Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq22333 531 2e-146 seq17466 347 4e-91 seq14178 150 5e-32 >seq22333 Length=1412734 Score = 531 bits (588), Expect = 2e-146 Identities = 720/993 (73%), Gaps = 18/993 (2%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| ||||| |||||||||||||||||||| || ||||||||||| | |||||||| Sbjct 734206 AGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 734147 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCT---CCAGCTGCTACAAT 17950 ||| | || | | |||||||| ||| | || | ||| | | | ||||| Sbjct 734146 AGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACA-- 734089 Query 17951 GGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 18010 ||||||||||| ||||| ||||| || || |||||||||||| || || | || || Sbjct 734088 -GATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGT 734030 Query 18011 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTT 18070 | ||| || | || ||||||||||||| ||||||||||| | | |||||| Sbjct 734029 GAACCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTT 733970 Query 18071 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATA 18130 || |||||||| |||||||| | || ||||| || || ||||| || || |||||||| Sbjct 733969 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATA 733910 Query 18131 CGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTC 18190 || ||||| ||||| || ||| | || || | || ||| ||| || || ||||| Sbjct 733909 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 733850 Query 18191 TCTAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACC 18247 || || || | |||| || |||| || ||||||||| ||||| | || || Sbjct 733849 CCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAGCCGCC 733793 Query 18248 GAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTG 18307 |||||| || || || || | ||| ||||| || ||||||||||| ||||| || || || Sbjct 733792 GAATACACCAGCTACGCCTAACATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTG 733733 Query 18308 GAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACT 18367 |||||| | |||||| ||||||||||| || || ||||||||||||||||| ||||| Sbjct 733732 GAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACT 733673 Query 18368 CCCTTGTCCAAAAGGATAAA-CGAGAAATACTGAGAAG--GCAGCTGCTACTGGTGCGGA 18424 ||||| || | || || | | ||||| || || || || ||||| || || || || Sbjct 733672 TCCTTGACCGATTGGGTAGATCAAGAAA-AC--AGCAGCCGCTGCTGCAACAGGAGCTGA 733616 Query 18425 ATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCC 18484 ||| |||||| |||||| || |||||||| || | ||||||||||||| | || || Sbjct 733615 ATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 733556 Query 18485 CATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTT 18544 ||||||| || | || | | ||||| | ||||| || | ||| || || || || Sbjct 733555 CATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATT 733496 Query 18545 ATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGC 18604 |||||||| || || | || ||| |||||||| || ||||| || || | |||||| || Sbjct 733495 GTATAACCATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAATGCAAACCGATAGC 733436 Query 18605 GTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGA 18664 ||| | || | || || || || || || ||||||||||| |||| | ||| || Sbjct 733435 TGCAGAAGTAGGAATAATCGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGA 733376 Query 18665 GACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAA 18724 ||||| ||||||||||| || || || || ||||||||||||| || || || | ||| Sbjct 733375 AACAGGTTCACGAATACCGTCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAA 733316 Query 18725 TGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAG 18784 | | | || |||||| || | | ||||||||| | || |||||||| || | ||| || Sbjct 733315 TACAGAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCAACCAATGTAAAG 733256 Query 18785 GCGGTTGTTTGTACTCGTAACCCAGTCACATAA 18817 |||||| | || || || | ||||| ||| || Sbjct 733255 GCGGTTTTCAGTGCTAGTTATCCAGTTACAGAA 733223 Score = 203 bits (224), Expect = 1e-47 Identities = 309/435 (71%), Gaps = 9/435 (2%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| ||||| |||||||||||||||||||| || ||||||||||| | |||||||| Sbjct 732828 AGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 732769 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCT---CCAGCTGCTACAAT 17950 ||| | || | | |||||||| ||| | || | ||| | | | ||||| Sbjct 732768 AGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACA-- 732711 Query 17951 GGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 18010 ||||||||||| ||||| ||||| || || |||||||||||| || || | || || Sbjct 732710 -GATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGT 732652 Query 18011 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTT 18070 | ||| || | || ||||||||||||| ||||||||||| | | |||||| Sbjct 732651 GAACCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTT 732592 Query 18071 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATA 18130 || |||||||| |||||||| | || ||||| || || ||||| || || |||||||| Sbjct 732591 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATA 732532 Query 18131 CGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTC 18190 || ||||| ||||| || ||| | || || | || ||| | | || || ||||| Sbjct 732531 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTTATTTTCTGTGGTTTC 732472 Query 18191 TCTAAT-AAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGA 18249 || || || | | || || || | || ||||||||| ||||| | || |||| Sbjct 732471 CCTGATCAAATTA-GAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGA 732413 Query 18250 ATACCCCTGC-AACA 18263 |||| || || |||| Sbjct 732412 ATACACCAGCTAACA 732398 >seq17466 Length=9900 Score = 347 bits (384), Expect = 4e-91 Identities = 422/568 (74%), Gaps = 13/568 (2%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| ||||| |||||||| ||||||||||| |||||||| ||||| | ||||| || Sbjct 9744 AGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATT 9685 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCT---CCAGCTGCTACAAT 17950 ||| | ||||| | |||||||| ||| | || | ||| | | | ||||| Sbjct 9684 AGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACA-- 9627 Query 17951 GGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 18010 ||||||||||| ||||||||||| || || || |||||||| || || | || || Sbjct 9626 -GATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 9568 Query 18011 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTT 18070 | ||| || | || |||||||||||||||||||| |||| | | ||||| Sbjct 9567 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 9508 Query 18071 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATA 18130 || |||||||| |||||||| | || ||||| || || ||||| || ||||| ||||| Sbjct 9507 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATA 9448 Query 18131 CGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTC 18190 |||||||||||||| |||||||| || || | || ||||||| ||||| ||||| Sbjct 9447 AGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTC 9388 Query 18191 TCTAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACC 18247 || || || | |||| || |||| || ||||||||| ||||| | || || Sbjct 9387 CCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCC 9331 Query 18248 GAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTG 18307 |||||| || || ||||| | ||| || || |||||||||||||| ||||| || || || Sbjct 9330 GAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTG 9271 Query 18308 GAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACT 18367 |||||| | ||| || ||||||||||| || || | ||||||||||||||||||||| Sbjct 9270 GAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACT 9211 Query 18368 CCCTTGTCCAAAAGGATAAA-CGAGAAA 18394 ||||| |||| |||||||| | ||||| Sbjct 9210 TCCTTGACCAATAGGATAAATCAAGAAA 9183 Score = 181 bits (200), Expect = 3e-41 Identities = 247/345 (72%), Gaps = 0/345 (0%) Strand=Plus/Minus Query 18466 TAAGTTCCCATTGTCGTCCCATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGA 18525 |||||||||| | || ||||| ||| || | || | | ||||| | ||||| | Sbjct 9169 TAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTA 9110 Query 18526 GTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGT 18585 | | ||| || || || || |||||||| || || | | |||||||||||| ||||||| Sbjct 9109 GCTCATAAGGACCGCCATTGTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGT 9050 Query 18586 AGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTC 18645 | || || | ||||| || ||| | || | || || || || || || ||||||| Sbjct 9049 AAAAATGCAATCCGATCGCCGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTC 8990 Query 18646 CATAGAGTAAGGCTCCTGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAG 18705 |||| ||||| | || || |||||||||||||||||||| || || || |||||||||| Sbjct 8989 CATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAG 8930 Query 18706 CAACAAATGCAATCAAAAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCC 18765 | | || || || | |||| | | || |||||| || | | ||||||||| | || | Sbjct 8929 CGATGAAGGCGATAATAAATACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACAC 8870 Query 18766 CAAACCACCCCACGTAGAGGCGGTTGTTTGTACTCGTAACCCAGT 18810 | ||||| || | ||| || ||||| | || || || | ||||| Sbjct 8869 CGAACCATCCGATGTAAAGACGGTTTTCGGTGCTAGTTATCCAGT 8825 >seq14178 Length=3042336 Score = 150 bits (166), Expect = 5e-32 Identities = 231/328 (70%), Gaps = 11/328 (3%) Strand=Plus/Plus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| ||||| |||||||||||| | ||||| || ||||||||||| || ||||| Sbjct 2899096 AGCTAGGTCTAGAGGGAAGTTATGACCTTTACGTTCATGCATAACTTCCGTACCGAGGTT 2899155 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||| | || | | |||||||| ||| | || | ||| || || || Sbjct 2899156 AGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCT-----TG-----ATAGA 2899205 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013 ||||||||| ||||| ||||| || || |||| |||||| || |||| || || | Sbjct 2899206 TTGGTTGAAATTGAAACCATTTAGGTTGCAAGCTATAGTGCTAATACCCAAAGCAGTGAA 2899265 Query 18014 CCATAT-GCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAA 18072 ||| || | | | || ||||||||||| ||||||||||| | | |||||| | Sbjct 2899266 CCAGATACCTACTACAGGCCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGA 2899325 Query 18073 AGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACG 18132 |||||||| |||||||| | || ||||| || || | ||| || || |||||||| | Sbjct 2899326 CACTAGCATATTGGAAGATCAATCAGCCAAAATAACCGTAAGCAGCTACGATATTATAAG 2899385 Query 18133 TCTCTTCTTCTTGGCCAAATTTATATCC 18160 | ||||| ||||| || ||| | || || Sbjct 2899386 TTTCTTCCTCTTGACCGAATCTGTAACC 2899413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151272399206400