Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq22333 504 2e-138 seq17466 358 2e-94 seq14178 203 9e-48 >seq22333 Length=1412734 Score = 504 bits (558), Expect = 2e-138 Identities = 691/963 (72%), Gaps = 2/963 (0%) Strand=Plus/Plus Query 41255 ACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-C 41313 ||| | ||||| ||||| | || ||||| || || | ||||| || | | | ||| | Sbjct 733244 ACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCC-TACTTTATTGAC 733302 Query 41314 CGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAAT 41373 ||| || || |||||||||||||| ||| || || || || || || || || || Sbjct 733303 CGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGACGGTAT 733362 Query 41374 CCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGT 41433 || ||||| || |||| || || | ||||| ||||| || || || || || | | Sbjct 733363 TCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTAT 733422 Query 41434 TCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGA 41493 ||| | | || ||||| | || || ||||| || |||||||| || | |||| Sbjct 733423 TCCTACTTCTGCAGCTATCGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGA 733482 Query 41494 TGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGT 41553 ||||||| | ||||| |||||||| | | || | || | |||||| | |||| || Sbjct 733483 TGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 733542 Query 41554 CTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGAT 41613 | ||||||||| || |||||||||||||| | || || || ||| | || ||||| Sbjct 733543 AGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGAT 733602 Query 41614 CTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTT 41673 |||||| || || |||||||| || || ||| ||||||| ||| | | || || | Sbjct 733603 TGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCTGCTGTTTTCTTGATCTACCCAAT 733662 Query 41674 TGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACAT 41733 || || || ||||||||||| |||||| | || || || || || ||||||| ||| Sbjct 733663 CGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCAT 733722 Query 41734 GCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGC 41793 | | || ||||||||||||||||| || |||||||| || || |||||| | || || || Sbjct 733723 GATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCGTAGC 733782 Query 41794 CGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACT 41853 || ||||| || || | ||| ||||||||| ||| | |||| || || | Sbjct 733783 TGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 733842 Query 41854 CATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGA 41913 || | || || || ||| | | || || | ||||||| || ||||||||||| Sbjct 733843 GATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGA 733902 Query 41914 AGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGC 41973 ||| ||||| ||||| || ||||||||||| |||||||| || | |||||||||||||| Sbjct 733903 AGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGC 733962 Query 41974 TAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTAT 42033 ||| || || ||||| ||| | | |||||||| || ||||| |||||||| |||||||| Sbjct 733963 TAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGGTAT 734022 Query 42034 TTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAA 42093 ||||| |||| | || | || |||||||||||| | ||||||||||| || || Sbjct 734023 CTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAA 734082 Query 42094 CCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAACCG 42153 ||||||| | | | | | | || | || || || ||||||||||| ||| |||| || Sbjct 734083 CCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCG 734142 Query 42154 TGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCCGCTTGACCT 42213 ||| |||||||| | || || |||||||| || || || || |||||||| || ||||| Sbjct 734143 TGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCT 734202 Query 42214 TGC 42216 || Sbjct 734203 AGC 734205 Score = 259 bits (286), Expect = 1e-64 Identities = 253/326 (78%), Gaps = 0/326 (0%) Strand=Plus/Plus Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 ||||||| || |||||||||||||| ||||| ||||| || ||||||||||| |||||| Sbjct 732502 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTT 732561 Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010 || || | ||||||||||||||||| || || ||||| ||| | | |||||||| || Sbjct 732562 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTG 732621 Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTC 42070 ||||| |||||||| |||||||| ||||| |||| | || | || ||||||||| Sbjct 732622 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTC 732681 Query 42071 AACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAAC 42130 ||| | ||||||||||| || ||||||||| | | | | | | || | || || || Sbjct 732682 AACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 732741 Query 42131 ACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAAC 42190 ||||||||||| ||| |||| ||||| |||||||| | || || |||||||| || || Sbjct 732742 ACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 732801 Query 42191 GCACACAACTTCCCGCTTGACCTTGC 42216 || || |||||||| || ||||| || Sbjct 