Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq5785 122 2e-22
seq4300 118 2e-21
seq3274 96.9 6e-15
>seq5785
Length=266748
Score = 122 bits (134), Expect = 2e-22
Identities = 169/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | | ||||| |||| || | |||| || || ||| ||
Sbjct 166292 ATTTGCATACCACCACGAAGACGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTG 166351
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| | | || | | ||| |||| || ||||| |||||||| | |||||| ||
Sbjct 166352 TAGTCAGCAAGGGTACGACCATCTTCTAGCTGCTTTCCAGCAAAAATCAGTCTCTGCTGG 166411
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
||||| || || || || ||||| || ||||| | || | ||| ||| ||||| |||
Sbjct 166412 TCAGGTGGGATGCCCTCCTTATCCTGAATTTTAGCCTTGACATTGTCAATTGTATCAGAA 166471
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||||||| | || ||||||||||| || || ||||| ||||| || ||||||
Sbjct 166472 CTCTCAACTTCCAAGGTGATAGTTTTACCAGTGAGAGTTTTCACAAAGATCTGCATT 166528
Score = 122 bits (134), Expect = 2e-22
Identities = 169/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | | ||||| |||| || | |||| || || ||| ||
Sbjct 167565 ATTTGCATACCACCACGAAGACGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTG 167624
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| | | || | | ||| |||| || ||||| |||||||| | |||||| ||
Sbjct 167625 TAGTCAGCAAGGGTACGACCATCTTCTAGCTGCTTTCCAGCAAAAATCAGTCTCTGCTGG 167684
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
||||| || || || || ||||| || ||||| | || | ||| ||| ||||| |||
Sbjct 167685 TCAGGTGGGATGCCCTCCTTATCCTGAATTTTAGCCTTGACATTGTCAATTGTATCAGAA 167744
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||||||| | || ||||||||||| || || ||||| ||||| || ||||||
Sbjct 167745 CTCTCAACTTCCAAGGTGATAGTTTTACCAGTGAGAGTTTTCACAAAGATCTGCATT 167801
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | ||||| |||| || | || | ||| || ||| || ||||||
Sbjct 167343 ATACCACCACGAAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCG 167402
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | ||| |||| || || || ||||| || | ||||| || |||||
Sbjct 167403 GCAAGGGTACGACCATCTTCTAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGC 167462
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | ||| | ||| ||||||||| ||| ||||
Sbjct 167463 GGGATGCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATAGTATCCGAACTCTCA 167522
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||||| || || || || || || || || || ||||| ||||||||
Sbjct 167523 ACTTCTAAGGTAATGGTCTTGCCAGTAAGAGTCTTAACAAAGATTTGCAT 167572
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | || || |||| || | || | ||| || || || |||||
Sbjct 171449 ATACCACCACGGAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGTATGTTGTAGTCA 171508
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || |||| ||| || | |||||| || ||||| || |||||||| |||||||||
Sbjct 171509 GCTAGAGTTCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGATCAGGA 171568
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || || || || | || | ||| ||| || || || |||
Sbjct 171569 GGGATGCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCAATTGTGTCAGAGCTTTCA 171628
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | ||||||||||||||| || || ||||| ||||| || |||||
Sbjct 171629 ACCTCCAAAGTTATAGTTTTACCGGTAAGGGTTTTCACAAAAATCTGCAT 171678
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | ||||| |||| ||| | || | ||| || || || |||||
Sbjct 242885 ATACCACCACGGAGACGAAGCACCAAATGGAGGGTTGACTCCTTCTGTATGTTGTAGTCA 242944
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | ||| || | |||||| |||||||| ||||| ||||||||||||||
Sbjct 242945 GCAAGAGTACGACCATCTTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGT 243004
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||| || || || || || || | || | ||| || || || || |||
Sbjct 243005 GGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATTGTGTCAGAGCTTTCA 243064
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | ||||||||| ||||| || || ||||| ||||| || |||||
Sbjct 243065 ACCTCCAAAGTTATAGTCTTACCGGTCAGGGTTTTCACAAAAATCTGCAT 243114
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| || | |||||| |||| || | || | || || |||||||||||
Sbjct 243569 ATACCACCCCTGAGTCGAAGGACCAAGTGGAGCGTTGATTCCTTCTGGATATTATAGTCA 243628
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | ||| || | ||||| || ||||| || | ||||| ||||| ||
Sbjct 243629 GCAAGTGTGCGACCATCCTCGAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGT 243688
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || || || |||| ||||| ||| ||| || ||||| |||
Sbjct 243689 GGGATCCCTTCCTTGTCCTGGATCTTGGCTTTTACATTATCAATGGTGTCGGAGCTTTCA 243748
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || ||||| || || || || || ||||| ||||| ||||||||
Sbjct 243749 ACCTCAAGGGTTATTGTCTTGCCGGTGAGAGTTTTCACAAAGATTTGCAT 243798
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | ||||| |||| || | || | ||| || ||| || |||||
Sbjct 166070 ATACCACCACGAAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCA 166129
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | ||| |||| || || || ||||| || | ||||| || |||||
Sbjct 166130 GCAAGGGTACGACCATCTTCTAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGC 166189
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | ||| | ||| ||||||||| ||| ||||
Sbjct 166190 GGGATGCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATAGTATCCGAACTCTCA 166249
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||||| || || || || || || || || || ||||| ||||||||
Sbjct 166250 ACTTCTAAGGTAATGGTCTTGCCAGTAAGAGTCTTAACAAAGATTTGCAT 166299
>seq4300
Length=903212
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| ||||| || || | || | |||||| ||||||||||| | ||||| |
Sbjct 818378 CGGAGTACAAGGTGAAGAGTTGACTCTTTCTGGATATTATAGTCAGCCAACGTACGGCCG 818319
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || ||||| || |||||||| || ||||| |||||||| || || || || || ||
Sbjct 818318 TCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGCGGGATCCCCTCCTTG 818259
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| || |||| ||| | ||| ||| ||||| ||| ||| || || ||||| ||
Sbjct 818258 TCTTGGATCTTGGCTTTGACATTATCAATCGTATCTGAACTCTCCACCTCGAGAGTGATC 818199
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || ||||| ||||| || || || |||||
Sbjct 818198 GTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 818164
Score = 109 bits (120), Expect = 1e-18
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || ||||||||||| ||||| || ||||| |||||||| || || || || || ||
Sbjct 755827 TCTTCCAATTGTTTTCCTGCAAAGATCAATCTTTGTTGATCTGGTGGGATCCCCTCCTTG 755768
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| || |||| || | ||| ||||||||| ||| ||| || || ||||| ||
Sbjct 755767 TCTTGGATCTTGGCCTTGACATTATCAATAGTATCTGAACTCTCCACCTCGAGAGTGATC 755708
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || ||||| ||||| || || || |||||
Sbjct 755707 GTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 755673
>seq3274
Length=969234
Score = 96.9 bits (106), Expect = 6e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
|| || ||||| || || | | ||| ||||||||||| || ||||| |||||||| ||
Sbjct 910491 TGCTTCCCGGCGAAGATCAGACGCTGCTGATCAGGAGGAATCCCTTCCTTATCTTGAATC 910432
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|||| || | ||| ||||||||||| ||||| || || || || || |||||
Sbjct 910431 TTGGCCTTAACATTGTCGATAGTATCGGAGCTTTCAACCTCAAGGGTGATCGTCTTACCC 910372
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| || ||||| |||||
Sbjct 910371 GTTAGGGTTTTAACGAATATCTGCAT 910346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899366510592000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |