Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_020874.1
Length=46198
Score E
Sequences producing significant alignments: (Bits) Value
seq22333 489 5e-134
seq17466 325 1e-84
seq14178 165 2e-36
>seq22333
Length=1412734
Score = 489 bits (542), Expect = 5e-134
Identities = 705/986 (72%), Gaps = 6/986 (1%)
Strand=Plus/Minus
Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936
|||| ||| || || ||||||||||||||||| || ||||||||||| | || ||||||
Sbjct 734205 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 734146
Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996
|| || || | | ||||||||| ||| |||| || | | ||| ||||| ||
Sbjct 734145 GCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 734086
Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056
||||| || || |||||||||||||| || ||||| |||| ||||| | || || | |
Sbjct 734085 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAAC 734026
Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116
|| || || || || ||||||| ||| || |||||||| | |||||| || || |||
Sbjct 734025 CAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAAA 733966
Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176
|| ||||| || || || |||| ||||| || ||||| ||||| || |||||||| ||
Sbjct 733965 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATAAGTT 733906
Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236
||||| ||||| || || | || || | ||| || | | ||||| |||||
Sbjct 733905 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 733846
Query 26237 ATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACC 26296
|| | || || ||||| || ||||||||| ||| || | || ||||| ||
Sbjct 733845 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 733786
Query 26297 CCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACG 26356
||||| || || ||| |||||||||||||| || || || || || || ||||||||
Sbjct 733785 CCAGCTACGCCTAACATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACA 733726
Query 26357 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGT 26416
| ||| ||||| |||||||||||||| || |||||||| |||||| |||||| |||||
Sbjct 733725 ATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGA 733666
Query 26417 CCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACA 26476
|||| || || | ||||| || || ||||| | | || |||| ||||||||||
Sbjct 733665 CCGATTGGGTAGATCAAGAAAACAGCAGCCGCTGCTGCAACAGGAGCTGAATATGCAACA 733606
Query 26477 AATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATATGCT 26536
||||| || | ||| || || | | || |||||||||| | || ||
Sbjct 733605 GCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAA 733546
Query 26537 GCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCAC 26596
||||| || | ||||||||| | | ||| || | ||| || ||||||||||||| |||
Sbjct 733545 GCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACCAT 733486
Query 26597 TCGTCCA-GTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGA 26655
|| || | | |||| |||||||| |||||||||||||| | ||||| || ||| |
Sbjct 733485 TCATCAACGGATGCC-GCTTCCCATATCGGGTAAAAATGCAAACCGATAGCTGCAGAAGT 733427
Query 26656 GGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTC 26715
|| | | || || || || ||||||||||| || | || || || ||||| || ||
Sbjct 733426 AGGAATAATCGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTC 733367
Query 26716 ACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGTAG 26774
||| || || || |||||||| || || || || |||||||| | ||||| ||| | ||
Sbjct 733366 ACGAATACCGTCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACA-GAAG 733308
Query 26775 TGGCTG-CGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTC 26833
| || | | | ||| |||| ||||| | || || ||||| || | || || |||||
Sbjct 733307 TTGCGGTCAATAAAGTAGGG-ATCATCAAAACACCAAACCAACCAATGTAAAGGCGGTTT 733249
Query 26834 TCAGTACTTGTAACCCACTCACAAAA 26859
||||| || || | ||| | ||| ||
Sbjct 733248 TCAGTGCTAGTTATCCAGTTACAGAA 733223
Score = 221 bits (244), Expect = 4e-53
Identities = 310/431 (72%), Gaps = 3/431 (1%)
Strand=Plus/Minus
Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936
|||| ||| || || ||||||||||||||||| || ||||||||||| | || ||||||
Sbjct 732827 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 732768
Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996
|| || || | | ||||||||| ||| |||| || | | ||| ||||| ||
Sbjct 732767 GCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 732708
Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056
||||| || || |||||||||||||| || ||||| |||| ||||| | || || | |
Sbjct 732707 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAAC 732648
Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116
|| || || || || ||||||| ||| || |||||||| | |||||| || || |||
Sbjct 732647 CAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAAA 732588
Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176
|| ||||| || || || |||| ||||| || ||||| ||||| || |||||||| ||
Sbjct 732587 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATAAGTT 732528
Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236
||||| ||||| || || | || || | ||| || | ||||| |||||
Sbjct 732527 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTTATTTTCTGTGGTTTCCCTG 732468
