Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq22333 504 2e-138 seq17466 358 2e-94 seq14178 203 9e-48 >seq22333 Length=1412734 Score = 504 bits (558), Expect = 2e-138 Identities = 691/963 (72%), Gaps = 2/963 (0%) Strand=Plus/Minus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || |||||||| || || || || |||||||| || || | |||||||| Sbjct 734205 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 734146 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 ||||| |||| ||| ||||||||||| || || || | || | | | | | | |||| Sbjct 734145 GCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 734086 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 ||||| || ||||||||||| | |||||||||||| || | || | |||| ||| Sbjct 734085 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAAC 734026 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710 || |||||||| |||||||| ||||| || |||||||| | | ||| ||||| || || Sbjct 734025 CAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAAA 733966 Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770 ||||||||||||||||| | || |||||||| ||||||||||| || ||||| ||||| Sbjct 733965 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATAAGTT 733906 Query 21771 TCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGA 21830 |||||||||||||| || ||||||| | || || | | ||| || || || | Sbjct 733905 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 733846 Query 21831 ATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACG 21890 || | || || |||| | ||| ||||||||| ||| | || || ||||| Sbjct 733845 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 733786 Query 21891 CCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACC 21950 || || || || | |||||| || || |||||||| || ||||||||||||||||| || Sbjct 733785 CCAGCTACGCCTAACATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACA 733726 Query 21951 AGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGT 22010 | |||| ||||||| || || || || || | |||||| ||||||||||| || || Sbjct 733725 ATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGA 733666 Query 22011 CCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACA 22070 || | || || | | ||| ||||||| ||| || || |||||||| || || |||||| Sbjct 733665 CCGATTGGGTAGATCAAGAAAACAGCAGCCGCTGCTGCAACAGGAGCTGAATATGCAACA 733606 Query 22071 AAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCA 22130 ||||| || | ||| || || || | |||||||||||||| || ||||||||| | Sbjct 733605 GCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAA 733546 Query 22131 AAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCAT 22190 || |||| | |||||| | || | || | | |||||||| ||||| | |||| Sbjct 733545 GCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACCAT 733486 Query 22191 TCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTC 22250 ||||||| | || |||||||| || ||||| || || | ||||| || | | Sbjct 733485 TCATCAACGGATGCCGCTTCCCATATCGGGTAAAAATGCAAACCGATAGCTGCAGAAGTA 733426 Query 22251 GGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCT 22310 |||| | || || || || || ||||| ||||| | || || |||| || ||||| Sbjct 733425 GGAATAATCGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCA 733366 Query 22311 CGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTA 22370 || || || || || || || || || || ||| |||||||||||||| || || Sbjct 733365 CGAATACCGTCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACAGAAGTT 733306 Query 22371 GCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTTATT 22429 |||| ||| | | | || ||||| | || || ||||| || | ||||| ||||| | Sbjct 733305 GCGGTCAATAAAGTA-GGGATCATCAAAACACCAAACCAACCAATGTAAAGGCGGTTTTC 733247 Query 22430 AGT 22432 ||| Sbjct 733246 AGT 733244 Score = 259 bits (286), Expect = 1e-64 Identities = 253/326 (78%), Gaps = 0/326 (0%) Strand=Plus/Minus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || |||||||| || || || || |||||||| || || | |||||||| Sbjct 732827 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 732768 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 ||||| |||| ||| ||||||||||| || || || | || | | | | | | |||| Sbjct 732767 GCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 732708 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 ||||| || ||||||||||| | |||||||||||| || | || | |||| ||| Sbjct 732707 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAAC 732648 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710 || |||||||| |||||||| ||||| || |||||||| | | ||| ||||| || || Sbjct 732647 CAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAAA 732588 Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770 ||||||||||||||||| | || |||||||| ||||||||||| || ||||| ||||| Sbjct 732587 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATAAGTT 732528 Query 21771 TCTTCCTCTTGACCAAACTTGTAACC 21796 |||||||||||||| || ||||||| Sbjct 732527 TCTTCCTCTTGACCGAATCTGTAACC 732502 >seq17466 Length=9900 Score = 358 bits (396), Expect = 2e-94 Identities = 423/573 (74%), Gaps = 0/573 (0%) Strand=Plus/Minus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || ||||||||||| || || || || ||||| || || | ||||| || Sbjct 9743 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 9684 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 |||||||| | || |||||||| || || || || | || | | | | | | |||| Sbjct 9683 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 9624 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 ||||| || ||||| ||||| | |||||| ||||| ||| | || | |||| ||| Sbjct 9623 TGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGAAC 9564 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710 || || ||||| |||||||| ||||| | ||||| || | | ||| || || || || Sbjct 9563 CAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 9504 Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770 ||||||||||||||||| | ||||||||||| ||||||||||| ||||| || |||||| Sbjct 9503 CTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATAAGTC 9444 Query 21771 TCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGA 21830 ||||| ||||||||||| |||||||| | || || | | |||||| || || | Sbjct 9443 TCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCCTG 9384 Query 21831 ATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACG 21890 || | || || |||| | ||| ||||||||| ||| | || || ||||| Sbjct 9383 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACA 9324 Query 21891 CCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACC 21950 || || ||||| | ||||||||| ||||||||||| || |||||||| |||||||| || Sbjct 9323 CCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAATACA 9264 Query 21951 AGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGT 22010 | ||| ||||||| || || ||||| || || |||||| ||||||| ||| || || Sbjct 9263 ATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGA 9204 Query 22011 CCAAACGGATAAACAAGGAACACAGCAGTCGCA 22043 |||| ||||||| | ||| |||||||| ||| Sbjct 9203 CCAATAGGATAAATCAAGAAAACAGCAGTAGCA 9171 Score = 145 bits (160), Expect = 2e-30 Identities = 233/329 (71%), Gaps = 8/329 (2%) Strand=Plus/Minus Query 22102 TAAGTTCCCACTCTCGTCCCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGA 22161 ||||||||||||| || ||||| ||| | || |||| | |||||| | || | | Sbjct 9169 TAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTA 9110 Query 22162 GTTGGAATGGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGT 22221 | | | |||||||| ||||| | ||||||||||| | ||||||||||||||||||| Sbjct 9109 GCTCATAAGGACCGCCATTGTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGT 9050 Query 22222 AGAAGTGTAGTCCGATGGCATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTAC 22281 | || || | |||||| || | | |||| | || || || || || ||||| | Sbjct 9049 AAAAATGCAATCCGATCGCCGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTC 8990 Query 22282 CATACAACAGGGAGCCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGC 22341 |||| | | || |||| || || || || || ||||| || || || || || || Sbjct 8989 CATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAG 8930 Query 22342 CAACAAAGGCGATAATAAA-AC--AAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGG 22397 | | |||||||||||||| || ||||| |||| ||| ||| | || ||||| | Sbjct 8929 CGATGAAGGCGATAATAAATACGGAAGTT---GCGGTCAATAAGGTA-GGGATCATCAAA 8874 Query 22398 ACTCCGAACCATCCTACATAAAGACGGTT 22426 || ||||||||||| | ||||||||||| Sbjct 8873 ACACCGAACCATCCGATGTAAAGACGGTT 8845 >seq14178 Length=3042336 Score = 203 bits (224), Expect = 9e-48 Identities = 241/327 (74%), Gaps = 11/327 (3%) Strand=Plus/Plus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || |||||||| || | || || |||||||| || || || ||||| Sbjct 2899097 GCTAGGTCTAGAGGGAAGTTATGACCTTTACGTTCATGCATAACTTCCGTACCGAGGTTA 2899156 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 ||||| |||| ||| ||||||||||| || || || | || | | |||| Sbjct 2899157 GCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGAT----------AGAT 2899206 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 ||||| || ||||||||||| | |||| |||| || || | || | |||| ||| Sbjct 2899207 TGGTTGAAATTGAAACCATTTAGGTTGCAAGCTATAGTGCTAATACCCAAAGCAGTGAAC 2899266 Query 21651 CAAATACCTACAACAGGCC-AGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAA 21709 || |||||||| ||||||| | ||||| || |||||||| | | ||| ||||| || | Sbjct 2899267 CAGATACCTACTACAGGCCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAC 2899326 Query 21710 GCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGT 21769 ||||||||||||||||| | | |||||||| |||| |||||| || ||||| ||||| Sbjct 2899327 ACTAGCATATTGGAAGATCAATCAGCCAAAATAACCGTAAGCAGCTACGATATTATAAGT 2899386 Query 21770 CTCTTCCTCTTGACCAAACTTGTAACC 21796 |||||||||||||| || ||||||| Sbjct 2899387 TTCTTCCTCTTGACCGAATCTGTAACC 2899413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146163552768000