Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq18882 129 1e-24 >seq18882 Length=869960 Score = 129 bits (142), Expect = 1e-24 Identities = 374/564 (66%), Gaps = 15/564 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| ||||||||||| || || || |||||||| || || ||||||| Sbjct 814773 ATTTGGGAAATGTACAAGAAAGCCGAAGCGTCGTTTTGGACCGCTGAGGAAGTTGATCTT 814714 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | | || | | |||| | || ||| || |||||| |||| || ||| | || Sbjct 814713 TCGCAAGATCTCCGCCACTGGGAGGCCCTAACCGCTGACGAGAAGCACTTCGTCACGCAC 814654 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 ||| | || ||||| || ||||| || || || || |||||| || || || ||| Sbjct 814653 GTGCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCAGGTTC 814594 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT-TTCTACGGTTTCCAGATGGCCATCGA 25715 | | ||| || ||| || ||||| ||| |||||||| ||||| || ||||| || Sbjct 814593 ATGACGGAGGTCCAGGTCGCCGAGGCGC-GTGCCTTCTACGGCTTCCAAATCGCCATTGA 814535 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGA 25775 || | ||||| || |||| | |||||| || ||||| | | || || ||| Sbjct 814534 GAACATCCACTCCGAAATGTACTCGCTGCTTCTAGAAACTTACATCAAAAACTCCGACGA 814475 Query 25776 GAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTG 25835 | |||| || ||| |||||||| | ||| || || | ||| || ||| Sbjct 814474 AAAGAATCGTCTCTTTCACGCCATCGAAACGGTTCCCTGCGTCGCAAAGAAAGCCACGTG 814415 Query 25836 GGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894 ||| | || |||||| || || | ||| || || | |||| | | | || |||| Sbjct 814414 GGCGTTAAATTGGATCGACGGCTCGGAG----ACTTTCGCCGAGAGATTAATCGCGTTTG 814359 Query 25895 CTGCTGTGGAGGGCATCTTTTTC--AGCG-GTTCGTTTGCGGCCATCTTCTGGCTCAAGC 25951 || |||||||| || || ||| || | ||| |||||| | || || |||||||| Sbjct 814358 CTTGCGTGGAGGGGATTTTCTTCTCAGGGAGTT--TTTGCG-CGATATTTTGGCTCAAAA 814302 Query 25952 AGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || ||| ||||| ||| | || || || |||||| | ||| | || |||||| Sbjct 814301 AGCGAGGGTTAATGCC-GGGATTAACATTCTCAAACGAGTTGATCTCGCGAGATGAGGGT 814243 Query 26011 CTCCACAGAGATTTTGCCTGCCTG 26034 |||||| | |||||||| |||||| Sbjct 814242 CTCCACTGCGATTTTGCGTGCCTG 814219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928547569664000