Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_020855.1
Length=192497
Score E
Sequences producing significant alignments: (Bits) Value
seq22333 520 1e-142
seq17466 394 1e-104
seq14178 163 3e-35
seq3005 91.5 2e-13
>seq22333
Length=1412734
Score = 520 bits (576), Expect = 1e-142
Identities = 704/976 (72%), Gaps = 4/976 (0%)
Strand=Plus/Minus
Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950
|||| ||||| |||||||| || ||||| | ||||||||||||||||||||| | |||
Sbjct 734205 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 734146
Query 7951 GCTCTGTTTAATACG-TCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGA 8009
|| | | |||||| ||| |||| ||| ||| | ||| | | |||||| || ||
Sbjct 734145 GCAC-GATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGA 734087
Query 8010 TTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAA 8069
|||||| || || || || || ||||| || ||||| |||| |||||| | || ||| ||
Sbjct 734086 TTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAA 734027
Query 8070 CCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AA 8128
||| | || ||| || || | | ||| |||||||| || | | | | ||||| ||
Sbjct 734026 CCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAA 733967
Query 8129 ACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGG 8188
|| | ||||| |||||||| |||| ||||| || || |||||||| || |||||||| |
Sbjct 733966 ACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATAAG 733908
Query 8189 TCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTC 8248
| ||||| |||||||| || | ||||| | || ||| || | ||| || || || |
Sbjct 733907 TTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCC 733848
Query 8249 TGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACA 8308
|||| | | ||| || || || ||||| |||||||||||||| || || || ||||| |
Sbjct 733847 TGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATA 733788
Query 8309 TACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATA 8368
||| ||||| ||| ||| ||||| || |||||||| ||||| ||||| || |||||||
Sbjct 733787 CACCAGCTACGCCTAACATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATA 733728
Query 8369 CGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCT 8428
| | ||||||||| || |||||||| || ||||||||||| |||||||| || || |
Sbjct 733727 CAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTT 733668
Query 8429 GACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTA 8488
|||| | ||| || | ||||| || || || || | || ||||| |||||| |
Sbjct 733667 GACCGATTGGGTAGATCAAGAAAACAGCAGCCGCTGCTGCAACAGGAGCTGAATATGCAA 733608
Query 8489 CACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAG 8548
|| ||||| || | |||||| | ||| | | ||||||| | ||||||||||
Sbjct 733607 CAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAAC 733548
Query 8549 CAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACC 8608
|| | |||| | |||||| | | || | || ||| ||||| || || || ||||
Sbjct 733547 AAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACC 733488
Query 8609 ACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAG 8668
| ||||| | | || |||||||| || || || || || || || ||||| ||||
Sbjct 733487 ATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAATGCAAACCGATAGCTGCAGAAG 733428
Query 8669 ATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTT 8728
|||| | |||||||| || || ||||||||||| | | || || | ||||||||
Sbjct 733427 TAGGAATAATCGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTT 733368
Query 8729 CACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAG 8788
||||||||||||| ||||| || || ||||||||||| || || | ||||| || ||
Sbjct 733367 CACGAATACCGTCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACAGAAG 733308
Query 8789 CAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGT 8848
|| | || || ||| ||||| | ||| ||||||||||| | ||||| | ||| |
Sbjct 733307 TTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCAACCAATGTAAAGGCGGTTTT 733248
Query 8849 TTGTACTTGTAACCCA 8864
|| || || | |||
Sbjct 733247 CAGTGCTAGTTATCCA 733232
Score = 246 bits (272), Expect = 4e-60
Identities = 315/429 (73%), Gaps = 4/429 (1%)
