Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq22333 567 8e-157 seq17466 372 4e-98 seq14178 194 2e-44 >seq22333 Length=1412734 Score = 567 bits (628), Expect = 8e-157 Identities = 707/969 (73%), Gaps = 0/969 (0%) Strand=Plus/Plus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | |||||| | || |||||||||| ||||| ||||||||||| Sbjct 733232 TGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCT 733291 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 | |||| | ||| | | ||||| | || ||||| || ||||| || || || Sbjct 733292 ACTTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGAT 733351 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || || || || | |||||||| | || || | | ||||| ||||| || || ||| Sbjct 733352 ATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCT 733411 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || |||||| | || || || || || |||||||| Sbjct 733412 GGTGCGATTATTCCTACTTCTGCAGCTATCGGTTTGCATTTTTACCCGATATGGGAAGCG 733471 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || || || ||||||||| | || || | | |||||| Sbjct 733472 GCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 733531 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || ||||||||| | |||||||||| | |||| | |||||| Sbjct 733532 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 733591 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 ||||||||||| ||| |||||||| ||||| || ||||||| ||||| ||||| Sbjct 733592 CGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCTGCTGTTTTCTTG 733651 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || || ||||||| ||| ||| || || || ||||||||||| ||||| ||||| Sbjct 733652 ATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACT 733711 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||||||| | |||||||| || ||||||||||| ||||||||||||||||| ||| Sbjct 733712 TTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG 733771 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || ||| || ||||| ||||| | ||| Sbjct 733772 TTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTA 733831 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || ||||| || || || || | || |||| |||| Sbjct 733832 ACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 733891 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| |||||||| || || || || || || || || || ||||| || | ||| Sbjct 733892 GGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATC 733951 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || |||||| |||| | | || |||||||| ||| | | ||| Sbjct 733952 TTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCT 734011 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | |||||||| ||| | | |||||| |||| ||||| || ||||| ||||| Sbjct 734012 GTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGT 734071 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 || || |||||||| || | || ||| | ||| ||| || ||| ||||| || Sbjct 734072 TTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGAT 734131 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 || |||| | || ||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct 734132 ATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 734191 Query 170659 CCACTTGAC 170667 || || ||| Sbjct 734192 CCTCTAGAC 734200 Score = 248 bits (274), Expect = 1e-60 Identities = 307/420 (73%), Gaps = 0/420 (0%) Strand=Plus/Plus Query 170248 GCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTAACATCTTCT 170307 |||||| | ||||| || | || ||| || ||||| ||||| | ||||| ||| | Sbjct 732403 GCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAAT 732462 Query 170308 CTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTCGGACAAGAA 170367 | ||||| || || ||||| || | || || | || |||| |||||| ||||| Sbjct 732463 TTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAG 732522 Query 170368 GAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATCTTCCAATAT 170427 |||||||| || || || || || || || || || ||||| || | |||||||||||| Sbjct 732523 GAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATAT 732582 Query 170428 GCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGC 170487 ||||| || |||||| |||| | | || |||||||| ||| | | ||||||||| | Sbjct 732583 GCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGGT 732642 Query 170488 ATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGATTTAACTTC 170547 |||||||| ||| | | |||||| |||| ||||| || ||||| ||||| || || ||| Sbjct 732643 ATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTC 732702 Query 170548 AACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAAC 170607 ||||| || | || ||| | ||| ||| || ||| ||||| || || |||| Sbjct 732703 AACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAAT 732762 Query 170608 AGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTCCCACTTGAC 170667 | || ||||| ||||||||||| |||||||| |||||||| || |||||||| || ||| Sbjct 732763 CGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGAC 732822 >seq17466 Length=9900 Score = 372 bits (412), Expect = 4e-98 Identities = 419/561 (75%), Gaps = 0/561 (0%) Strand=Plus/Plus Query 170107 GCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGT 170166 ||||| ||||| | |||||| | ||||| ||| |||||| || || |||||| |||| Sbjct 9178 GCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGA 9237 Query 170167 ATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCAC 170226 || || ||||| || ||||| ||| | |||||||| || ||||||||||| |||||||| Sbjct 9238 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCAT 9297 Query 170227 CCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCAC 170286 ||||| || ||| ||| || |||||| | ||||| || | || ||| || ||||| Sbjct 9298 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 9357 Query 170287 GGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTAT 170346 ||||| | ||||| ||| | | ||||| || || || || || ||||| || | Sbjct 9358 GGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAG 9417 Query 170347 GGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTT 170406 || |||||||| || ||||||||||| || || |||||||| || || || || || ||| Sbjct 9418 GGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTT 9477 Query 170407 GGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTT 170466 ||| || | ||||||||||||||||| || ||||| |||| | | ||||||||| | Sbjct 9478 GGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTG 9537 Query 170467 GCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTT 170526 ||| | | ||||||||| | |||||||| ||| | | |||||| | || |||||||| Sbjct 9538 GCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTC 9597 Query 170527 AACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCT 170586 ||||| |||||||| || |||||||| || | || ||| | ||| || || | Sbjct 9598 AACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAAT 9657 Query 170587 ACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAAT 170646 || ||||| || | | ||| | || || || ||||||||||||||||| || |||||| Sbjct 9658 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 9717 Query 170647 GCACACAACTTCCCACTTGAC 170667 || ||||||||||| || ||| Sbjct 9718 GCTCACAACTTCCCTCTAGAC 9738 Score = 156 bits (172), Expect = 5e-33 Identities = 239/341 (70%), Gaps = 0/341 (0%) Strand=Plus/Plus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||||| | || | || ||||||||||| ||||||||||| Sbjct 8827 TGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 8886 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | || ||||| | || |||||||| ||||| || || || Sbjct 8887 ACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGAT 8946 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | ||||| || | ||||| ||||| || || ||| Sbjct 8947 ATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCT 9006 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || ||||| | || || || || ||||||||||| Sbjct 9007 GGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCT 9066 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| || | ||||| ||||| || || || ||||||||| | || || | | |||||| Sbjct 9067 GCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 9126 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACT 170039 | | || | || || |||||| | |||||||||| Sbjct 9127 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACT 9167 >seq14178 Length=3042336 Score = 194 bits (214), Expect = 2e-44 Identities = 282/393 (72%), Gaps = 14/393 (4%) Strand=Plus/Minus Query 170278 GCAATGCACGGTTCACTTG--TAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGT 170335 || ||||| ||||| |||| |||| ||| | | ||||| || || ||| | || || | Sbjct 2899483 GCTATGCATGGTTC-CTTGGTTAACCTCTAGTTTGATCAGGGAAACCACATAAAATGAAT 2899425 Query 170336 CACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCAC 170395 | || | || |||| |||||| ||||| |||||||| || || || || || || Sbjct 2899424 CTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTT 2899365 Query 170396 ATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTC 170455 | || || ||||| || | ||||||||||||||||| | |||||| |||| | | | Sbjct 2899364 ACGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTAC 2899305 Query 170456 ACTTCTTCCTTGCTACAT-TCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGC 170514 | |||||||| ||| | | ||||||||| | |||||||| ||| | |||||||| || Sbjct 2899304 ATTTCTTCCTGGCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTAGC 2899245 Query 170515 ACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGT 170574 || || || | ||||| ||||| || || |||||||| || ||| | || | || Sbjct 2899244 ACTATAGCTTGCAACCTAAATGGTTTCAATTTCAACCAATCTATC----AAGG---TCGT 2899192 Query 170575 AAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATG 170634 ||| || ||| ||||| || || |||| | || ||||| |||| |||||| ||| Sbjct 2899191 ---GTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATG 2899135 Query 170635 CATGAGCGTAATGCACACAACTTCCCACTTGAC 170667 ||||| ||||| | || |||||||| || ||| Sbjct 2899134 CATGAACGTAAAGGTCATAACTTCCCTCTAGAC 2899102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582661488640000