Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq18882 163 4e-34 seq20901 161 2e-33 seq5786 125 1e-22 seq23336 87.8 3e-11 >seq18882 Length=869960 Score = 163 bits (180), Expect = 4e-34 Identities = 200/268 (75%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || ||||||||| ||||||| | |||||| |||||||| ||||||||| Sbjct 814568 GCCTCGGCGACCTGGACCTCCGTCATGAACCTGCCGGCGAGGTTCTCGAGGACGATGCCG 814627 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||||||||| |||||||| |||||| ||| ||||| |||||| || | || Sbjct 814628 TCGGAGGCGGCGAAGAAGGCGAGCACGTGCGTGACGAAGTGCTTCTCGTCAGCGGTTAGG 814687 Query 796270 GAGACCCAGTGGACCGTG-TC-GGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGG 796327 | |||||||| | | | || ||| || || || ||||| ||||||||||| || | Sbjct 814688 GCCTCCCAGTGG-CGGAGATCTTGCG-AAAGATCAACTTCCTCAGCGGTCCAAAACGACG 814745 Query 796328 CCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGC 796387 | ||||| || |||||||| ||||| || || |||| | || ||||||| | ||| | Sbjct 814746 CTTCGGCTTTCTTGTACATTTCCCAAATTTGTGGGTACTGAATCGGGAACATACAAAATC 814805 Query 796388 GATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 ||| ||| || | ||| |||||||| Sbjct 814806 GATCGGGATTTGGGGCTAGAAGCGGCTC 814833 Score = 154 bits (170), Expect = 2e-31 Identities = 205/285 (72%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 794380 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAG 794439 || ||||| | || ||||| ||||||||||| || || || ||||| || ||||| || Sbjct 814283 CCCGGCATTAACCCTCGCTTTTTGAGCCAAAATATCGCGCAAAAACTCCCTGAGAAGAAA 814342 Query 794440 ATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTG 794499 || ||||| ||| ||||| ||| | | |||||| ||||| ||| ||| || Sbjct 814343 ATCCCCTCCACGCAAGCAAACGCGATTAATCTCTCGGCGAAAGTCTCCGAGCCGTC---- 814398 Query 794500 TTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG 794559 |||||| || | ||||||| || || || || |||| ||||| ||||||||| Sbjct 814399 --GATCCAATTTAACGCCCACGTGGCTTTCTTTGCGACGCAGGGAACCGTTTCGATGGCG 814456 Query 794560 CGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAG 794619 ||||||| | | ||| ||| | | || |||| ||| || || | || |||||||| Sbjct 814457 TGAAAGAGACGATTCTTTTCGTCGGAGTTTTTGATGTAAGTTTCTAGAAGCAGCGAGTAC 814516 Query 794620 GTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAG 794664 | || ||||||||||| || |||||||| |||||||| || ||| Sbjct 814517 ATTTCGGAGTGGATGTTCTCAATGGCGATTTGGAAGCCGTAGAAG 814561 >seq20901 Length=225483 Score = 161 bits (178), Expect = 2e-33 Identities = 230/324 (71%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| || ||| | ||||| ||| || || ||||| | |||||||| Sbjct 70635 CCTTCGTCTCGCGAGATTAGCTCGTTTGAGAAGGTTAGCCCCGGCATTAACCCGCGCTTT 70694 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || | |||||| || || |||||||||||||||||||| || || || ||| ||||| Sbjct 70695 TTTAACCAAAATATCGCGCAGAAACTGCCCGAGAAAAATATCCCTTCCACGCAAGCAAAC 70754 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | | || | ||| || || || ||| ||| || |||||| || | ||||| Sbjct 70755 GCTATCAGTCTCTCCGCGAATGTCTCCGAGCCGTC------GATCCAATTTAGGGCCCAA 70808 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || |||||| | || | |||||||| || | ||||||||| | | || ||| ||| Sbjct 70809 