Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq22333 531 1e-146 seq17466 349 1e-91 seq14178 147 6e-31 seq23661 80.6 8e-11 >seq22333 Length=1412734 Score = 531 bits (588), Expect = 1e-146 Identities = 718/992 (72%), Gaps = 10/992 (1%) Strand=Plus/Minus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| ||||||||| ||||| ||||| ||||| || ||||| ||||||||||| || Sbjct 734209 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 734150 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | |||| || ||||||||| ||| ||| || ||| | | || ||||| Sbjct 734149 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTAC 734090 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| || || |||||||| ||||| ||||||||||| ||||| | | || Sbjct 734089 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGT 734030 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTT 40768 | ||| || || | || || ||||| | || ||||| |||| | ||| |||||| Sbjct 734029 GAACCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTT 733970 Query 40769 GAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATA 40828 ||| ||||||||| || || | || ||||| |||||||| ||||||||||| ||||| Sbjct 733969 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATA 733910 Query 40829 AGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTC 40888 ||| || | || ||||| || | || || | || |||||| |||| ||||| || Sbjct 733909 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 733850 Query 40889 CCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACC 40945 || || | | |||| || ||||| || ||||||||| || | | || || Sbjct 733849 CCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAGCCGCC 733793 Query 40946 AAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTG 41005 || || || || ||||| | ||| |||||||||||||| || |||||||| || || || Sbjct 733792 GAATACACCAGCTACGCCTAACATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTG 733733 Query 41006 GAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGA 41065 ||| |||| |||||||||||| || ||| |||||||| ||||||||||||||| ||| Sbjct 733732 GAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACT 733673 Query 41066 ACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTA 41125 || ||||||| ||| || | ||||| ||||| ||||||| | ||||||| || Sbjct 733672 TCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGCCGCTGCTGCAACAGGAGCTGAATA 733613 Query 41126 TGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGC 41185 ||| ||| ||||| || | |||||| || | | | ||||||||||| | ||| Sbjct 733612 TGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCAT 733553 Query 41186 GTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTA 41245 ||| ||||| || | ||| ||||| | ||||| || | ||| || ||||| ||||| Sbjct 733552 GTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTA 733493 Query 41246 TAGCCACTCGTCCAGTG-TGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGT 41304 || ||| || || | | ||||| ||||||| || ||||| ||||| | ||||| || Sbjct 733492 TAACCATTCATCAACGGATGCCG-CTTCCCATATCGGGTAAAAATGCAAACCGATAGCTG 733434 Query 41305 TAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAA 41364 ||| | |||| | || ||||| ||||||||||| || || | || || || |||| Sbjct 733433 CAGAAGTAGGAATAATCGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAA 733374 Query 41365 CGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-A 41423 | || ||||| || || || |||||||| || || || || || |||||||| || || | Sbjct 733373 CAGGTTCACGAATACCGTCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATA 733314 Query 41424 CATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGG 41483 || | || || || | ||| | || ||||| | |||||||||||||| | ||| ||| Sbjct 733313 CA-GAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCAACCAATGTAAAGG 733255 Query 41484 CGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 ||||| || |||||||| | ||||||||| || Sbjct 733254 CGGTTTTCAGTGCTAGTTATCCAGTTACAGAA 733223 Score = 197 bits (218), Expect = 4e-46 Identities = 261/362 (72%), Gaps = 0/362 (0%) Strand=Plus/Minus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| ||||||||| ||||| ||||| ||||| || ||||| ||||||||||| || Sbjct 732831 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 732772 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | |||| || ||||||||| ||| ||| || ||| | | || ||||| Sbjct 732771 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTAC 732712 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| || || |||||||| ||||| ||||||||||| ||||| | | || Sbjct 732711 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGT 732652 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTT 40768 | ||| || || | || || ||||| | || ||||| |||| | ||| |||||| Sbjct 732651 GAACCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTT 732592 Query 40769 GAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATA 40828 ||| ||||||||| || || | || ||||| |||||||| ||||||||||| ||||| Sbjct 732591 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATA 732532 Query 40829 AGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTC 40888 ||| || | || ||||| || | || || | || |||| | |||| ||||| || Sbjct 732531 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTTATTTTCTGTGGTTTC 732472 Query 40889 CC 40890 || Sbjct 732471 CC 732470 >seq17466 Length=9900 Score = 349 bits (386), Expect = 1e-91 Identities = 425/574 (74%), Gaps = 8/574 (1%) Strand=Plus/Minus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||| || Sbjct 9747 