Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_016659.1
Length=47536
Score E
Sequences producing significant alignments: (Bits) Value
seq22333 531 2e-146
seq17466 381 2e-101
seq14178 156 1e-33
>seq22333
Length=1412734
Score = 531 bits (588), Expect = 2e-146
Identities = 712/986 (72%), Gaps = 6/986 (1%)
Strand=Plus/Minus
Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512
|||| ||| ||||||||||| || || ||||| ||||||||||||||||| || | ||
Sbjct 734205 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 734146
Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572
||||| |||| ||| |||||||| || | || | || | |||||| || ||
Sbjct 734145 GCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 734086
Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632
|| ||||| || || || || || || |||||||||||| | || | ||| || | |
Sbjct 734085 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAAC 734026
Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692
|| || | || ||||||||||||||||||||||||||| ||| ||| || ||
Sbjct 734025 CAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAAA 733966
Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752
|||||||| |||||||| | || ||||| || || ||||| || || || ||||| ||
Sbjct 733965 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATAAGTT 733906
Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812
||||| ||||| |||||| | || || | || ||||||| | || ||||| |
Sbjct 733905 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 733846
Query 25813 AT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAAT 25869
|| || | |||| || |||| || ||||||||| ||||| | || ||||||
Sbjct 733845 ATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAGCCGCCGAAT 733789
Query 25870 ACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAG 25929
|| || || || || | ||| ||||| || ||||||||||| ||||| || ||||| ||
Sbjct 733788 ACACCAGCTACGCCTAACATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAAT 733729
Query 25930 ACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCT 25989
|||| ||| || |||||||| || || || || ||||||||||||||||| ||||| |||
Sbjct 733728 ACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCT 733669
Query 25990 TGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCT 26049
|| || | ||||||| ||||| |||||| |||||||||||||| |||||||| ||
Sbjct 733668 TGACCGATTGGGTAGATCAAGAAAACAGCAGCCGCTGCTGCAACAGGAGCTGAATATGCA 733609
Query 26050 ACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAA 26109
||| ||||| || | ||| || || | ||||||||||||| | || |||| ||||
Sbjct 733608 ACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAA 733549
Query 26110 GCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAAC 26169
| | || | | ||||| | ||||| || | ||| || || || || || |||
Sbjct 733548 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAAC 733489
Query 26170 CACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGAT 26229
|| || || | || ||| |||||||| || ||||| || || | |||||| || |||
Sbjct 733488 CATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAATGCAAACCGATAGCTGCAGAA 733429
Query 26230 GACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGC 26289
| || | || || || || || || ||||||||||| |||| | ||| || |||||
Sbjct 733428 GTAGGAATAATCGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGT 733369
Query 26290 TCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTC 26349
||||||||||| || ||||| || ||||| ||||||| || || || | |||| | |
Sbjct 733368 TCACGAATACCGTCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACAGAA 733309
Query 26350 ACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTG 26409
||| || || | | ||||||||| | || |||||||| || | || ||||||||
Sbjct 733308 GTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCAACCAATGTAAAGGCGGTTT 733249
Query 26410 TTTGTACTTGTAACCCAGTCACATAA 26435
| || || || | ||||| ||| ||
Sbjct 733248 TCAGTGCTAGTTATCCAGTTACAGAA 733223
Score = 208 bits (230), Expect = 2e-49
Identities = 307/431 (71%), Gaps = 3/431 (1%)
Strand=Plus/Minus
Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512
|||| ||| ||||||||||| || || ||||| ||||||||||||||||| || | ||
Sbjct 732827 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 732768
Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572
||||| |||| ||| |||||||| || | || | || | |||||| || ||
Sbjct 732767 GCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 732708
Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632
|| ||||| || || || || || || |||||||||||| | || | ||| || | |
Sbjct 732707 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAAC 732648
Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692
|| || | || ||||||||||||||||||||||||||| ||| ||| || ||
Sbjct 732647 CAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAAA 732588
Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752
|||||||| |||||||| | || ||||| || || ||||| || || || ||||| ||
Sbjct 732587 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATAAGTT 732528
Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCAC-G 25811
||||| ||||| |||||| | || || | || ||||| | | || ||||| | |
Sbjct 732527 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTTATTTTCTGTGGTTTCCCTG 732468
Query 25812 AATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATAC 25871