Query 26237 AT-AAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAAC 26295
|| || | | || || ||||| || ||||||||| ||| || | || ||||| ||
Sbjct 732467 ATCAAATTA-GAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATAC 732409
Query 26296 CCCAGC-AACA 26305
||||| ||||
Sbjct 732408 ACCAGCTAACA 732398
>seq17466
Length=9900
Score = 325 bits (360), Expect = 1e-84
Identities = 414/567 (73%), Gaps = 2/567 (0%)
Strand=Plus/Minus
Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936
|||| ||| || || ||||| ||||||||||| |||||||| ||||| | || || |||
Sbjct 9743 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 9684
Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAAC-ATCTACTACTGA 25995
|| ||||| | | ||||||||| ||| || || | | || || ||| ||||| ||
Sbjct 9683 GCACGGTTGATGATATCAGCCCAAGTAT-TAATAACGCGACCTTGACTATCAACTACAGA 9625
Query 25996 CTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAG 26055
||||| || || || ||||||||||| |||||||| || | ||||| | || || |
Sbjct 9624 TTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGAA 9565
Query 26056 CCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAA 26115
||| || || || || ||||||| ||| | ||||| || | |||||| ||| || ||
Sbjct 9564 CCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAA 9505
Query 26116 ACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGT 26175
||| ||||| || || ||||||| ||||| || ||||| ||||| ||||| ||||| ||
Sbjct 9504 ACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATAAGT 9445
Query 26176 CTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGC 26235
|||||| ||||| ||||| || || || | ||| || | | || || |||||
Sbjct 9444 CTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCCT 9385
Query 26236 AATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAAC 26295
|| | || || ||||| || ||||||||| ||| || | || ||||| ||
Sbjct 9384 GATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATAC 9325
Query 26296 CCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATAC 26355
||||| ||||| ||| || ||||| ||||| || || || || || || ||||||||
Sbjct 9324 ACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAATAC 9265
Query 26356 GAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTG 26415
| ||||||||| ||||||||||| || || | |||||| |||||| ||||| |||||
Sbjct 9264 AATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTG 9205
Query 26416 TCCGAAAGGATAAACTAAGAACACTGC 26442
|| | |||||||| ||||| || ||
Sbjct 9204 ACCAATAGGATAAATCAAGAAAACAGC 9178
Score = 179 bits (198), Expect = 1e-40
Identities = 228/314 (73%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 26537 GCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCAC 26596
||||| || | ||||||||| | | ||| || | ||| || ||||||||||||| |||
Sbjct 9140 GCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACCAT 9081
Query 26597 TCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAG 26656
|| || | | |||||||||| || ||||||||||| | |||||| || ||| |
Sbjct 9080 TCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAAGTA 9021
Query 26657 GGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCA 26716
|| | | || || || || ||||||||||| || | ||| || || ||||| ||||||
Sbjct 9020 GGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCA 8961
Query 26717 CGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAAACATGTAGTG 26776
|| || ||||| |||||||| || || || ||||||||||| | ||||| | |||
Sbjct 8960 CGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAAGTT 8901
Query 26777 GCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTCTCA 26836
|| | | |||| || ||||| | || ||||||||||| | || |||||||| ||
Sbjct 8900 GCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGTTTTCG 8841
Query 26837 GTACTTGTAACCCA 26850
|| || || | |||
Sbjct 8840 GTGCTAGTTATCCA 8827
>seq14178
Length=3042336
Score = 165 bits (182), Expect = 2e-36
Identities = 230/318 (72%), Gaps = 11/318 (3%)
Strand=Plus/Plus
Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936
|||| ||| || || ||||||||| | ||||| || ||||||||||| |||||||||
Sbjct 2899097 GCTAGGTCTAGAGGGAAGTTATGACCTTTACGTTCATGCATAACTTCCGTACCGAGGTTA 2899156
Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996
|| || || | | ||||||||| ||||||| || || | | | || ||
Sbjct 2899157 GCACGATTAATAATATCAGCCCA----GGTATTAA--TTACACGACCTTGA--TA--GAT 2899206
Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056
||||| || || |||||||||||||| | || || |||| ||||||| || || | |
Sbjct 2899207 TGGTTGAAATTGAAACCATTTAGGTTGCAAGCTATAGTGCTAATACCCAAAGCAGTGAAC 2899266
Query 26057 CATATGCCAACAACCGG-CCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAA 26115
|| || || || || || ||||| ||| || |||||||| | |||||| || || |
Sbjct 2899267 CAGATACCTACTACAGGCCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTTGAC 2899326
Query 26116 ACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGT 26175
||| ||||| || || || |||| ||||| || |||| ||||| || |||||||| ||
Sbjct 2899327 ACTAGCATATTGGAAGATCAATCAGCCAAAATAACCGTAAGCAGCTACGATATTATAAGT 2899386
Query 26176 CTCTTCATCTTGCCCAAA 26193
||||| ||||| || ||
Sbjct 2899387 TTCTTCCTCTTGACCGAA 2899404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147667095552000
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