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 9688 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | | ||| | | ||||||||||||| ||| || ||| | | || ||||| Sbjct 9687 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 9628 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| || || || ||||| ||||| || ||||||||| ||||| | | || Sbjct 9627 AGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 9568 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCTATTGT 40767 | ||| || || | || || ||||| ||||||| |||||||| | ||| |||| Sbjct 9567 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAA-GAAGTGTAAAGAACGAGAGTTGT 9509 Query 40768 TGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTAT 40827 |||| ||||||||| || |||| || |||||| |||||||| ||||| || ||||||| Sbjct 9508 TGAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTAT 9449 Query 40828 AAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCT 40887 ||||||| |||| |||||||| || || || | || || ||| |||| ||||| | Sbjct 9448 AAGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTT 9389 Query 40888 CCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCAC 40944 ||| || | | |||| || ||||| || ||||||||| || | | ||| | Sbjct 9388 CCCTGATCAAACTAGAGG--TTACCAAGG-AACCATGCATAGCACTGAATAGGGAACCGC 9332 Query 40945 CAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTT 41004 | || || || || || || | ||| || ||||| ||||| || |||||||| || || | Sbjct 9331 CGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCT 9272 Query 41005 GGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAG 41064 |||| |||| ||| |||||||| || ||| ||||||||||||||||||||||||||| Sbjct 9271 GGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAAC 9212 Query 41065 AACCCTGACCGAATGGATAAACTAAGAATACAGC 41098 || ||||| | ||||||| ||||| ||||| Sbjct 9211 TTCCTTGACCAATAGGATAAATCAAGAAAACAGC 9178 Score = 201 bits (222), Expect = 3e-47 Identities = 255/351 (73%), Gaps = 0/351 (0%) Strand=Plus/Minus Query 41165 AAGTTCCCACTGTCTACCAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAG 41224 ||||||||||| | ||| || ||||| || | ||| ||||| | ||||| || Sbjct 9168 AAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAG 9109 Query 41225 TTGATATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTA 41284 | ||| || ||||| ||||||| ||| || || | | | |||||||| |||||||| Sbjct 9108 CTCATAAGGACCGCCATTGTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTA 9049 Query 41285 GAAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCC 41344 ||||| | |||||| || ||| | |||| | ||| ||||| ||||||||||| || Sbjct 9048 AAAATGCAATCCGATCGCCGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCC 8989 Query 41345 GTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGC 41404 || | ||| || || ||||| |||||||| || ||||| |||||||| || || || || Sbjct 8988 ATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGC 8929 Query 41405 GATAAAGGCGATTATGAAACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACC 41464 ||| |||||||| || || | || || || | ||| | || ||||| | ||||| Sbjct 8928 GATGAAGGCGATAATAAATACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACC 8869 Query 41465 AAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 ||||| || | ||| || ||||| ||||||||||| | |||||| || || Sbjct 8868 GAACCATCCGATGTAAAGACGGTTTTCGGTGCTAGTTATCCAGTTGCAGAA 8818 >seq14178 Length=3042336 Score = 147 bits (162), Expect = 6e-31 Identities = 251/363 (69%), Gaps = 11/363 (3%) Strand=Plus/Plus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| ||||||||| ||||| ||| | ||||| || ||||| |||||| |||| || Sbjct 2899093 AGCAGCTAGGTCTAGAGGGAAGTTATGACCTTTACGTTCATGCATAACTTCCGTACCGAG 2899152 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | |||| || ||||||||| ||| ||| || ||| | | || Sbjct 2899153 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGA--------TA- 2899203 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| || || |||||||| ||||| |||| ||||| ||||||| | || Sbjct 2899204 -GATTGGTTGAAATTGAAACCATTTAGGTTGCAAGCTATAGTGCTAATACCCAAAGCAGT 2899262 Query 40709 AAGCCATATGCCAATAACCGGGA-AAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGT 40767 | ||| || || | || || ||||| | || ||||| |||| | ||| ||||| Sbjct 2899263 GAACCAGATACCTACTACAGGCCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGT 2899322 Query 40768 TGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTAT 40827 ||| ||||||||| || || | || ||||| ||||||| ||||||||||| |||| Sbjct 2899323 TGACACTAGCATATTGGAAGATCAATCAGCCAAAATAACCGTAAGCAGCTACGATATTAT 2899382 Query 40828 AAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCT 40887 |||| || | || ||||| || | || || | || |||||| ||| ||||| | Sbjct 2899383 AAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTATGTGGTTT 2899442 Query 40888 CCC 40890 ||| Sbjct 2899443 CCC 2899445 >seq23661 Length=1651130 Score = 80.6 bits (88), Expect = 8e-11 Identities = 94/127 (74%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 41362 AAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGA 41421 |||| || |||| || ||||| |||||||| || | || || || |||||||| || | Sbjct 1465690 AAACAGGTTCACAAATACCATCAATATCTACTGGAAGAGCAGCAATGAAGGCGATAATAA 1465749 Query 41422 AACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATA 41481 || | || ||||| | ||| | || ||||| | |||||||||||||| | ||| | Sbjct 1465750 AAACAGAAGTTGCAGTCAATAAAGTAGGGATCATCAAAACACCAAACCAACCAATGTAAA 1465809 Query 41482 GGCGGTT 41488 ||||||| Sbjct 1465810 GGCGGTT 1465816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143658714470400