Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq22333 489 5e-134 seq17466 325 1e-84 seq14178 165 2e-36 >seq22333 Length=1412734 Score = 489 bits (542), Expect = 5e-134 Identities = 705/986 (72%), Gaps = 6/986 (1%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || ||||| ||||| || || | || ||||| || || | Sbjct 733223 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 733282 Query 25862 ATGATACCCTGCTTACTCG-CAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCAC 25919 ||||| |||| ||| | | | || ||| | ||| ||||| | |||||||| || || | Sbjct 733283 ATGAT-CCCTACTTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATTGCTGCTC 733340 Query 25920 CGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACA 25979 | || |||||||| || || || ||||| || ||||| || || || | || ||||||| Sbjct 733341 CTCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 733400 Query 25980 ATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGA 26039 |||| || || || || | | || | ||| || ||||| | ||||||||||||| Sbjct 733401 ATATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATCGGTTTGCATTTTTACCCGA 733460 Query 26040 TCTGGGAAGCTGGCACAC-TGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATT 26098 | |||||||| |||| | | || || ||| ||||||||||||| || ||| | || ||| Sbjct 733461 TATGGGAAGC-GGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATT 733519 Query 26099 ATCTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTAC 26158 | | ||||||||| | || ||||| || || | |||||||||| || | Sbjct 733520 GTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTC 733579 Query 26159 AGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTC 26218 | || || ||| | || ||||| |||||||||| |||| || | | ||||| Sbjct 733580 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCT 733639 Query 26219 GCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGT 26278 || || ||||| | || || |||| ||||| |||||| |||||| |||||||| || Sbjct 733640 GCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGA 733699 Query 26279 ATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCAC 26338 |||||||||||||| ||||| ||| | |||||||| || || || || || || |||||| Sbjct 733700 ATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCAC 733759 Query 26339 CCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCAC 26398 |||||||| ||| || || ||||| || ||||| || | || ||| ||||||||| Sbjct 733760 CCATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 733819 Query 26399 GGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTAT 26458 || ||||| || || | || ||||| ||||| | | || ||| | Sbjct 733820 GGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 733879 Query 26459 GGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTT 26518 || || | || || ||||| ||||| || |||||||| || ||||| ||||| || ||| Sbjct 733880 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTT 733939 Query 26519 GGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTT 26578 || |||| || || || ||||| ||||| || || |||||| | |||||||| || Sbjct 733940 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTG 733999 Query 26579 GCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTT 26638 ||| ||||||| || || || || ||| | || || | ||||| |||| ||||| || Sbjct 734000 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTC 734059 Query 26639 AACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCT 26698 |||||||||||||| || || ||||| || ||||| ||| | | || |||| | Sbjct 734060 AACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 734119 Query 26699 ACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAAT 26758 || ||||||||| | | || || |||||||| || | ||||||||||| || |||||| Sbjct 734120 ACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 734179 Query 26759 GCTCATAACTTTCCACTTGACTTAGC 26784 ||||||||||| || || ||| |||| Sbjct 734180 GCTCATAACTTCCCTCTAGACCTAGC 734205 Score = 221 bits (244), Expect = 4e-53 Identities = 310/431 (72%), Gaps = 3/431 (1%) Strand=Plus/Plus Query 26356 TGTT-GCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTT 26414 |||| ||||| || ||||| || | || ||| ||||||||| || ||||| || | Sbjct 732398 TGTTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCT 732457 Query 26415 CCTCACTT-ATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTTTGGG 26473 | | | || || ||||| ||||| | || ||| | || || | || || Sbjct 732458 C-TAATTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGT 732516 Query 26474 CAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTT 26533 ||||| ||||| || |||||||| || ||||| ||||| || ||||| |||| || || Sbjct 732517 CAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTC 732576 Query 26534 CAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTT 26593 || ||||| ||||| || || |||||| | |||||||| || ||| ||||||| || Sbjct 732577 CAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTA 732636 Query 26594 GTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTT 26653 || || || ||| | || || | ||||| |||| ||||| || |||||||||||||| Sbjct 732637 GTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTC 732696 Query 26654 AACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCTGATGTA 26713 || || ||||| || ||||| ||| | | || |||| ||| ||||||||| | Sbjct 732697 AATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATT 732756 Query 26714 TTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACTTTCCA 26773 | || || |||||||| || | ||||||||||| || ||||||||||||||||| || Sbjct 732757 ATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCT 732816 Query 26774 CTTGACTTAGC 26784 || ||| |||| Sbjct 732817 CTAGACCTAGC 732827 >seq17466 Length=9900 Score = 325 bits (360), Expect = 1e-84 Identities = 414/567 (73%), Gaps = 2/567 (0%) Strand=Plus/Plus Query 26219 GCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGT 26278 || || ||||| |||||||| | || ||||| ||||| |||||| |||||| | || Sbjct 9178 GCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGA 9237 Query 26279 ATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCAC 26338 || ||||||||||| ||||||||| | |||||||| || || || || || || ||||| Sbjct 9238 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCAT 9297 Query 26339 CCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCAC 26398 ||||| || ||| ||||| ||||| || ||||| || | || ||| ||||||||| Sbjct 9298 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 9357 Query 26399 GGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTAT 26458 || ||||| || || | || ||||| || || | | || ||| | Sbjct 9358 GGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAG 9417 Query 26459 GGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTT 26518 || || || ||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||| Sbjct 9418 GGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTT 9477 Query 26519 GGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTT 26578 || ||||||| || || ||||| ||||| || ||| |||||| | || ||||| | Sbjct 9478 GGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTG 9537 Query 26579 GCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTT 26638 ||| ||||||| || || || || ||| | || || | ||||| | || |||||||| Sbjct 9538 GCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTC 9597 Query 26639 AACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAATACC 26697 ||||||||||| || || || ||||| || ||||| ||| || || | | || || Sbjct 9598 AACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTA-A 9656 Query 26698 TACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAA 26757 ||| ||||||||| | | ||||| ||||| || || | ||||| |||||||| ||||| Sbjct 9657 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 9716 Query 26758 TGCTCATAACTTTCCACTTGACTTAGC 26784 |||||| ||||| || || ||| |||| Sbjct 9717 TGCTCACAACTTCCCTCTAGACCTAGC 9743 Score = 179 bits (198), Expect = 1e-40 Identities = 228/314 (73%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 25811 TGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCC 25870 ||| | || || || || |||||||| || | ||||||||||| || | ||||| || Sbjct 8827 TGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 8886 Query 25871 TGCTTACTCGCAGCCACTACATGTTTTATACTTGCCTTCATCGCAGCACCGCCTGTAGAT 25930 |||| | | || ||| | ||||| | ||||||||||| || || || |||||| Sbjct 8887 ACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGAT 8946 Query 25931 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATCA 25990 || ||||| || |||||||| ||||| || || ||| | || ||||||||||| || || Sbjct 8947 ATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCT 9006 Query 25991 GGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGCT 26050 || || | | || | ||| || |||||| | ||||||||||| || ||||||||| Sbjct 9007 GGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCT 9066 Query 26051 GGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTTC 26110 | | | || || ||| ||||||||||||| || ||| | || ||| | | |||||| Sbjct 9067 GCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 9126 Query 26111 TTAATAGGAGTAGC 26124 ||| | || ||||| Sbjct 9127 TTACTTGGTGTAGC 9140 >seq14178 Length=3042336 Score = 165 bits (182), Expect = 2e-36 Identities = 230/318 (72%), Gaps = 11/318 (3%) Strand=Plus/Minus Query 26468 TTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTA 26527 || || ||||| ||||| || |||||||| || ||||| |||| || ||||| |||| Sbjct 2899404 TTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTACGGTTATTTTGGCTGATTG 2899345 Query 26528 ATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGG 26587 || || || ||||| ||| | || || |||||| | |||||||| || ||| ||||| Sbjct 2899344 ATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGG 2899285 Query 26588 -CCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAA 26646 || || || || || ||| | || || ||||||| |||| || || | |||||||| Sbjct 2899284 GCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTAGCACTATAGCTTGCAACCTAAA 2899225 Query 26647 TGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGC 26706 |||||| || || ||||| || || | | | || || ||||||| ||||| Sbjct 2899224 TGGTTTCAATTTCAACCAATC--TA--TCAAGGTCGTGTAA--TTAATACC----TGGGC 2899175 Query 26707 TGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAA 26766 |||| | | || || ||||||||||| ||||||||||| || ||||| | |||||| Sbjct 2899174 TGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATGCATGAACGTAAAGGTCATAA 2899115 Query 26767 CTTTCCACTTGACTTAGC 26784 ||| || || ||| |||| Sbjct 2899114 CTTCCCTCTAGACCTAGC 2899097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146681795174400