| || | | || || || | || ||||||||| ||||| | || ||||||||
Sbjct 732467 ATCAAATTA-GAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATAC 732409
Query 25872 CCCTGC-AACA 25881
|| || ||||
Sbjct 732408 ACCAGCTAACA 732398
>seq17466
Length=9900
Score = 381 bits (422), Expect = 2e-101
Identities = 671/979 (69%), Gaps = 63/979 (6%)
Strand=Plus/Minus
Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512
|||| ||| |||||||||||||| || ||||| || ||||| |||||||| || | |
Sbjct 9743 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 9684
Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572
|||||||| | || ||||||||||| | || | || | |||||| || ||
Sbjct 9683 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 9624
Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632
|| ||||| || || || || || || || |||||||| | || | ||| || | |
Sbjct 9623 TGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGAAC 9564
Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692
|| || | || ||||||||||||| |||||| |||||| ||| || || ||
Sbjct 9563 CAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 9504
Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752
|||||||| |||||||| | || ||||| || || ||||| || ||||||||||| |||
Sbjct 9503 CTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATAAGTC 9444
Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812
||||||||||| || ||||| || || | || ||| ||| |||| ||||| |
Sbjct 9443 TCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCCTG 9384
Query 25813 AT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAAT 25869
|| || | |||| || |||| || ||||||||| ||||| | || ||||||
Sbjct 9383 ATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCCGAAT 9327
Query 25870 ACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAG 25929
|| || || ||||| | ||| || || |||||||||||||| ||||| || ||||| ||
Sbjct 9326 ACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAAT 9267
Query 25930 ACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCT 25989
|||| |||||| |||||||| || || || || | ||||||||||||||||||||| |||
Sbjct 9266 ACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCT 9207
Query 25990 TGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCT 26049
|| |||| ||| || | ||||| ||||| || || | |||| |
Sbjct 9206 TGACCAATAGGATAAATCAAGAAAACAGC---------------AGTAGC--ANTAAGTT 9164
Query 26050 ACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAA 26109
| | |||| || ||| ||||| ||| | | ||||||||
Sbjct 9163 CCCACT---CACGACC-CAT---------ATAAC-AAGCTACA---------CCAAGTAA 9127
Query 26110 GCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAAC 26169
| ||||| | ||||| || | ||| || || || || || |||
Sbjct 9126 G-----------------AAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAAC 9084
Query 26170 CACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGAT 26229
|| || || | | |||||||||||| |||||||| || || | ||||| || |||
Sbjct 9083 CATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAA 9024
Query 26230 GACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGC 26289
| || | || || || || || || ||||||||||| ||||| | || || ||||||
Sbjct 9023 GTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGC 8964
Query 26290 TCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTC 26349
|||||||||||||| ||||| || ||||| ||||| | || || || | |||| | |
Sbjct 8963 TCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAA 8904
Query 26350 ACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTG 26409
||| || || | | ||||||||| | || || ||||| || | || || |||||
Sbjct 8903 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGTTT 8844
Query 26410 TTTGTACTTGTAACCCAGT 26428
| || || || | |||||
Sbjct 8843 TCGGTGCTAGTTATCCAGT 8825
>seq14178
Length=3042336
Score = 156 bits (172), Expect = 1e-33
Identities = 240/343 (70%), Gaps = 11/343 (3%)
Strand=Plus/Plus
Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512
|||| ||| ||||||||||| || | ||||| ||||||||||||||| | || | ||
Sbjct 2899097 GCTAGGTCTAGAGGGAAGTTATGACCTTTACGTTCATGCATAACTTCCGTACCGAGGTTA 2899156
Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572
||||| |||| ||| |||||||| || | || | || | || ||
Sbjct 2899157 GCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTT----------GATAGAT 2899206
Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632
|| ||||| || || || || || || |||| |||||| | |||| ||| || | |
Sbjct 2899207 TGGTTGAAATTGAAACCATTTAGGTTGCAAGCTATAGTGCTAATACCCAAAGCAGTGAAC 2899266
Query 25633 CATATGCAAGTGACGGGCC-AAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAA 25691
|| || | || |||| ||||||||||||||||||||||| ||| ||| || |
Sbjct 2899267 CAGATACCTACTACAGGCCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAC 2899326
Query 25692 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGT 25751
|||||||| |||||||| | || ||||| || || | ||| || || || ||||| ||
Sbjct 2899327 ACTAGCATATTGGAAGATCAATCAGCCAAAATAACCGTAAGCAGCTACGATATTATAAGT 2899386
Query 25752 CTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCA 25794
||||| ||||| |||||| | || || | || |||||||
Sbjct 2899387 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCA 2899429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151947393945600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |