Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq20901 120 6e-22 >seq20901 Length=225483 Score = 120 bits (132), Expect = 6e-22 Identities = 430/662 (65%), Gaps = 24/662 (4%) Strand=Plus/Plus Query 48041 AACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGT 48100 |||||| ||||||||| ||| || ||| ||| ||| ||| ||||| ||| | Sbjct 70527 AACTCCCTCTCTATCTCCACCGCCTCCTTCACTATCCCCTTCACGCGCTCCTCGCTTAAT 70586 Query 48101 TTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCC 48160 ||||| | ||| || || | || ||| || || || | ||| | |||||||| Sbjct 70587 TTGTTCCTCAGCAAGCTG---TACAACAAGCACGCGAAATCGCAGTGGAGTCCTTCGTCT 70643 Query 48161 CGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAG 48220 || ||| ||| |||| |||||| || || ||||| | ||| | || ||| | ||| Sbjct 70644 CGCGAGATTAGCTCGTTTGAGAAGGTTAGCCCCGGCATTAACCCGCGCTTTTTTAACCAA 70703 Query 48221 AAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGC 48280 || || || |||| ||| ||||| || || || ||||| || ||||| | || Sbjct 70704 AATATCGCGCAGAAACTGCCCGAGAAAAATATCCCTTCCACGCAAGCAAACGCTATCAGT 70763 Query 48281 CTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTC 48340 ||||| |||| | | ||| |||||| || ||||| || ||||| || Sbjct 70764 CTCTCCGCGAATGTCTCCGAGCCGTC---GATCCAATTTAGGGCCCAATCGGCCTT--TC 70818 Query 48341 TTG--ATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTCACCTGCGT 48395 | | | ||| |||| ||| || | ||| || || | | |||| || | | || Sbjct 70819 TGGCAACGCACGGCACCGTTTCAAAGGCGCGAAATAAGCGGCTCTTT---TCGTCGGAGT 70875 Query 48396 CCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455 | | || || || || | |||||| || ||||| | ||||| || |||| Sbjct 70876 TCTTTATGTACGTTTCTAGAAGGAGCGAGTACATTTCGGAGTGGATGTTCTCGATGGCGA 70935 Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515 | ||||| ||||||||||| | ||||| | || || |||||| | ||| || || Sbjct 70936 TTTGGAAGCCGTAGAAGGCACGCGCCTCGGAGACTTGGACTTCTTTCATGAACCT-GGCA 70994 Query 48516 GC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574 || || || || ||| || ||||| || || || |||||||| || || || | | | Sbjct 70995 GCGAGGTTTTCGAGGACGATTCCATCCGAGGCGGCGAAGAAGGCGAGCACGTGAGTGATG 71054 Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCT---GTACGTCTTTGCCCAGGTCC 48631 || || ||||| | ||| || | ||||| | || | | ||| | |||||| Sbjct 71055 AAGTGTTTCTCGTCGGCGGTTAG-GGATTCC--CACTGGCGGATGTCCTGCGACAGGTCG 71111 Query 48632 ACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATGTCCGGA 48691 || || ||| | ||||| || || || ||||| |||||||| |||| || ||||| Sbjct 71112 ACCTCCTCCGCCGTCCAAAATGAAGCTTCGGCTTTCTTGTACATTTCCCAGATTTCCGGG 71171 Query 48692 TA 48693 || Sbjct 71172 TA 71173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931234709504000