Strand=Plus/Minus
Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950
|||| ||||| |||||||| || ||||| | ||||||||||||||||||||| | |||
Sbjct 732827 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 732768
Query 7951 GCTCTGTTTAATACG-TCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGA 8009
|| | | |||||| ||| |||| ||| ||| | ||| | | |||||| || ||
Sbjct 732767 GCAC-GATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGA 732709
Query 8010 TTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAA 8069
|||||| || || || || || ||||| || ||||| |||| |||||| | || ||| ||
Sbjct 732708 TTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAA 732649
Query 8070 CCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AA 8128
||| | || ||| || || | | ||| |||||||| || | | | | ||||| ||
Sbjct 732648 CCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAA 732589
Query 8129 ACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGG 8188
|| | ||||| |||||||| |||| ||||| || || |||||||| || |||||||| |
Sbjct 732588 ACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATAAG 732530
Query 8189 TCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTC 8248
| ||||| |||||||| || | ||||| | || ||| | | ||| || || || |
Sbjct 732529 TTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTTATTTTCTGTGGTTTCCC 732470
Query 8249 TGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACA 8308
|||| | | ||| || || || ||||| |||||||||||||| || || || ||||| |
Sbjct 732469 TGATCAAATTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATA 732410
Query 8309 TACCTGCTA 8317
||| ||||
Sbjct 732409 CACCAGCTA 732401
>seq17466
Length=9900
Score = 394 bits (436), Expect = 1e-104
Identities = 429/567 (76%), Gaps = 2/567 (0%)
Strand=Plus/Minus
Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950
|||| ||||| ||||||||||| ||||| | ||| ||||| ||||||||||| | ||
Sbjct 9743 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 9684
Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010
|| | ||| | | ||| |||| ||| ||| | ||| | | |||||| || |||
Sbjct 9683 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 9624
Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070
||||| || || ||||| || ||||| |||||||| || | |||||| | || ||| |||
Sbjct 9623 TGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGAAC 9564
Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAA 8129
|| | | ||| || || | | ||| | ||||||||| | | | | |||||| |||
Sbjct 9563 CAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 9504
Query 8130 CGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGT 8189
| | ||||| ||||||||||||| |||||| || || |||||||| ||||| ||||| ||
Sbjct 9503 CTA-GCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATAAGT 9445
Query 8190 CTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCT 8249
|||||||||||||||||| || ||||| | || |||||| | |||||| || || ||
Sbjct 9444 CTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCCT 9385
Query 8250 GATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACAT 8309
||| | | ||| || || || ||||| |||||||||||||| || || || ||||| |
Sbjct 9384 GATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATAC 9325
Query 8310 ACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATAC 8369
||| ||||| ||| ||| || || ||||||||||| ||||| ||||| || ||||||||
Sbjct 9324 ACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAATAC 9265
Query 8370 GAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTG 8429
| ||| ||||| || |||||||| || |||| |||||| ||||||||||| || ||
Sbjct 9264 AATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTG 9205
Query 8430 ACCAAATGGATATACTAAGAACACTGC 8456
||||| ||||| | ||||| || ||
Sbjct 9204 ACCAATAGGATAAATCAAGAAAACAGC 9178
Score = 167 bits (184), Expect = 3e-36
Identities = 245/347 (71%), Gaps = 0/347 (0%)
Strand=Plus/Minus
Query 8527 TCCCACTGTCTACCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGA 8586
||||||| | |||||| ||| || | |||| | |||||| | | || | || |
Sbjct 9164 TCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCA 9105
