Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq22333 670 0.0 seq17466 430 1e-115 seq14178 219 5e-52 >seq22333 Length=1412734 Score = 670 bits (742), Expect = 0.0 Identities = 734/973 (75%), Gaps = 2/973 (0%) Strand=Plus/Minus Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044 ||||||||||| || |||||||| ||||| |||||||||||||| |||||||||| Sbjct 734193 GGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGATTAATA 734134 Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104 | ||| ||||||||||| | ||||| ||| ||||| || | | || ||||| || Sbjct 734133 ATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGATTGGTTGAAATTG 734074 Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164 || ||||| || || || ||||| ||||||| ||| | ||||| ||||| || || || Sbjct 734073 AAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAACCAGATACCTACT 734014 Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224 || ||||||||||||| ||| || || | ||||||| ||||||||| |||||| ||| Sbjct 734013 ACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAAACTAGCATATTGG 733954 Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284 ||||| | || || || || ||||||||||| || |||||||||||||| || |||||| Sbjct 733953 AAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATAAGTTTCTTCCTCTTGA 733894 Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344 ||||| ||||||| | || || |||||||||| ||||| | ||| | | ||| Sbjct 733893 CCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAG 733834 Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCC 84404 || || | ||||||||||| ||| |||||| | || |||||||||||||| || || Sbjct 733833 GTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACGCCT 733774 Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTG 84464 |||||||| || || |||||||||||||| || || |||||||| |||| |||| ||||| Sbjct 733773 AACATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTG 733714 Query 84465 AACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATAC 84524 || || || ||||| || || ||||| |||||||| ||| ||||| |||| || || Sbjct 733713 AAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAG 733654 Query 84525 ACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGA 84584 | | ||| ||||||| || |||||||| ||||| || || |||||| ||||| ||| Sbjct 733653 ATCAAGAAAACAGCAGCCGCTGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGA 733594 Query 84585 CGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATC 84644 |||||||| ||||| | ||||||||| ||||||||||||||| | | |||||| Sbjct 733593 CGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAAGT 733534 Query 84645 AGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTT 84704 | |||||| | |||| || | |||||| || ||||| |||| |||||| || | | Sbjct 733533 AAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACCATTCATCAACGGAT 733474 Query 84705 GCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCA 84764 || |||||||| || || || ||||| | ||| ||||| ||| | |||| | ||| Sbjct 733473 GCCGCTTCCCATATCGGGTAAAAATGCAAACCGATAGCTGCAGAAGTAGGAATAATCGCA 733414 Query 84765 CCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCA 84824 |||||||| || |||||||| || | ||||| |||| || || ||||| ||||||||| Sbjct 733413 CCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCACGAATACCGTCA 733354 Query 84825 ATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAG 84883 ||||| ||||| || ||| ||| ||| || || || || ||||| ||| || | | || Sbjct 733353 ATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACAGA-AGTTGCGGTCAATAA 733295 Query 84884 AGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGAC 84943 ||| || ||||| | | ||||||||||||| || | ||||| | |||| || | Sbjct 733294 AGTAGGGATCATCAAAACACCAAACCAACCAATGTAAAGGCGGTTTTCAGTGCTAGTTAT 733235 Query 84944 CCAATCACAGAAG 84956 ||| | ||||||| Sbjct 733234 CCAGTTACAGAAG 733222 Score = 307 bits (340), Expect = 1e-78 Identities = 316/413 (77%), Gaps = 0/413 (0%) Strand=Plus/Minus Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044 ||||||||||| || |||||||| ||||| |||||||||||||| |||||||||| Sbjct 732815 GGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGATTAATA 732756 Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104 | ||| ||||||||||| | ||||| ||| ||||| || | | || ||||| || Sbjct 732755 ATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGATTGGTTGAAATTG 732696 Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164 || ||||| || || || ||||| ||||||| ||| | ||||| ||||| || || || Sbjct 732695 AAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAACCAGATACCTACT 732636 Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224 || ||||||||||||| ||| || || | ||||||| ||||||||| |||||| ||| Sbjct 732635 ACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAAACTAGCATATTGG 732576 Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284 ||||| | || || || || ||||||||||| || |||||||||||||| || |||||| Sbjct 732575 AAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATAAGTTTCTTCCTCTTGA 732516 Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344 ||||| ||||||| | || || ||||||||| ||||| | ||| | | ||| Sbjct 732515 CCGAATCTGTAACCTTCATTAGCAGATTTATTTTCTGTGGTTTCCCTGATCAAATTAGAG 732456 Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGC 84397 || || | ||||||||||| ||| |||||| | || |||||||||||||| Sbjct 732455 GTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGC 732403 >seq17466 Length=9900 Score = 430 bits (476), Expect = 1e-115 Identities = 429/556 (77%), Gaps = 0/556 (0%) Strand=Plus/Minus Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044 |||||||| || || |||||||||||||| |||||||||||||| ||||| || | Sbjct 9731 GGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTAGCACGGTTGATG 9672 Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104 | ||| ||||| ||||| | ||| || ||| ||||| || | | || ||||| || Sbjct 9671 ATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGATTGGTTGAAATTG 9612 Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164 |||||||| || || |||||||| || |||| ||| | ||||| ||||| || || || Sbjct 9611 AATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGAACCAGATCCCTACT 9552 Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224 || ||||||||||||||||| ||||| | ||||||| |||||||| |||||| ||| Sbjct 9551 ACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGG 9492 Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284 ||||| | ||||| || || ||||||||||| ||||| |||||||| || ||||||||| Sbjct 9491 AAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATAAGTCTCTTCTTCTTGA 9432 Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344 || || |||||||| | || || ||||||| || ||||| | ||| | | ||| Sbjct 9431 CCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCAAACTAGAG 9372 Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCC 84404 || || | ||||||||||| ||| |||||| | || |||||||||||||| || || Sbjct 9371 GTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACACCAGCTACACCT 9312 Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTG 84464 ||||||||||| ||||||||||||||||| || ||||||||||| |||| ||| ||||| Sbjct 9311 AACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAATACAATCATAAAGTTG 9252 Query 84465 AACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATAC 84524 || || || || || || | ||||| |||||||||||| ||||| || | |||||| Sbjct 9251 AAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGACCAATAGGATAA 9192 Query 84525 ACAAGGAATACAGCAG 84540 | | ||| ||||||| Sbjct 9191 ATCAAGAAAACAGCAG 9176 Score = 170 bits (188), Expect = 2e-37 Identities = 251/353 (71%), Gaps = 2/353 (1%) Strand=Plus/Minus Query 84605 AAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAG 84664 ||||||||| ||||||||||| ||| | | |||||| | |||||| | |||| || Sbjct 9168 AAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAG 9109 Query 84665 TTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATA 84724 | |||||| || ||||| |||| |||||| || | | ||| ||||||||||| || || Sbjct 9108 CTCATAAGGACCGCCATTGTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTA 9049 Query 84725 GAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCC 84784 ||||| | || || || ||| | |||| | ||||||||||| || |||||||| Sbjct 9048 AAAATGCAATCCGATCGCCGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCC 8989 Query 84785 GTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCACC 84844 || | | |||||||| || |||||||| ||||| |||||||| ||||| || ||| | Sbjct 8988 ATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGC 8929 Query 84845 AACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTC 84903 | ||| || || || || || || ||| || | | || || || ||||| | | | Sbjct 8928 GATGAAGGCGATAATAAATACGGA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACAC 8870 Query 84904 CAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGACCCAATCACAGAAG 84956 | ||||| || | || | |||||| | ||| || | ||| | |||||| Sbjct 8869 CGAACCATCCGATGTAAAGACGGTTTTCGGTGCTAGTTATCCAGTTGCAGAAG 8817 >seq14178 Length=3042336 Score = 219 bits (242), Expect = 5e-52 Identities = 283/387 (73%), Gaps = 14/387 (4%) Strand=Plus/Plus Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044 ||||||||||| | |||||||| ||||| |||||| |||| || |||||||||| Sbjct 2899109 GGGAAGTTATGACCTTTACGTTCATGCATAACTTCCGTACCGAGGTTAGCACGATTAATA 2899168 Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104 | ||| ||||||||||| | ||||| ||| || || || ||||| || Sbjct 2899169 ATATCAGCCCAGGTATTAATTACACGACCTTG---ATAGAT-------TGGTTGAAATTG 2899218 Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164 || ||||| || || | || || ||||||| ||||| ||||| ||||| || || || Sbjct 2899219 AAACCATTTAGGTTGCAAGCTATAGTGCTAATACCCAAAGCAGTGAACCAGATACCTACT 2899278 Query 84165 ACTGGCC-AAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTG 84223 || |||| ||||||||| ||| || || | ||||||| |||||||| |||||| || Sbjct 2899279 ACAGGCCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGACACTAGCATATTG 2899338 Query 84224 GAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTG 84283 |||||| | | || || || |||| |||||| || |||||||||||||| || ||||| Sbjct 2899339 GAAGATCAATCAGCCAAAATAACCGTAAGCAGCTACGATATTATAAGTTTCTTCCTCTTG 2899398 Query 84284 ACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGA 84343 |||||| ||||||| | || || |||||| ||| ||||| | ||| | | ||| Sbjct 2899399 ACCGAATCTGTAACCTTCATTAGCAGATTCATTTTATGTGGTTTCCCTGATCAAACTAGA 2899458 Query 84344 AGTGA--CAAGTGAACCATGCATTGCA 84368 || | |||| ||||||||||| ||| Sbjct 2899459 GGTTAACCAAG-GAACCATGCATAGCA 2899484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571090792448000