TCGGCCTTTCTGGCAACGCACGGCACCGTTTCAAAGGCGCGAAATAAGCGGCTCTTTTCG 70868 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | | || ||| | ||| || || | ||||||||||| | || ||||||||||| ||| Sbjct 70869 TCGGAGTTCTTTATGTACGTTTCTAGAAGGAGCGAGTACATTTCGGAGTGGATGTTCTCG 70928 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 |||||||| |||||||| || ||| Sbjct 70929 ATGGCGATTTGGAAGCCGTAGAAG 70952 Score = 149 bits (164), Expect = 1e-29 Identities = 197/269 (73%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| |||||||| || |||||||| | | | || ||||| || ||||| || Sbjct 70959 GCCTCGGAGACTTGGACTTCTTTCATGAACCTGGCAGCGAGGTTTTCGAGGACGATTCCA 71018 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || ||||||||| |||||||| ||||| |||| ||||| ||||||| || | || Sbjct 71019 TCCGAGGCGGCGAAGAAGGCGAGCACGTGAGTGATGAAGTGTTTCTCGTCGGCGGTTAGG 71078 Query 796270 GAGACCCAGTGGACCGTGTCG-GCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 || |||| ||| |||| ||| | |||||||||||||| || |||||||| || || Sbjct 71079 GATTCCCACTGGCGGATGTCCTGCGAC-AGGTCGACCTCCTCCGCCGTCCAAAATGAAGC 71137 Query 796329 CTCGGCCTTTTTGTACATCTCCC--ATATCCGTTGGTAGCGGATGGGGAACAGAACAAAG 796386 ||||| || |||||||| |||| || |||| |||| |||| || |||| || Sbjct 71138 TTCGGCTTTCTTGTACATTTCCCAGATTTCCG--GGTACTGGATTGGAAACATGCAGAAT 71195 Query 796387 CGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || | |||||| | |||||||||||| Sbjct 71196 CGGTCTGGGTTCGGGGTTAGCAGCGGCTC 71224 >seq5786 Length=788143 Score = 125 bits (138), Expect = 1e-22 Identities = 177/245 (72%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||| ||||| || ||||||||| |||| | ||| ||| ||| Sbjct 312290 TGAACTTGGTGACGGCCTTGGTCCCCTCCGATACGGCGTGCTTGGCTAATTCACCGGGCA 312349 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || | |||||||||||||||||| | | |||||| |||||| | Sbjct 312350 AGACCAATCTCACGGCGGTCTGGATCTCCCTCGACGTGATCGTCGGCTTCTTGTTGTACC 312409 Query 1485590 GCGCCAGGCGGCCGGCCTC-GGTGCCGA-TGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 ||| ||||| ||||| | ||| | | | |||| |||||||||| || ||| Sbjct 312410 TCGCGAGGCGAGACGCCTCTTGGGCCAACTTC--TCGAAGATGTCGTTGATGAAACTGTT 312467 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||| | ||| ||||||| || | ||||| || |||||||| || ||||| Sbjct 312468 CATGATGCCCATGGCCTTGCTGGAGATACCGATATCGGGATGAACCTGCTTCAGGACCTT 312527 Query 1485708 GTAAA 1485712 | ||| Sbjct 312528 GAAAA 312532 >seq23336 Length=1024205 Score = 87.8 bits (96), Expect = 3e-11 Identities = 112/153 (73%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 2035606 TTTGCGA-GGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGAC 2035664 ||||||| ||| | ||| || |||||||| || | | || ||||||||||| ||| Sbjct 70482 TTTGCGAAGGTAGGGCAAGATACGCTCTTTGACCTGTTAATGGCAGCCAACTACCTGGAC 70423 Query 2035665 ATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCG 2035724 |||||| | | || || ||| ||| | || || || || | |||||||||||||| Sbjct 70422 ATCAAGAGCTTGCTGGACTTGCTCTGCCAAACTGTTGCTGACATGATCAAGGGCAAGTCT 70363 Query 2035725 CCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 || || || |||||| ||||||| ||||| || Sbjct 70362 CCTGAAGAGATCCGCCAGACCTTCCACATCCAG 70330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7913523211238400