Query 8587 TATGGACCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAG 8646
|| ||||| || || || ||||| ||||| | | |||||||||||||| || || ||
Sbjct 9104 TAAGGACCGCCATTGTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAA 9045
Query 8647 TGTAATCCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATAC 8706
|| ||||| || || |||| |||| | ||||||||| || || |||||||||||
Sbjct 9044 TGCAATCCGATCGCCGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAA 8985
Query 8707 ATGAATGAACCTGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATA 8766
| || ||||| | |||||| ||||||||||| || ||||| || || |||||||| ||
Sbjct 8984 AGTAAAGAACCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATG 8925
Query 8767 AATGCCACGATAAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAAC 8826
|| || | ||||| | || || | || ||| ||| ||||| | ||| || |||
Sbjct 8924 AAGGCGATAATAAATACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAAC 8865
Query 8827 CAACCGACATAAAGTCTGTTGTTTGTACTTGTAACCCACTCGCAAAA 8873
|| |||| ||||| | ||| | || || || | ||| | ||| ||
Sbjct 8864 CATCCGATGTAAAGACGGTTTTCGGTGCTAGTTATCCAGTTGCAGAA 8818
>seq14178
Length=3042336
Score = 163 bits (180), Expect = 3e-35
Identities = 282/402 (70%), Gaps = 16/402 (4%)
Strand=Plus/Plus
Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950
|||| ||||| |||||||| || | || | |||||||||||||||| |||| | |||
Sbjct 2899097 GCTAGGTCTAGAGGGAAGTTATGACCTTTACGTTCATGCATAACTTCCGTACCGAGGTTA 2899156
Query 7951 GCTCTGTTTAATACG-TCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGA 8009
|| | | |||||| ||| |||| ||| ||| | ||| || | | ||
Sbjct 2899157 GCAC-GATTAATAATATCAGCCCAGGTATTAATTACACGACC-TTGATA---------GA 2899205
Query 8010 TTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAA 8069
|||||| || || || || || ||||| | || || |||| |||||||| || ||| ||
Sbjct 2899206 TTGGTTGAAATTGAAACCATTTAGGTTGCAAGCTATAGTGCTAATACCCAAAGCAGTGAA 2899265
Query 8070 CCAAACACATACAACTGGGA-ATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAA 8128
||| | || ||| || || | | ||| |||||||| || | | | | ||||| |
Sbjct 2899266 CCAGATACCTACTACAGGCCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGA 2899325
Query 8129 -ACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAG 8187
|| | ||||| |||||||| |||| ||||| || || | |||||| || ||||||||
Sbjct 2899326 CACTA-GCATATTGGAAGATCAATCAGCCAAAATAACCGTAAGCAGCTACGATATTATAA 2899384
Query 8188 GTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCT 8247
|| ||||| |||||||| || | ||||| | || ||| || | || || || ||
Sbjct 2899385 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTATGTGGTTTCC 2899444
Query 8248 CTGATTAGAGAAGATGT-AACTAAAGAACCGTGCATAGCACT 8288
||||| | | ||| || ||| || ||||| |||||||||||
Sbjct 2899445 CTGATCAAACTAGAGGTTAACCAAGGAACCATGCATAGCACT 2899486
>seq3005
Length=2476929
Score = 91.5 bits (100), Expect = 2e-13
Identities = 182/269 (68%), Gaps = 18/269 (7%)
Strand=Plus/Plus
Query 8134 GCATACTGGAAG-ATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTC 8192
||||| |||| || |||| ||||| || |||||||||| ||||||| || || ||
Sbjct 2014057 GCATATCAGAAGTATCAATCAGCCAAAATAAACATGAGCAGCTACAATATCTTAAGTTTC 2014116
Query 8193 TTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGAT 8252
||| ||| ||||||| | || | | || |||| || | ||| || || || | |||
Sbjct 2014117 TTCCTCTGGACCAAATCTGTATCTTTCCTTGGGAGATTCATTTTCTGTGGTTTCCCGGAT 2014176
Query 8253 TAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACC 8312
| | ||| || || || |||||||||| || || || || |||| |||
Sbjct 2014177 CAAACTAGAGGTTACCAAGTAACCGTGCAT----------AGGGAACCGCCAAACACACC 2014226
Query 8313 TGCTACCCCT--GCCATA-----TGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGA 8365
|||| ||| | |||| ||||| | ||||| ||| ||| | ||||| || |||
Sbjct 2014227 AGCTAAGCCTTAGTCATAAAATGTGGAATGAATGCACAAGGATGCTGTGCTCGGCCCGGA 2014286
Query 8366 ATACGAACATGAAGTTAAACGTACCAGAA 8394
|||| ||||||| || ||||| |||
Sbjct 2014287 ATACAGTAGTGAAGTTGAAAGTACCGGAA 2014315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 615665324032000
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