773 || ||| | | || ||| ||||||| || ||| ||||||| |||||| || |||||| Sbjct 733643 GTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 733702 Query 215774 TCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCA 215833 ||||| || ||||||| |||| |||| |||||||||||||||||||| || ||||||||| Sbjct 733703 TCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 733762 Query 215834 TTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGT 215893 |||||||||||||| || |||||||| ||||| || || | ||| ||| ||||| ||| Sbjct 733763 TTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 733822 Query 215894 TCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGT 215953 || | || || ||| | | ||||| || || || || | |||||| || | ||| Sbjct 733823 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 733882 Query 215954 TACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGT 216013 |||| ||||| |||||||| ||||| || || ||||||||||| |||||||| ||||| Sbjct 733883 TACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGC 733942 Query 216014 CGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCA 216073 || | ||||||||||| || ||||||||| || | | | || |||||||| || Sbjct 733943 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCT 734002 Query 216074 GCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAAC 216133 || | ||||| | |||||||| ||||| | ||| | |||||||| |||||| Sbjct 734003 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAAC 734062 Query 216134 CTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACT 216193 || || |||||||| |||||||| ||||| || || ||| || ||| ||| Sbjct 734063 CTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC 734122 Query 216194 TGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCT 216253 ||||| || || |||| | || |||||||||||||| ||||| || ||||| ||| Sbjct 734123 TGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 734182 Query 216254 CACAACTTCCCATTAGACTTGGCTGCTGCTGAA 216286 || |||||||| ||||| | |||||| |||| Sbjct 734183 CATAACTTCCCTCTAGACCTAGCTGCTATTGAA 734215 Score = 235 bits (260), Expect = 8e-57 Identities = 313/435 (72%), Gaps = 0/435 (0%) Strand=Plus/Plus Query 215852 GCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCT 215911 |||||||| ||||| || || | ||| ||| ||||| ||||| | || || ||| | Sbjct 732403 GCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAAT 732462 Query 215912 CTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAG 215971 | ||||| || || || || | ||||| || | ||||||| ||||| |||||| Sbjct 732463 TTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAG 732522 Query 215972 GAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATAC 216031 || ||||| || || ||||||||||| |||||||| ||||| || | ||||||||||| Sbjct 732523 GAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATAT 732582 Query 216032 GCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGT 216091 || ||||||||| || | | | || |||||||| || || | ||||| | || Sbjct 732583 GCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGGT 732642 Query 216092 ATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTC 216151 |||||| ||||| | ||| | |||||||| |||||||| || |||||||| ||| Sbjct 732643 ATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTC 732702 Query 216152 AACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAAC 216211 ||||| ||||| || || ||| || ||| ||| ||||| || || |||| Sbjct 732703 AACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAAT 732762 Query 216212 AGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGAC 216271 | || |||||||||||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct 732763 CGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGAC 732822 Query 216272 TTGGCTGCTGCTGAA 216286 | |||||| |||| Sbjct 732823 CTAGCTGCTATTGAA 732837 >seq17466 Length=9900 Score = 369 bits (408), Expect = 5e-97 Identities = 428/577 (74%), Gaps = 0/577 (0%) Strand=Plus/Plus Query 215710 TGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGG 215769 ||| || ||| | | ||||| | ||||| || ||||||||||| |||||| | || Sbjct 9177 TGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 9236 Query 215770 AATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCA 215829 ||| ||||| || ||||||| ||| |||| |||||||| ||||||||||| || ||||| Sbjct 9237 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCA 9296 Query 215830 CCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCA 215889 ||||| |||||||||||||| |||||||| ||||| ||||| | ||| ||| ||||| Sbjct 9297 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 9356 Query 215890 CGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTA 215949 ||||| | || || ||| | | ||||| || || ||||| | || ||| || | Sbjct 9357 TGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGA 9416 Query 215950 CGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTT 216009 |||||||| || || ||||| || || || || ||||| || ||||| |||||||| || Sbjct 9417 GGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTT 9476 Query 216010 TGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCT 216069 |||||| | ||||||||||| || |||||||||||| | | | ||||||||| | Sbjct 9477 TGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTT 9536 Query 216070 TGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTT 216129 || || | ||||| | | |||||| ||||| | ||| | |||||||| || Sbjct 9537 GGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATT 9596 Query 216130 CAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCC 216189 |||||| || || ||||| |||||||| ||||| || || ||| |||||| Sbjct 9597 CAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAA 9656 Query 216190 TACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAA 216249 ||||||||| || | | ||| | || ||||||||||||||||||||||| ||||| Sbjct 9657 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 9716 Query 216250 CGCTCACAACTTCCCATTAGACTTGGCTGCTGCTGAA 216286 |||||||||||||| ||||| | |||||| |||| Sbjct 9717 TGCTCACAACTTCCCTCTAGACCTAGCTGCTCTTGAA 9753 Score = 156 bits (172), Expect = 6e-33 Identities = 196/268 (73%), Gaps = 6/268 (2%) Strand=Plus/Plus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCT---C 215371 || || || ||| | ||| | || ||||| ||||| | ||||| ||| | | | | Sbjct 8839 ACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 8898 Query 215372 GCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGA 215431 ||| || || | | | |||| | ||||||||||| ||||| || ||||| || || Sbjct 8899 GCAACTTCCGTATTTATTATCG---CCTTCATCGCTGCTCCTCCAGTAGATATTGATGGT 8955 Query 215432 ATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTT 215491 || | ||||| ||| ||||||||||| | ||||| ||||| || || ||||||||| || Sbjct 8956 ATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATT 9015 Query 215492 GTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTT 215551 | |||| ||| || |||||||| || || ||||| || |||||||| ||| | ||| Sbjct 9016 ATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTT 9075 Query 215552 GACGAATGGCTCTACAATGGTGGACCTT 215579 || |||||| | |||||||| || |||| Sbjct 9076 GATGAATGGTTATACAATGGCGGTCCTT 9103 >seq14178 Length=3042336 Score = 165 bits (182), Expect = 1e-35 Identities = 282/408 (69%), Gaps = 12/408 (3%) Strand=Plus/Minus Query 215881 TGCAATGCACGGTTCACTTGTTA-CATCTTCTCTAATCAGAGAGACAACTGAGCAAGAAT 215939 ||| ||||| ||||| | |||| | ||| | | ||||| || || || | | |||| Sbjct 2899484 TGCTATGCATGGTTCCTTGGTTAACCTCTAGTTTGATCAGGGAAACCACATAAAATGAAT 2899425 Query 215940 CTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCAC 215999 || || | ||||||| ||||| |||||||| ||||| || || ||||||||||| Sbjct 2899424 CTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTT 2899365 Query 216000 ACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTC 216059 ||||||| ||||| | | ||||||||||| || | ||||||| || | | | | Sbjct 2899364 ACGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTAC 2899305 Query 216060 ACTTCTTCCTTGCAGCAT-TCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCA 216118 | |||||||| || || | ||||| | |||||||| ||||| ||||| | Sbjct 2899304 ATTTCTTCCTGGCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTAGC 2899245 Query 216119 ACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGT 216178 ||||| || | |||||| || |||||||| |||||||| ||| || ||| Sbjct 2899244 ACTATAGCTTGCAACCTAAATGGTTTCAATTTCAACCAATCTATC----------AAGGT 2899195 Query 216179 AAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATG 216238 || ||| ||| ||||| || || |||| | || || |||| |||||| ||| Sbjct 2899194 CGTGTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATG 2899135 Query 216239 CACGAGCGTAACGCTCACAACTTCCCATTAGACTTGGCTGCTGCTGAA 216286 || || ||||| | ||| |||||||| ||||| | |||||| |||| Sbjct 2899134 CATGAACGTAAAGGTCATAACTTCCCTCTAGACCTAGCTGCTATTGAA 2899087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744843173888000