Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq22333 592 5e-165 seq17466 354 2e-93 seq14178 170 5e-38 seq23661 98.7 3e-16 >seq22333 Length=1412734 Score = 592 bits (656), Expect = 5e-165 Identities = 731/994 (74%), Gaps = 4/994 (0%) Strand=Plus/Plus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||||||| | ||| ||| | ||||| ||||| |||| |||||| Sbjct 733214 TGGGGTCGCTTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTT 733273 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398 ||||| ||||||| || | | | | || || | ||| |||||| |||| ||||| Sbjct 733274 GGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCAT 733332 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 |||||| ||||| ||||| ||||| || |||||||||||||| ||||| ||||| || || Sbjct 733333 TGCTGCTCCTCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTA 733392 Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518 ||| ||||| || || |||||||| | | |||| | || || || | ||||| Sbjct 733393 TGGAAACAATATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATCGGTTTGCATTT 733452 Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578 || |||| |||||||| || |||| |||||| | ||||||||||| |||||| | Sbjct 733453 TTACCCGATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGA 733512 Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638 ||| | || | |||||| | | ||| | | |||| |||| || || |||||||| Sbjct 733513 GCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACT 733572 Query 42639 TTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGC 42698 | | ||| || || ||| | || ||||| |||||| || || || ||||| || || Sbjct 733573 TAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGC 733632 Query 42699 AGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCC 42758 |||| |||| || ||| | |||| ||| | || ||||| |||||| ||||| ||||| Sbjct 733633 AGCGGCTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCC 733692 Query 42759 TCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCT 42818 ||| || || || ||||| |||||||||||| | || ||||||||||| || ||||| || Sbjct 733693 TCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCT 733752 Query 42819 TATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGC 42878 |||||| || ||||| ||| | || || || || ||||| || || || | ||| || Sbjct 733753 TATGCACCCATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGC 733812 Query 42879 TATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCA 42938 |||||||||| | || |||||| | | | | ||||| || ||||| ||| Sbjct 733813 TATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGC 733872 Query 42939 AAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGG 42998 ||| | || |||| |||||||||||||| || |||||||| || || || || || || Sbjct 733873 TAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGG 733932 Query 42999 TTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACT 43057 ||| ||||| || | |||||||||||||| | |||| || ||| ||| ||||| || | Sbjct 733933 TTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAATTCTCGTTCTTTACATT 733991 Query 43058 TCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTA 43117 |||| || || |||||||| || || || || ||||||||| || | || | || |||| Sbjct 733992 TCTTCCTGGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTA 734051 Query 43118 TGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATG 43177 |||| || ||| | |||||||| || || |||||||| | ||||||| ||| || || Sbjct 734052 TGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTG 734111 Query 43178 TCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACG 43237 | || ||| |||||||||||| | |||||||| |||||||| | || || ||||| | Sbjct 734112 TAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATG 734171 Query 43238 AGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 | || ||||| ||||||||||| || || || || Sbjct 734172 AACGTAATGCTCATAACTTCCCTCTAGACCTAGC 734205 Score = 253 bits (280), Expect = 6e-63 Identities = 317/431 (74%), Gaps = 3/431 (1%) Strand=Plus/Plus Query 42843 TGTT-GCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCT 42901 |||| || || ||||| || || || | ||| |||||||||||| | || |||| Sbjct 732398 TGTTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCT 732457 Query 42902 CTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTC 42961 || | | | | ||||| || ||||| || ||| | || |||| ||||||| Sbjct 732458 CTAATTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTC 732517 Query 42962 AAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCC 43021 ||||||| || |||||||| || || || || || ||||| ||||| || | ||||||| Sbjct 732518 AAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCC 732577 Query 43022 AATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTT 43080 ||||||| | |||| || ||| ||| ||||| || ||||| || || |||||||| || Sbjct 732578 AATATGC-TAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTA 732636 Query 43081 GTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTT 43140 || || || ||||||||| || | || | || |||||||| || ||| | |||||||| Sbjct 732637 GTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTC 732696 Query 43141 AACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATT 43200 || || |||||||| | ||||||| ||| || ||| || ||| |||||||||||| Sbjct 732697 AATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATT 732756 Query 43201 TTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCG 43260 | |||||||| |||||||| | || || ||||| || || ||||| ||||||||||| Sbjct 732757 ATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCT 732816 Query 43261 CTTGATCTTGC 43271 || || || || Sbjct 732817 CTAGACCTAGC 732827 >seq17466 Length=9900 Score = 354 bits (392), Expect = 2e-93 Identities = 424/573 (74%), Gaps = 2/573 (0%) Strand=Plus/Plus Query 42700 GCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCT 42759 || ||||| || ||| | | ||||| |||| ||||| ||| || ||||| |||||| Sbjct 9172 GCTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCT 9231 Query 42760 CTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTT 42819 | || || || ||||| |||||||| ||| | || |||||||| || || ||||| ||| Sbjct 9232 TTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTT 9291 Query 42820 ATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCT 42879 |||||||| || || ||| | ||||| || || ||||| || || || | ||| ||| Sbjct 9292 ATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCT 9351 Query 42880 ATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAA 42939 ||||||||| | || |||||| | | | | ||||| |||||||| || Sbjct 9352 ATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCT 9411 Query 42940 AATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGT 42999 ||| | || ||||| || |||||||| || ||||||||||||||||| || || || ||| Sbjct 9412 AATGAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGT 9471 Query 43000 TACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTT 43058 || ||||| || | |||||||||||||| | |||| || || ||| ||||| ||||| Sbjct 9472 TATTTTGGTCGATTAATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCTTTACACTT 9530 Query 43059 CTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTAT 43118 ||| | || |||||||| || || ||||| ||||||||| || | || | |||||||| Sbjct 9531 CTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTAT 9590 Query 43119 GGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGT 43178 ||| || ||| | ||||| || || || |||||||| | ||||||| ||| || || Sbjct 9591 GGCATTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGT 9650 Query 43179 CATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGA 43238 || ||||||||||||||| | || ||||| || ||||| | || || |||||||| Sbjct 9651 TATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGA 9710 Query 43239 GCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 || ||||| || |||||||| || || || || Sbjct 9711 ACGTAATGCTCACAACTTCCCTCTAGACCTAGC 9743 Score = 170 bits (188), Expect = 5e-38 Identities = 256/361 (71%), Gaps = 2/361 (1%) Strand=Plus/Plus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || || |||||| | ||| || | ||||||||||| | || ||||| Sbjct 8809 TGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTC 8868 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGTTTTATTGTCGCTTTCAT 42398 ||||| ||||||| |||| || | | | || || || |||||| |||| ||||| Sbjct 8869 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCAT 8927 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 ||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||| | || || Sbjct 8928 CGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTA 8987 Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518 ||| ||||| || || |||||||| | | |||| | || || ||| | ||||| Sbjct 8988 TGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTT 9047 Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578 || | || |||||||| | |||| |||||| | ||||||||||| |||||| | Sbjct 9048 TTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGA 9107 Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638 ||| | || | |||||| | | ||| | | ||| |||| || || |||||||| Sbjct 9108 GCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACT 9167 Query 42639 T 42639 | Sbjct 9168 T 9168 >seq14178 Length=3042336 Score = 170 bits (188), Expect = 5e-38 Identities = 280/399 (70%), Gaps = 16/399 (4%) Strand=Plus/Minus Query 42877 GCTATGCATGGTAGTCTTG--TCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAA 42934 |||||||||||| |||| | |||||| | | | | ||||| || |||| ||| Sbjct 2899483 GCTATGCATGGTTC-CTTGGTTAACCTCTAGTTTGATCAGGGAAACCACATAAAATGAAT 2899425 Query 42935 GCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGC 42994 ||| | || |||| |||||||||||||| || |||||||| || || || || Sbjct 2899424 CTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTT 2899365 Query 42995 ATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGT-TTAATAATAGTCGCTCTTTG 43053 | ||||| ||||| | | |||||||||||||| | || | || ||| ||| ||||| Sbjct 2899364 ACGGTTATTTTGGCTGATTGATCTTCCAATATGC-TAGTGTCAACAATTCTCGTTCTTTA 2899306 Query 43054 CACTTCTTTCTTGCCGCTT-GGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAG 43112 || ||||| || || |||| |||| || || || || ||||||||| || | || | || Sbjct 2899305 CATTTCTTCCTGGCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTAG 2899246 Query 43113 TACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAA 43172 ||||| || | ||| | |||||||| || || |||||||| |||| Sbjct 2899245 CACTATAGCTTGCAACCTAAATGGTTTCAATTTCAACCAATC----------TATCAAGG 2899196 Query 43173 TCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGAT 43232 || ||| || ||| |||||||||||| | |||||||| ||||| || || || || Sbjct 2899195 TCGTGTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTAT 2899136 Query 43233 GCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 ||| || || || | ||||||||||| || || || || Sbjct 2899135 GCATGAACGTAAAGGTCATAACTTCCCTCTAGACCTAGC 2899097 >seq23661 Length=1651130 Score = 98.7 bits (108), Expect = 3e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 42316 AACCGTCTTTATGTTGGGTGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACC 42375 ||||| ||||| |||| ||||||||||| ||||||| || | | | |||| || Sbjct 1465816 AACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACTGCAACT 1465757 Query 42376 ACCTGTTTTATTGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAA 42435 | ||||||| |||| ||||||||||| | ||| ||||| |||||||| ||| ||||| Sbjct 1465756 TCTGTTTTTATTATCGCCTTCATTGCTGCTCTTCCAGTAGATATTGATGGTATTTGTGAA 1465697 Query 42436 CCTGTCTCTGGCTC 42449 ||||| | ||| || Sbjct 1465696 CCTGTTTTTGGATC 1465683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143489166028800