732802 GCTCATAACTTCCCTCTAGACCTAGC 732827 >seq17466 Length=9900 Score = 358 bits (396), Expect = 2e-94 Identities = 423/573 (74%), Gaps = 0/573 (0%) Strand=Plus/Plus Query 41644 TGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCC 41703 ||| |||||||| ||| | ||||||| |||| || || ||| ||||||| |||||| Sbjct 9171 TGCTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCC 9230 Query 41704 CTTGGGGATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCT 41763 || || ||||| || || ||||||| ||| | || |||||||| |||||||| || || Sbjct 9231 TTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCT 9290 Query 41764 TATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGC 41823 ||||||||| ||||||||| | ||||| || || ||||| || || | ||| ||| Sbjct 9291 TATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGC 9350 Query 41824 TATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACA 41883 |||||| ||| | |||| || || | || | || || |||||| | | || Sbjct 9351 TATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGC 9410 Query 41884 GAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGG 41943 || | |||||||| ||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct 9411 TAATGAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGG 9470 Query 41944 CTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTT 42003 ||||||||||| | ||||||||||||||||| || || || || ||| | | || || Sbjct 9471 TTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTT 9530 Query 42004 CTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCAT 42063 ||| | ||||| |||||||| ||||| || ||||| |||| | || | ||| || Sbjct 9531 CTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTAT 9590 Query 42064 GGCTTTCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGT 42123 ||| |||||| | ||||| ||||| || ||||||||| | | | | | | || | || Sbjct 9591 GGCATTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGT 9650 Query 42124 GATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGA 42183 || || || |||||||| || | |||||||| || ||||| | || || ||||| || Sbjct 9651 TATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGA 9710 Query 42184 GCGGAACGCACACAACTTCCCGCTTGACCTTGC 42216 || || || ||||||||||| || ||||| || Sbjct 9711 ACGTAATGCTCACAACTTCCCTCTAGACCTAGC 9743 Score = 145 bits (160), Expect = 2e-30 Identities = 233/329 (71%), Gaps = 8/329 (2%) Strand=Plus/Plus Query 41261 AACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-CCGCTAC 41319 ||||||||||| | ||||||||||| || | ||||| || | ||| ||| |||| Sbjct 8845 AACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCC-TACCTTATTGACCGC--- 8900 Query 41320 AACTT--GT-TTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAATCCG 41376 ||||| || |||||||||||||| | | || || || || || || ||||| || || Sbjct 8901 AACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCG 8960 Query 41377 AGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGTTCC 41436 || || || |||| || | | ||||| ||||| || || || || || | |||| Sbjct 8961 TGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCC 9020 Query 41437 GAGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGA 41496 | | || |||||| | || || |||||||||||||||||||| | ||||||| Sbjct 9021 TACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGA 9080 Query 41497 ATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTT 41556 |||| | ||||| |||||||| | | || | || | |||||| | |||| || Sbjct 9081 ATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGC 9140 Query 41557 TGCTTACATGGGACGAGAGTGGGAACTTA 41585 | ||| ||||| || ||||||||||||| Sbjct 9141 TTGTTATATGGGTCGTGAGTGGGAACTTA 9169 >seq14178 Length=3042336 Score = 203 bits (224), Expect = 9e-48 Identities = 241/327 (74%), Gaps = 11/327 (3%) Strand=Plus/Minus Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 ||||||| || |||||||||||||| ||||| ||||| || |||||| |||| |||||| Sbjct 2899413 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTACGGTTATTTT 2899354 Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010 || | | ||||||||||||||||| | || ||||| ||| | | |||||||| || Sbjct 2899353 GGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTACATTTCTTCCTG 2899294 Query 42011 GCTGCCT-GGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTT 42069 ||||| | ||||||| |||||||| ||||| |||| | || | || || |||| Sbjct 2899293 GCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTAGCACTATAGCTTG 2899234 Query 42070 CAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAA 42129 |||| | ||||||||||| || ||||||||| | | || | || || || Sbjct 2899233 CAACCTAAATGGTTTCAATTTCAACCAATCT----------ATCAAGGTCGTGTAATTAA 2899184 Query 42130 CACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAA 42189 ||||||||||| ||| |||| ||||| ||||| || || || |||||||| || || Sbjct 2899183 TACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATGCATGAACGTAA 2899124 Query 42190 CGCACACAACTTCCCGCTTGACCTTGC 42216 | || |||||||| || ||||| || Sbjct 2899123 AGGTCATAACTTCCCTCTAGACCTAGC 2899097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146169950822400