Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq22333 547 2e-151 seq17466 329 1e-85 seq14178 154 4e-33 >seq22333 Length=1412734 Score = 547 bits (606), Expect = 2e-151 Identities = 718/990 (73%), Gaps = 6/990 (1%) Strand=Plus/Minus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| |||||||| || |||||||| || || ||||| ||||||||||||||||| || | Sbjct 734209 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 734150 Query 36029 GTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGAC 36088 || ||||| |||| ||| |||||||| || | || | || | |||||| || Sbjct 734149 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTAC 734090 Query 36089 TGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGT 36148 || || ||||| || || || || || || |||||||||||| | || | ||| || Sbjct 734089 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGT 734030 Query 36149 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATT 36208 | ||| || | || ||||||||||||||||||||||||||| || ||| || Sbjct 734029 GAACCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTT 733970 Query 36209 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 36268 || |||||||| |||||||| | || ||||| || || ||||| || || || ||||| Sbjct 733969 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATA 733910 Query 36269 CGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTC 36328 || ||||| ||||| |||||| | || || | || ||||||| | || ||||| Sbjct 733909 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 733850 Query 36329 ACGAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACC 36385 | || || | |||| || |||| || ||||||||| ||||| | || || Sbjct 733849 CCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAGCCGCC 733793 Query 36386 GAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTG 36445 |||||| || || || || | ||| ||||| || ||||||||||| ||||| || ||||| Sbjct 733792 GAATACACCAGCTACGCCTAACATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTG 733733 Query 36446 AAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACT 36505 || |||| ||| || |||||||| || || || || ||||||||||||||||| ||||| Sbjct 733732 GAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACT 733673 Query 36506 CCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATA 36565 ||||| || | ||||||| ||||| |||||| |||||||||||||| |||||||| Sbjct 733672 TCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGCCGCTGCTGCAACAGGAGCTGAATA 733613 Query 36566 AGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAA 36625 || ||| ||||| || | |||||| || | ||||||||||||| | || |||| Sbjct 733612 TGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCAT 733553 Query 36626 GTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATA 36685 |||| | | ||||| | ||||| | ||||| || | ||| || || || || || Sbjct 733552 GTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTA 733493 Query 36686 TAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTT 36745 |||||| || || | || ||| |||||||| || ||||| || || | |||||| || Sbjct 733492 TAACCATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAATGCAAACCGATAGCTGC 733433 Query 36746 CGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGAC 36805 || | || | || || ||||| || || ||||||||||| |||| | ||| || || Sbjct 733432 AGAAGTAGGAATAATCGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAAC 733373 Query 36806 AGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGC 36865 ||| ||||||||||| || ||||| || ||||| ||||||| || || || | |||| | Sbjct 733372 AGGTTCACGAATACCGTCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATAC 733313 Query 36866 TGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCG 36925 | ||| || || | | ||||||||| | || |||||||| || | || ||||| Sbjct 733312 AGAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCAACCAATGTAAAGGCG 733253 Query 36926 GTTGTTTGTACTTGTAACCCAGTCACATAA 36955 ||| | || || || | ||||| ||| || Sbjct 733252 GTTTTCAGTGCTAGTTATCCAGTTACAGAA 733223 Score = 206 bits (228), Expect = 8e-49 Identities = 309/435 (71%), Gaps = 3/435 (1%) Strand=Plus/Minus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| |||||||| || |||||||| || || ||||| ||||||||||||||||| || | Sbjct 732831 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 732772 Query 36029 GTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGAC 36088 || ||||| |||| ||| |||||||| || | || | || | |||||| || Sbjct 732771 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTAC 732712 Query 36089 TGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGT 36148 || || ||||| || || || || || || |||||||||||| | || | ||| || Sbjct 732711 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGT 732652 Query 36149 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATT 36208 | ||| || | || ||||||||||||||||||||||||||| || ||| || Sbjct 732651 GAACCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTT 732592 Query 36209 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 36268 || |||||||| |||||||| | || ||||| || || ||||| || || || ||||| Sbjct 732591 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATA 732532 Query 36269 CGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTC 36328 || ||||| ||||| |||||| | || || | || ||||| | | || ||||| Sbjct 732531 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTTATTTTCTGTGGTTTC 732472 Query 36329 AC-GAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGA 36387 | || || | | || || || | || ||||||||| ||||| | || |||| Sbjct 732471 CCTGATCAAATTA-GAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGA 732413 Query 36388 ATACCCCTGC-AACA 36401 |||| || || |||| Sbjct 732412 ATACACCAGCTAACA 732398 >seq17466 Length=9900 Score = 329 bits (364), Expect = 1e-85 Identities = 420/574 (73%), Gaps = 6/574 (1%) Strand=Plus/Minus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| |||||||| || ||||||||||| || ||||| || ||||| |||||||| || | Sbjct 9747 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 9688 Query 36029 GTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGAC 36088 | |||||||| | || ||||||||||| | || | || | |||||| || Sbjct 9687 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 9628 Query 36089 TGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGT 36148 || || ||||| || || || || || || || |||||||| | || | ||| || Sbjct 9627 AGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 9568 Query 36149 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATT 36208 | ||| || | || ||||||||||||| |||||| |||||| || || || Sbjct 9567 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 9508 Query 36209 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 36268 || |||||||| |||||||| | || ||||| || || ||||| || ||||||||||| Sbjct 9507 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATA 9448 Query 36269 CGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTC 36328 |||||||||||||| || ||||| || || | || ||| ||| |||| ||||| Sbjct 9447 AGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTC 9388 Query 36329 ACGAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACC 36385 | || || | |||| || |||| || ||||||||| ||||| | || || Sbjct 9387 CCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCC 9331 Query 36386 GAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTG 36445 |||||| || || ||||| | ||| || || |||||||||||||| ||||| || ||||| Sbjct 9330 GAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTG 9271 Query 36446 AAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACT 36505 || |||| |||||| |||||||| || || || || | ||||||||||||||||||||| Sbjct 9270 GAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACT 9211 Query 36506 CCCTTGTCCAAAAGGGTAGACTAAGAATACAGCA 36539 ||||| |||| ||| || | ||||| |||||| Sbjct 9210 TCCTTGACCAATAGGATAAATCAAGAAAACAGCA 9177 Score = 163 bits (180), Expect = 9e-36 Identities = 243/345 (70%), Gaps = 0/345 (0%) Strand=Plus/Minus Query 36604 TAAGTTCCCATTGTCGTCCCAAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGA 36663 |||||||||| | || |||| ||| | | ||||| | ||||| | ||||| | Sbjct 9169 TAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTA 9110 Query 36664 GTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGT 36723 | | ||| || || || || |||||||| || || | | |||||||||||| ||||||| Sbjct 9109 GCTCATAAGGACCGCCATTGTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGT 9050 Query 36724 AGAAGTGAAGACCGATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTC 36783 | || || | ||||| || || | || | || || ||||| || || ||||||| Sbjct 9049 AAAAATGCAATCCGATCGCCGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTC 8990 Query 36784 CATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAG 36843 |||| ||||| | || || |||||||||||||||||||| ||||| || ||||| |||| Sbjct 8989 CATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAG 8930 Query 36844 CAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCC 36903 | | || || || | |||| | | ||| || || | | ||||||||| | || | Sbjct 8929 CGATGAAGGCGATAATAAATACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACAC 8870 Query 36904 CAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAGT 36948 | ||||| || | || || ||||| | || || || | ||||| Sbjct 8869 CGAACCATCCGATGTAAAGACGGTTTTCGGTGCTAGTTATCCAGT 8825 >seq14178 Length=3042336 Score = 154 bits (170), Expect = 4e-33 Identities = 242/347 (70%), Gaps = 11/347 (3%) Strand=Plus/Plus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| |||||||| || |||||||| || | ||||| ||||||||||||||| | || | Sbjct 2899093 AGCAGCTAGGTCTAGAGGGAAGTTATGACCTTTACGTTCATGCATAACTTCCGTACCGAG 2899152 Query 36029 GTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGAC 36088 || ||||| |||| ||| |||||||| || | || | || | || Sbjct 2899153 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTT----------GAT 2899202 Query 36089 TGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGT 36148 || || ||||| || || || || || || |||| |||||| | |||| ||| || Sbjct 2899203 AGATTGGTTGAAATTGAAACCATTTAGGTTGCAAGCTATAGTGCTAATACCCAAAGCAGT 2899262 Query 36149 AAGCCATATGCAAGTGACGGGCC-AAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTAT 36207 | ||| || | || |||| ||||||||||||||||||||||| || ||| | Sbjct 2899263 GAACCAGATACCTACTACAGGCCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGT 2899322 Query 36208 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 36267 | | |||||||| |||||||| | || ||||| || || | ||| || || || |||| Sbjct 2899323 TGACACTAGCATATTGGAAGATCAATCAGCCAAAATAACCGTAAGCAGCTACGATATTAT 2899382 Query 36268 ACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCA 36314 | || ||||| ||||| |||||| | || || | || ||||||| Sbjct 2899383 AAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCA 2899429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150408661862400