Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq22333 596 2e-165 seq17466 443 2e-119 seq14178 194 2e-44 seq3005 82.4 9e-11 >seq22333 Length=1412734 Score = 596 bits (660), Expect = 2e-165 Identities = 713/967 (74%), Gaps = 6/967 (1%) Strand=Plus/Minus Query 67358 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAG 67417 |||||| ||||| ||||||||||| ||||| ||||| || |||||||||||||| ||||| Sbjct 734209 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 734150 Query 67418 TCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAAC 67474 || | |||| || || ||||| ||| ||| || || |||| ||||| Sbjct 734149 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTAC---ACGACCTTGACTATCAAC 734093 Query 67475 GACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGC 67534 || ||||||||||| |||||||| || |||||||| |||||||| | ||| | || Sbjct 734092 TACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGC 734033 Query 67535 AGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTT 67594 |||||||||||| | || ||||| | ||||| |||||||| || | | | || || Sbjct 734032 AGTGAACCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATT 733973 Query 67595 GTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTT 67654 ||||||| ||||| ||||||||||| || || || || || |||||||| || || || Sbjct 733972 GTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATT 733913 Query 67655 GTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGT 67714 ||||| ||||| ||||| ||||| ||||||| | || || || | || || || Sbjct 733912 ATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGT 733853 Query 67715 TTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACC 67774 ||| ||||| | | ||| || || | ||||| ||||||||||| || || || || || Sbjct 733852 TTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCC 733793 Query 67775 GAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTG 67834 ||||||||| ||||| || | ||| ||||||||||||||||||||||||||||| || || Sbjct 733792 GAATACACCAGCTACGCCTAACATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTG 733733 Query 67835 GAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGA 67894 ||| || | |||| |||| ||||||||||| || || |||||||| | ||||| ||| Sbjct 733732 GAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACT 733673 Query 67895 ACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTA 67954 |||||||||| || |||| |||||| ||||| ||||| | || ||||| || || Sbjct 733672 TCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGCCGCTGCTGCAACAGGAGCTGAATA 733613 Query 67955 TGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACA 68014 ||| ||| ||||||||||||||||| |||||| || ||||||||||| |||||| Sbjct 733612 TGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCAT 733553 Query 68015 GTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATA 68074 ||| | | || | | |||||| | || | || | |||| || ||||| || Sbjct 733552 GTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTA 733493 Query 68075 CAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTT 68134 ||||| ||||| | | ||| |||||||| || || || || || | |||||| || Sbjct 733492 TAACCATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAATGCAAACCGATAGCTGC 733433 Query 68135 TGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAAC 68194 ||| |||||| || ||||||||||| || ||||| || || | || || || | ||| Sbjct 733432 AGAAGTAGGAATAATCGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAAC 733373 Query 68195 AGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCA 68254 |||||| | ||||| || ||||| |||||||| || |||||||| || || || || Sbjct 733372 AGGTTCACGAATACCGTCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATAC 733313 Query 68255 AGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCG 68314 || | ||| | | || ||| |||||||| ||||| |||||||||| || | ||| Sbjct 733312 AGAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCAACCAATGTAAAGGCG 733253 Query 68315 ATTGTCA 68321 || ||| Sbjct 733252 GTTTTCA 733246 Score = 269 bits (298), Expect = 3e-67 Identities = 321/434 (74%), Gaps = 6/434 (1%) Strand=Plus/Minus Query 67358 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAG 67417 |||||| ||||| ||||||||||| ||||| ||||| || |||||||||||||| ||||| Sbjct 732831 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 732772 Query 67418 TCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAAC 67474 || | |||| || || ||||| ||| ||| || || |||| ||||| Sbjct 732771 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTAC---ACGACCTTGACTATCAAC 732715 Query 67475 GACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGC 67534 || ||||||||||| |||||||| || |||||||| |||||||| | ||| | || Sbjct 732714 TACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGC 732655 Query 67535 AGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTT 67594 |||||||||||| | || ||||| | ||||| |||||||| || | | | || || Sbjct 732654 AGTGAACCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATT 732595 Query 67595 GTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTT 67654 ||||||| ||||| ||||||||||| || || || || || |||||||| || || || Sbjct 732594 GTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATT 732535 Query 67655 GTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGT 67714 ||||| ||||| ||||| ||||| ||||||| | || || | | || || || Sbjct 732534 ATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTTATTTTCTGTGGT 732475 Query 67715 TTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACC 67774 ||| ||||| | | ||| || || | ||||| ||||||||||| || || || || || Sbjct 732474 TTCCCTGATCAAATTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCC 732415 Query 67775 GAATACACCTGCTA 67788 ||||||||| |||| Sbjct 732414 GAATACACCAGCTA 732401 >seq17466 Length=9900 Score = 443 bits (490), Expect = 2e-119 Identities = 440/570 (77%), Gaps = 0/570 (0%) Strand=Plus/Minus Query 67358 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAG 67417 |||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct 9747 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 9688 Query 67418 TCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGAC 67477 || | ||| | ||| || ||||||||| ||| || ||| ||||| || Sbjct 9687 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 9628 Query 67478 GGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGT 67537 ||||||||||| ||||| || || ||||||||||||||||| | ||| | ||||| Sbjct 9627 AGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 9568 Query 67538 GAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTT 67597 ||||||||| | || ||||| | ||||| | ||||||||| | | | |||||||| Sbjct 9567 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 9508 Query 67598 GAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTA 67657 |||| ||||| |||||||| || ||||| || || || |||||||| |||||||| || Sbjct 9507 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATA 9448 Query 67658 AGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTC 67717 ||||||||||||||| || || |||||||| | || ||||| | ||||| ||||| Sbjct 9447 AGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTC 9388 Query 67718 TCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAA 67777 ||||| | | ||| || || | ||||| ||||||||||| || || ||||| ||||| Sbjct 9387 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 9328 Query 67778 TACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAA 67837 |||||| ||||| || | ||| || ||||| |||||||||||||||||||| || ||||| Sbjct 9327 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAA 9268 Query 67838 CACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACC 67897 || | ||| |||| ||||||||||| || || | |||||| | ||||||||| || Sbjct 9267 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 9208 Query 67898 TTGACCGAAAGGATAGACCAAGAACACAGC 67927 |||||| | |||||| | |||||| ||||| Sbjct 9207 TTGACCAATAGGATAAATCAAGAAAACAGC 9178 Score = 145 bits (160), Expect = 9e-30 Identities = 181/247 (73%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 68059 AAGGTCCACCATTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGT 68118 |||| || ||||| || ||||| ||||| | || ||| |||||||| || || || || | Sbjct 9103 AAGGACCGCCATTGTATAACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAAT 9044 Query 68119 GAAGACCGATTGCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACA 68178 | | ||||| || ||| |||||| || |||||||||||| || ||||| || || | Sbjct 9043 GCAATCCGATCGCCGCAGAAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAA 8984 Query 68179 TGAGCGAACCTGCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGA 68238 | ||||| | |||||| || | |||||||| ||||| |||||||| || || |||| Sbjct 8983 GTAAAGAACCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGA 8924 Query 68239 ATGCAATGATGAA---GCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGA 68295 | || || || || | ||||||| | | ||| ||| |||||||| ||||||| Sbjct 8923 AGGCGATAATAAATACGGAAGTTGCGGTC---AATAAGGTAGGGATCATCAAAACACCGA 8867 Query 68296 ACCAACC 68302 |||| || Sbjct 8866 ACCATCC 8860 >seq14178 Length=3042336 Score = 194 bits (214), Expect = 2e-44 Identities = 287/404 (71%), Gaps = 12/404 (3%) Strand=Plus/Plus Query 67358 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAG 67417 |||||| ||||| ||||||||||| ||| | ||||| || |||||||||||| | || || Sbjct 2899093 AGCAGCTAGGTCTAGAGGGAAGTTATGACCTTTACGTTCATGCATAACTTCCGTACCGAG 2899152 Query 67418 TCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGAC 67477 || | |||| || || ||||| ||| ||| || || |||| || Sbjct 2899153 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTAC---ACGACCTT-------GAT 2899202 Query 67478 GGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGT 67537 ||||||||||| |||||||| || |||||| | || ||||| | ||||| ||||| Sbjct 2899203 AGATTGGTTGAAATTGAAACCATTTAGGTTGCAAGCTATAGTGCTAATACCCAAAGCAGT 2899262 Query 67538 GAACCAGATGCAGACCACAGGGA-ATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGT 67596 ||||||||| | || ||||| | ||||| |||||||| || | | | || |||| Sbjct 2899263 GAACCAGATACCTACTACAGGCCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGT 2899322 Query 67597 TGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGT 67656 ||| | ||||| ||||||||||| | || || || || | |||||| || || || | Sbjct 2899323 TGACACTAGCATATTGGAAGATCAATCAGCCAAAATAACCGTAAGCAGCTACGATATTAT 2899382 Query 67657 AAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTT 67716 |||| ||||| ||||| ||||| ||||||| | || || || | | || |||| Sbjct 2899383 AAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTATGTGGTTT 2899442 Query 67717 CTCTGATAAGAGAAGAAG-TAACAAGAGAACCGTGCATAGCACT 67759 | ||||| | | ||| | |||| | ||||| ||||||||||| Sbjct 2899443 CCCTGATCAAACTAGAGGTTAACCAAGGAACCATGCATAGCACT 2899486 >seq3005 Length=2476929 Score = 82.4 bits (90), Expect = 9e-11 Identities = 189/284 (67%), Gaps = 18/284 (6%) Strand=Plus/Plus Query 67590 GAGTTGTTGAAAGATGCATACTGGAAG-ATCAAGCGACCGAAGTATCCATGAGCAGCAAC 67648 || ||| ||||| ||||| |||| ||||| | || || || |||||||||| || Sbjct 2014042 GAATTGCTGAAACCAGCATATCAGAAGTATCAATCAGCCAAAATAAACATGAGCAGCTAC 2014101 Query 67649 AATGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTC 67708 ||| | ||||| ||||| ||| | || || |||| | | || | || || | || Sbjct 2014102 AATATCTTAAGTTTCTTCCTCTGGACCAAATCTGTATCTTTCCTTGGGAGATTCATTTTC 2014161 Query 67709 AGTAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGA 67768 || ||||| | ||| | | ||| || || | |||||||||| || || Sbjct 2014162 TGTGGTTTCCCGGATCAAACTAGAGGTTACCAAGTAACCGTGCAT----------AGGGA 2014211 Query 67769 ACCACCGAATACACCTGCTACTCC--AAGCATA-----TGGAATGGGTGCATAAGGATGT 67821 ||| || || ||||| |||| || | |||| ||||||| |||| ||||||| Sbjct 2014212 ACCGCCAAACACACCAGCTAAGCCTTAGTCATAAAATGTGGAATGAATGCACAAGGATGC 2014271 Query 67822 TGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTACCAGAA 67865 ||||||| || |||| || || |||| |||||||| ||| Sbjct 2014272 TGTGCTCGGCCCGGAATACAGTAGTGAAGTTGAAAGTACCGGAA 2014315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566765776896000