Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq22333 520 1e-142 seq17466 394 1e-104 seq14178 163 3e-35 seq3005 91.5 2e-13 >seq22333 Length=1412734 Score = 520 bits (576), Expect = 1e-142 Identities = 704/976 (72%), Gaps = 4/976 (0%) Strand=Plus/Minus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| ||||| |||||||| || ||||| | ||||||||||||||||||||| | ||| Sbjct 734205 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 734146 Query 7951 GCTCTGTTTAATACG-TCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGA 8009 || | | |||||| ||| |||| ||| ||| | ||| | | |||||| || || Sbjct 734145 GCAC-GATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGA 734087 Query 8010 TTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAA 8069 |||||| || || || || || ||||| || ||||| |||| |||||| | || ||| || Sbjct 734086 TTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAA 734027 Query 8070 CCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AA 8128 ||| | || ||| || || | | ||| |||||||| || | | | | ||||| || Sbjct 734026 CCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAA 733967 Query 8129 ACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGG 8188 || | ||||| |||||||| |||| ||||| || || |||||||| || |||||||| | Sbjct 733966 ACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATAAG 733908 Query 8189 TCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTC 8248 | ||||| |||||||| || | ||||| | || ||| || | ||| || || || | Sbjct 733907 TTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCC 733848 Query 8249 TGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACA 8308 |||| | | ||| || || || ||||| |||||||||||||| || || || ||||| | Sbjct 733847 TGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATA 733788 Query 8309 TACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATA 8368 ||| ||||| ||| ||| ||||| || |||||||| ||||| ||||| || ||||||| Sbjct 733787 CACCAGCTACGCCTAACATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATA 733728 Query 8369 CGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCT 8428 | | ||||||||| || |||||||| || ||||||||||| |||||||| || || | Sbjct 733727 CAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTT 733668 Query 8429 GACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTA 8488 |||| | ||| || | ||||| || || || || | || ||||| |||||| | Sbjct 733667 GACCGATTGGGTAGATCAAGAAAACAGCAGCCGCTGCTGCAACAGGAGCTGAATATGCAA 733608 Query 8489 CACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAG 8548 || ||||| || | |||||| | ||| | | ||||||| | |||||||||| Sbjct 733607 CAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAAC 733548 Query 8549 CAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACC 8608 || | |||| | |||||| | | || | || ||| ||||| || || || |||| Sbjct 733547 AAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACC 733488 Query 8609 ACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAG 8668 | ||||| | | || |||||||| || || || || || || || ||||| |||| Sbjct 733487 ATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAATGCAAACCGATAGCTGCAGAAG 733428 Query 8669 ATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTT 8728 |||| | |||||||| || || ||||||||||| | | || || | |||||||| Sbjct 733427 TAGGAATAATCGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTT 733368 Query 8729 CACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAG 8788 ||||||||||||| ||||| || || ||||||||||| || || | ||||| || || Sbjct 733367 CACGAATACCGTCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACAGAAG 733308 Query 8789 CAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGT 8848 || | || || ||| ||||| | ||| ||||||||||| | ||||| | ||| | Sbjct 733307 TTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCAACCAATGTAAAGGCGGTTTT 733248 Query 8849 TTGTACTTGTAACCCA 8864 || || || | ||| Sbjct 733247 CAGTGCTAGTTATCCA 733232 Score = 246 bits (272), Expect = 4e-60 Identities = 315/429 (73%), Gaps = 4/429 (1%) Strand=Plus/Minus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| ||||| |||||||| || ||||| | ||||||||||||||||||||| | ||| Sbjct 732827 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 732768 Query 7951 GCTCTGTTTAATACG-TCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGA 8009 || | | |||||| ||| |||| ||| ||| | ||| | | |||||| || || Sbjct 732767 GCAC-GATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGA 732709 Query 8010 TTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAA 8069 |||||| || || || || || ||||| || ||||| |||| |||||| | || ||| || Sbjct 732708 TTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAA 732649 Query 8070 CCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AA 8128 ||| | || ||| || || | | ||| |||||||| || | | | | ||||| || Sbjct 732648 CCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAA 732589 Query 8129 ACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGG 8188 || | ||||| |||||||| |||| ||||| || || |||||||| || |||||||| | Sbjct 732588 ACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATAAG 732530 Query 8189 TCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTC 8248 | ||||| |||||||| || | ||||| | || ||| | | ||| || || || | Sbjct 732529 TTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTTATTTTCTGTGGTTTCCC 732470 Query 8249 TGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACA 8308 |||| | | ||| || || || ||||| |||||||||||||| || || || ||||| | Sbjct 732469 TGATCAAATTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATA 732410 Query 8309 TACCTGCTA 8317 ||| |||| Sbjct 732409 CACCAGCTA 732401 >seq17466 Length=9900 Score = 394 bits (436), Expect = 1e-104 Identities = 429/567 (76%), Gaps = 2/567 (0%) Strand=Plus/Minus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| ||||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || Sbjct 9743 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 9684 Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010 || | ||| | | ||| |||| ||| ||| | ||| | | |||||| || ||| Sbjct 9683 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 9624 Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070 ||||| || || ||||| || ||||| |||||||| || | |||||| | || ||| ||| Sbjct 9623 TGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGAAC 9564 Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-AAA 8129 || | | ||| || || | | ||| | ||||||||| | | | | |||||| ||| Sbjct 9563 CAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 9504 Query 8130 CGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGT 8189 | | ||||| ||||||||||||| |||||| || || |||||||| ||||| ||||| || Sbjct 9503 CTA-GCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATAAGT 9445 Query 8190 CTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCT 8249 |||||||||||||||||| || ||||| | || |||||| | |||||| || || || Sbjct 9444 CTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCCT 9385 Query 8250 GATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACAT 8309 ||| | | ||| || || || ||||| |||||||||||||| || || || ||||| | Sbjct 9384 GATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATAC 9325 Query 8310 ACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATAC 8369 ||| ||||| ||| ||| || || ||||||||||| ||||| ||||| || |||||||| Sbjct 9324 ACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAATAC 9265 Query 8370 GAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTG 8429 | ||| ||||| || |||||||| || |||| |||||| ||||||||||| || || Sbjct 9264 AATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTG 9205 Query 8430 ACCAAATGGATATACTAAGAACACTGC 8456 ||||| ||||| | ||||| || || Sbjct 9204 ACCAATAGGATAAATCAAGAAAACAGC 9178 Score = 167 bits (184), Expect = 3e-36 Identities = 245/347 (71%), Gaps = 0/347 (0%) Strand=Plus/Minus Query 8527 TCCCACTGTCTACCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGA 8586 ||||||| | |||||| ||| || | |||| | |||||| | | || | || | Sbjct 9164 TCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCA 9105 Query 8587 TATGGACCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAG 8646 || ||||| || || || ||||| ||||| | | |||||||||||||| || || || Sbjct 9104 TAAGGACCGCCATTGTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAA 9045 Query 8647 TGTAATCCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATAC 8706 || ||||| || || |||| |||| | ||||||||| || || ||||||||||| Sbjct 9044 TGCAATCCGATCGCCGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAA 8985 Query 8707 ATGAATGAACCTGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATA 8766 | || ||||| | |||||| ||||||||||| || ||||| || || |||||||| || Sbjct 8984 AGTAAAGAACCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATG 8925 Query 8767 AATGCCACGATAAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAAC 8826 || || | ||||| | || || | || ||| ||| ||||| | ||| || ||| Sbjct 8924 AAGGCGATAATAAATACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAAC 8865 Query 8827 CAACCGACATAAAGTCTGTTGTTTGTACTTGTAACCCACTCGCAAAA 8873 || |||| ||||| | ||| | || || || | ||| | ||| || Sbjct 8864 CATCCGATGTAAAGACGGTTTTCGGTGCTAGTTATCCAGTTGCAGAA 8818 >seq14178 Length=3042336 Score = 163 bits (180), Expect = 3e-35 Identities = 282/402 (70%), Gaps = 16/402 (4%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| ||||| |||||||| || | || | |||||||||||||||| |||| | ||| Sbjct 2899097 GCTAGGTCTAGAGGGAAGTTATGACCTTTACGTTCATGCATAACTTCCGTACCGAGGTTA 2899156 Query 7951 GCTCTGTTTAATACG-TCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGA 8009 || | | |||||| ||| |||| ||| ||| | ||| || | | || Sbjct 2899157 GCAC-GATTAATAATATCAGCCCAGGTATTAATTACACGACC-TTGATA---------GA 2899205 Query 8010 TTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAA 8069 |||||| || || || || || ||||| | || || |||| |||||||| || ||| || Sbjct 2899206 TTGGTTGAAATTGAAACCATTTAGGTTGCAAGCTATAGTGCTAATACCCAAAGCAGTGAA 2899265 Query 8070 CCAAACACATACAACTGGGA-ATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAA 8128 ||| | || ||| || || | | ||| |||||||| || | | | | ||||| | Sbjct 2899266 CCAGATACCTACTACAGGCCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGA 2899325 Query 8129 -ACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAG 8187 || | ||||| |||||||| |||| ||||| || || | |||||| || |||||||| Sbjct 2899326 CACTA-GCATATTGGAAGATCAATCAGCCAAAATAACCGTAAGCAGCTACGATATTATAA 2899384 Query 8188 GTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCT 8247 || ||||| |||||||| || | ||||| | || ||| || | || || || || Sbjct 2899385 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTATGTGGTTTCC 2899444 Query 8248 CTGATTAGAGAAGATGT-AACTAAAGAACCGTGCATAGCACT 8288 ||||| | | ||| || ||| || ||||| ||||||||||| Sbjct 2899445 CTGATCAAACTAGAGGTTAACCAAGGAACCATGCATAGCACT 2899486 >seq3005 Length=2476929 Score = 91.5 bits (100), Expect = 2e-13 Identities = 182/269 (68%), Gaps = 18/269 (7%) Strand=Plus/Plus Query 8134 GCATACTGGAAG-ATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTC 8192 ||||| |||| || |||| ||||| || |||||||||| ||||||| || || || Sbjct 2014057 GCATATCAGAAGTATCAATCAGCCAAAATAAACATGAGCAGCTACAATATCTTAAGTTTC 2014116 Query 8193 TTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGAT 8252 ||| ||| ||||||| | || | | || |||| || | ||| || || || | ||| Sbjct 2014117 TTCCTCTGGACCAAATCTGTATCTTTCCTTGGGAGATTCATTTTCTGTGGTTTCCCGGAT 2014176 Query 8253 TAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACC 8312 | | ||| || || || |||||||||| || || || || |||| ||| Sbjct 2014177 CAAACTAGAGGTTACCAAGTAACCGTGCAT----------AGGGAACCGCCAAACACACC 2014226 Query 8313 TGCTACCCCT--GCCATA-----TGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGA 8365 |||| ||| | |||| ||||| | ||||| ||| ||| | ||||| || ||| Sbjct 2014227 AGCTAAGCCTTAGTCATAAAATGTGGAATGAATGCACAAGGATGCTGTGCTCGGCCCGGA 2014286 Query 8366 ATACGAACATGAAGTTAAACGTACCAGAA 8394 |||| ||||||| || ||||| ||| Sbjct 2014287 ATACAGTAGTGAAGTTGAAAGTACCGGAA 2014315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615665324032000