Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq20901 120 6e-22
>seq20901
Length=225483
Score = 120 bits (132), Expect = 6e-22
Identities = 430/662 (65%), Gaps = 24/662 (4%)
Strand=Plus/Plus
Query 48041 AACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGT 48100
|||||| ||||||||| ||| || ||| ||| ||| ||| ||||| ||| |
Sbjct 70527 AACTCCCTCTCTATCTCCACCGCCTCCTTCACTATCCCCTTCACGCGCTCCTCGCTTAAT 70586
Query 48101 TTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCC 48160
||||| | ||| || || | || ||| || || || | ||| | ||||||||
Sbjct 70587 TTGTTCCTCAGCAAGCTG---TACAACAAGCACGCGAAATCGCAGTGGAGTCCTTCGTCT 70643
Query 48161 CGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAG 48220
|| ||| ||| |||| |||||| || || ||||| | ||| | || ||| | |||
Sbjct 70644 CGCGAGATTAGCTCGTTTGAGAAGGTTAGCCCCGGCATTAACCCGCGCTTTTTTAACCAA 70703
Query 48221 AAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGC 48280
|| || || |||| ||| ||||| || || || ||||| || ||||| | ||
Sbjct 70704 AATATCGCGCAGAAACTGCCCGAGAAAAATATCCCTTCCACGCAAGCAAACGCTATCAGT 70763
Query 48281 CTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTC 48340
||||| |||| | | ||| |||||| || ||||| || ||||| ||
Sbjct 70764 CTCTCCGCGAATGTCTCCGAGCCGTC---GATCCAATTTAGGGCCCAATCGGCCTT--TC 70818
Query 48341 TTG--ATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTCACCTGCGT 48395
| | | ||| |||| ||| || | ||| || || | | |||| || | | ||
Sbjct 70819 TGGCAACGCACGGCACCGTTTCAAAGGCGCGAAATAAGCGGCTCTTT---TCGTCGGAGT 70875
Query 48396 CCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455
| | || || || || | |||||| || ||||| | ||||| || ||||
Sbjct 70876 TCTTTATGTACGTTTCTAGAAGGAGCGAGTACATTTCGGAGTGGATGTTCTCGATGGCGA 70935
Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515
| ||||| ||||||||||| | ||||| | || || |||||| | ||| || ||
Sbjct 70936 TTTGGAAGCCGTAGAAGGCACGCGCCTCGGAGACTTGGACTTCTTTCATGAACCT-GGCA 70994
Query 48516 GC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574
|| || || || ||| || ||||| || || || |||||||| || || || | | |
Sbjct 70995 GCGAGGTTTTCGAGGACGATTCCATCCGAGGCGGCGAAGAAGGCGAGCACGTGAGTGATG 71054
Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCT---GTACGTCTTTGCCCAGGTCC 48631
|| || ||||| | ||| || | ||||| | || | | ||| | ||||||
Sbjct 71055 AAGTGTTTCTCGTCGGCGGTTAG-GGATTCC--CACTGGCGGATGTCCTGCGACAGGTCG 71111
Query 48632 ACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATGTCCGGA 48691
|| || ||| | ||||| || || || ||||| |||||||| |||| || |||||
Sbjct 71112 ACCTCCTCCGCCGTCCAAAATGAAGCTTCGGCTTTCTTGTACATTTCCCAGATTTCCGGG 71171
Query 48692 TA 48693
||
Sbjct 71172 TA 71173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931234709504000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |