Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_021071.1
Length=177211
Score E
Sequences producing significant alignments: (Bits) Value
seq22333 596 2e-165
seq17466 443 2e-119
seq14178 194 2e-44
seq3005 82.4 9e-11
>seq22333
Length=1412734
Score = 596 bits (660), Expect = 2e-165
Identities = 713/967 (74%), Gaps = 6/967 (1%)
Strand=Plus/Minus
Query 67358 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAG 67417
|||||| ||||| ||||||||||| ||||| ||||| || |||||||||||||| |||||
Sbjct 734209 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 734150
Query 67418 TCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAAC 67474
|| | |||| || || ||||| ||| ||| || || |||| |||||
Sbjct 734149 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTAC---ACGACCTTGACTATCAAC 734093
Query 67475 GACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGC 67534
|| ||||||||||| |||||||| || |||||||| |||||||| | ||| | ||
Sbjct 734092 TACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGC 734033
Query 67535 AGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTT 67594
|||||||||||| | || ||||| | ||||| |||||||| || | | | || ||
Sbjct 734032 AGTGAACCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATT 733973
Query 67595 GTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTT 67654
||||||| ||||| ||||||||||| || || || || || |||||||| || || ||
Sbjct 733972 GTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATT 733913
Query 67655 GTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGT 67714
||||| ||||| ||||| ||||| ||||||| | || || || | || || ||
Sbjct 733912 ATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGT 733853
Query 67715 TTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACC 67774
||| ||||| | | ||| || || | ||||| ||||||||||| || || || || ||
Sbjct 733852 TTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCC 733793
Query 67775 GAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTG 67834
||||||||| ||||| || | ||| ||||||||||||||||||||||||||||| || ||
Sbjct 733792 GAATACACCAGCTACGCCTAACATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTG 733733
Query 67835 GAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGA 67894
||| || | |||| |||| ||||||||||| || || |||||||| | ||||| |||
Sbjct 733732 GAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACT 733673
Query 67895 ACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTA 67954
|||||||||| || |||| |||||| ||||| ||||| | || ||||| || ||
Sbjct 733672 TCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGCCGCTGCTGCAACAGGAGCTGAATA 733613
Query 67955 TGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACA 68014
||| ||| ||||||||||||||||| |||||| || ||||||||||| ||||||
Sbjct 733612 TGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCAT 733553
Query 68015 GTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATA 68074
||| | | || | | |||||| | || | || | |||| || ||||| ||
Sbjct 733552 GTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTA 733493
Query 68075 CAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTT 68134
||||| ||||| | | ||| |||||||| || || || || || | |||||| ||
Sbjct 733492 TAACCATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAATGCAAACCGATAGCTGC 733433
Query 68135 TGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAAC 68194
||| |||||| || ||||||||||| || ||||| || || | || || || | |||
Sbjct 733432 AGAAGTAGGAATAATCGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAAC 733373
Query 68195 AGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCA 68254
|||||| | ||||| || ||||| |||||||| || |||||||| || || || ||
Sbjct 733372 AGGTTCACGAATACCGTCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATAC 733313
Query 68255 AGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCG 68314
|| | ||| | | || ||| |||||||| ||||| |||||||||| || | |||
Sbjct 733312 AGAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCAACCAATGTAAAGGCG 733253
Query 68315 ATTGTCA 68321
|| |||
Sbjct 733252 GTTTTCA 733246
Score = 269 bits (298), Expect = 3e-67
Identities = 321/434 (74%), Gaps = 6/434 (1%)
Strand=Plus/Minus
Query 67358 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAG 67417
|||||| ||||| ||||||||||| ||||| ||||| || |||||||||||||| |||||
Sbjct 732831 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 732772
Query 67418 TCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAAC 67474
|| | |||| || || ||||| ||| ||| || || |||| |||||
Sbjct 732771 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTAC---ACGACCTTGACTATCAAC 732715
Query 67475 GACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGC 67534
|| ||||||||||| |||||||| || |||||||| |||||||| | ||| | ||
Sbjct 732714 TACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGC 732655
Query 67535 AGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTT 67594
|||||||||||| | || ||||| | ||||| |||||||| || | | | || ||
Sbjct 732654 AGTGAACCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATT 732595
Query 67595 GTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTT 67654
||||||| ||||| ||||||||||| || || || || || |||||||| || || ||
Sbjct 732594 GTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATT 732535
Query 67655 GTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGT 67714
||||| ||||| ||||| ||||| ||||||| | || || | | || || ||
Sbjct 732534 ATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTTATTTTCTGTGGT 732475
Query 67715 TTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACC 67774
||| ||||| | | ||| || || | ||||| ||||||||||| || || || || ||
Sbjct 732474 TTCCCTGATCAAATTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCC 732415
Query 67775 GAATACACCTGCTA 67788
||||||||| ||||
Sbjct 732414 GAATACACCAGCTA 732401
>seq17466
Length=9900
Score = 443 bits (490), Expect = 2e-119
Identities = 440/570 (77%), Gaps = 0/570 (0%)
Strand=Plus/Minus
Query 67358 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAG 67417
|||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||| |||||
Sbjct 9747 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 9688
Query 67418 TCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGAC 67477
|| | ||| | ||| || ||||||||| ||| || ||| ||||| ||
Sbjct 9687 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 9628
Query 67478 GGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGT 67537
||||||||||| ||||| || || ||||||||||||||||| | ||| | |||||
Sbjct 9627 AGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 9568
Query 67538 GAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTT 67597
||||||||| | || ||||| | ||||| | ||||||||| | | | ||||||||
Sbjct 9567 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 9508
Query 67598 GAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTA 67657
|||| ||||| |||||||| || ||||| || || || |||||||| |||||||| ||
Sbjct 9507 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATA 9448
Query 67658 AGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTC 67717
||||||||||||||| || || |||||||| | || ||||| | ||||| |||||
Sbjct 9447 AGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTC 9388
Query 67718 TCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAA 67777
||||| | | ||| || || | ||||| ||||||||||| || || ||||| |||||
Sbjct 9387 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 9328
Query 67778 TACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAA 67837
|||||| ||||| || | ||| || ||||| |||||||||||||||||||| || |||||
Sbjct 9327 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAA 9268
Query 67838 CACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACC 67897
|| | ||| |||| ||||||||||| || || | |||||| | ||||||||| ||
Sbjct 9267 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 9208
Query 67898 TTGACCGAAAGGATAGACCAAGAACACAGC 67927
|||||| | |||||| | |||||| |||||
Sbjct 9207 TTGACCAATAGGATAAATCAAGAAAACAGC 9178
Score = 145 bits (160), Expect = 9e-30
Identities = 181/247 (73%), Gaps = 6/247 (2%)
Strand=Plus/Minus
Query 68059 AAGGTCCACCATTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGT 68118
|||| || ||||| || ||||| ||||| | || ||| |||||||| || || || || |
Sbjct 9103 AAGGACCGCCATTGTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAAT 9044
Query 68119 GAAGACCGATTGCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACA 68178
| | ||||| || ||| |||||| || |||||||||||| || ||||| || || |
Sbjct 9043 GCAATCCGATCGCCGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAA 8984
Query 68179 TGAGCGAACCTGCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGA 68238
| ||||| | |||||| || | |||||||| ||||| |||||||| || || ||||
Sbjct 8983 GTAAAGAACCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGA 8924
Query 68239 ATGCAATGATGAA---GCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGA 68295
| || || || || | ||||||| | | ||| ||| |||||||| |||||||
Sbjct 8923 AGGCGATAATAAATACGGAAGTTGCGGTC---AATAAGGTAGGGATCATCAAAACACCGA 8867
Query 68296 ACCAACC 68302
|||| ||
Sbjct 8866 ACCATCC 8860
>seq14178
Length=3042336
Score = 194 bits (214), Expect = 2e-44
Identities = 287/404 (71%), Gaps = 12/404 (3%)
Strand=Plus/Plus
Query 67358 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAG 67417
|||||| ||||| ||||||||||| ||| | ||||| || |||||||||||| | || ||
Sbjct 2899093 AGCAGCTAGGTCTAGAGGGAAGTTATGACCTTTACGTTCATGCATAACTTCCGTACCGAG 2899152
Query 67418 TCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGAC 67477
|| | |||| || || ||||| ||| ||| || || |||| ||
Sbjct 2899153 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTAC---ACGACCTT-------GAT 2899202
Query 67478 GGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGT 67537
||||||||||| |||||||| || |||||| | || ||||| | ||||| |||||
Sbjct 2899203 AGATTGGTTGAAATTGAAACCATTTAGGTTGCAAGCTATAGTGCTAATACCCAAAGCAGT 2899262
Query 67538 GAACCAGATGCAGACCACAGGGA-ATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGT 67596
||||||||| | || ||||| | ||||| |||||||| || | | | || ||||
Sbjct 2899263 GAACCAGATACCTACTACAGGCCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGT 2899322
Query 67597 TGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGT 67656
||| | ||||| ||||||||||| | || || || || | |||||| || || || |
Sbjct 2899323 TGACACTAGCATATTGGAAGATCAATCAGCCAAAATAACCGTAAGCAGCTACGATATTAT 2899382
Query 67657 AAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTT 67716
|||| ||||| ||||| ||||| ||||||| | || || || | | || ||||
Sbjct 2899383 AAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTATGTGGTTT 2899442
Query 67717 CTCTGATAAGAGAAGAAG-TAACAAGAGAACCGTGCATAGCACT 67759
| ||||| | | ||| | |||| | ||||| |||||||||||
Sbjct 2899443 CCCTGATCAAACTAGAGGTTAACCAAGGAACCATGCATAGCACT 2899486
>seq3005
Length=2476929
Score = 82.4 bits (90), Expect = 9e-11
Identities = 189/284 (67%), Gaps = 18/284 (6%)
Strand=Plus/Plus
Query 67590 GAGTTGTTGAAAGATGCATACTGGAAG-ATCAAGCGACCGAAGTATCCATGAGCAGCAAC 67648
|| ||| ||||| ||||| |||| ||||| | || || || |||||||||| ||
Sbjct 2014042 GAATTGCTGAAACCAGCATATCAGAAGTATCAATCAGCCAAAATAAACATGAGCAGCTAC 2014101
Query 67649 AATGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTC 67708
||| | ||||| ||||| ||| | || || |||| | | || | || || | ||
Sbjct 2014102 AATATCTTAAGTTTCTTCCTCTGGACCAAATCTGTATCTTTCCTTGGGAGATTCATTTTC 2014161
Query 67709 AGTAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGA 67768
|| ||||| | ||| | | ||| || || | |||||||||| || ||
Sbjct 2014162 TGTGGTTTCCCGGATCAAACTAGAGGTTACCAAGTAACCGTGCAT----------AGGGA 2014211
Query 67769 ACCACCGAATACACCTGCTACTCC--AAGCATA-----TGGAATGGGTGCATAAGGATGT 67821
||| || || ||||| |||| || | |||| ||||||| |||| |||||||
Sbjct 2014212 ACCGCCAAACACACCAGCTAAGCCTTAGTCATAAAATGTGGAATGAATGCACAAGGATGC 2014271
Query 67822 TGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTACCAGAA 67865
||||||| || |||| || || |||| |||||||| |||
Sbjct 2014272 TGTGCTCGGCCCGGAATACAGTAGTGAAGTTGAAAGTACCGGAA 2014315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 566765776896000
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