Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq5785 104 2e-17 seq23635 93.3 3e-14 seq3274 91.5 1e-13 seq4300 86.0 5e-12 >seq5785 Length=266748 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| ||||| || ||| | || ||||| ||||||||| | ||| ||| | Sbjct 166299 ATGCAAATCTTTGTTAAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCG 166240 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | | || ||| |||||| || || |||||| | || || ||| Sbjct 166239 GATACTATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCCGCCTGACCAG 166180 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| ||||| | ||| ||||| ||||| || || | || | || ||||||||| Sbjct 166179 CAGAGGCTTATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGTACCCTTGCTGACTACAAC 166120 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||| |||||||| || | ||| ||||| Sbjct 166119 ATTCAGAAGGAGTCCACCCTTCACTTGGTG 166090 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| ||||| || ||| | || ||||| ||||||||| | ||| ||| | Sbjct 167572 ATGCAAATCTTTGTTAAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCG 167513 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | | || ||| |||||| || || |||||| | || || ||| Sbjct 167512 GATACTATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCCGCCTGACCAG 167453 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| ||||| | ||| ||||| ||||| || || | || | || ||||||||| Sbjct 167452 CAGAGGCTTATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGTACCCTTGCCGACTACAAC 167393 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||| |||||||| || | ||| ||||| Sbjct 167392 ATTCAGAAGGAGTCCACCCTTCACTTGGTG 167363 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||| || ||| | || || ||||| || || | || ||| | Sbjct 165843 ATGCAAATTTTTGTGAAGACTCTCACTGGAAAAACAATCACTCTGGAGGTAGAGAGTTCG 165784 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| ||||| |||||| | || |||||| Sbjct 165783 GACACCATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCAGATCAG 165724 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | |||| ||| || || ||||| || || | | || | || ||||||||| Sbjct 165723 CAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAAGATGGGAGGACCCTTGCAGACTACAAC 165664 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||| ||||| || || ||||| ||||||||||| |||| || |||| Sbjct 165663 ATTCAGAAGGAATCCACATTGCATTTGGTGTTGAGACTGCGTGGAGGAA 165615 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||| || ||| | || || ||||| || || | || ||| | Sbjct 167116 ATGCAAATTTTTGTGAAGACTCTCACTGGAAAAACAATCACTCTGGAGGTAGAGAGTTCG 167057 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| ||||| || ||| | || |||||| Sbjct 167056 GACACCATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATTCCACCAGATCAG 166997 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | |||| ||| || || ||||| || || | | || | || ||||||||| Sbjct 166996 CAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAAGATGGGAGGACCCTTGCAGACTACAAC 166937 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||| ||||| || || ||||| ||||||||||| |||| || |||| Sbjct 166936 ATTCAGAAGGAATCCACATTGCATTTGGTGTTGAGACTGCGTGGAGGAA 166888 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || ||||| |||||| | || || ||||| || ||| | ||| ||| | Sbjct 166528 AATGCAGATCTTTGTGAAAACTCTCACTGGTAAAACTATCACCTTGGAAGTTGAGAGTTC 166469 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | | || || || ||| ||||| || ||| | || || || Sbjct 166468 TGATACAATTGACAATGTCAAGGCTAAAATTCAGGATAAGGAGGGCATCCCACCTGACCA 166409 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||||||| |||| ||| || || ||||| || || | || | || |||||||| Sbjct 166408 GCAGAGACTGATTTTTGCTGGAAAGCAGCTAGAAGATGGTCGTACCCTTGCTGACTACAA 166349 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 |||||| ||||| ||||| | ||| ||||| Sbjct 166348 CATTCAGAAGGAATCTACCCTTCACTTGGTG 166318 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || ||||| |||||| | || || ||||| || ||| | ||| ||| | Sbjct 167801 AATGCAGATCTTTGTGAAAACTCTCACTGGTAAAACTATCACCTTGGAAGTTGAGAGTTC 167742 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | | || || || ||| ||||| || ||| | || || || Sbjct 167741 TGATACAATTGACAATGTCAAGGCTAAAATTCAGGATAAGGAGGGCATCCCACCTGACCA 167682 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||||||| |||| ||| || || ||||| || || | || | || |||||||| Sbjct 167681 GCAGAGACTGATTTTTGCTGGAAAGCAGCTAGAAGATGGTCGTACCCTTGCTGACTACAA 167622 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 |||||| ||||| ||||| | ||| ||||| Sbjct 167621 CATTCAGAAGGAATCTACCCTTCACTTGGTG 167591 >seq23635 Length=3246295 Score = 93.3 bits (102), Expect = 3e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708 || || |||||| | || ||||||||||||| | |||| ||| ||||||||| |||| Sbjct 165632 GACAAGGAAGGCATTCCTCCGGATCAGCAGAGATTGATTTTTGCTGGTAAACAGTTGGAA 165691 Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 || | || ||| | || || || ||||||||||||||||| || | ||| |||| || Sbjct 165692 GATGGCAGAACGCTTGCAGATTATAACATTCAAAAGGAGTCGACACTTCACTTGGTCCTG 165751 Query 107769 AGATTGCGAGGGGGAAATA 107787 || || | || |||| || Sbjct 165752 AGGCTGAGGGGAGGAACTA 165770 >seq3274 Length=969234 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||| || || || ||||| |||| ||||| ||||||||| ||||| ||| | Sbjct 909887 AAAATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATTACCCTCGAAGTCGAGAGT 909946 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| || ||| | | || || ||||| || || ||||| | || ||| Sbjct 909947 TCCGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGAC 910006 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||| || || | || || || || || ||||||| | || |||| || ||| Sbjct 910007 CAGCAGAGGCTGATCTTCGCTGGAAAGCAACTCGAGGACGGCCGCACCTTGGCTGATTAC 910066 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || ||||||||||| ||| | ||| | ||| Sbjct 910067 AATATCCAAAAGGAGTCGACGCTTCACCTCGTG 910099 >seq4300 Length=903212 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| ||||| ||||| ||| | || || ||||| ||||| | || |||| ||| Sbjct 850814 ATGCAGATTTTCGTCAAGACTCTTACTGGGAAAACAATTACTCTGGAGGTGGAGAGCTCT 850873 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | | || || |||||| ||||| ||||| | || ||||| Sbjct 850874 -GATACCATTGACAATGTCAAGGCTAAGATTCAGGATAAGGAAGGGATTCCACCTGATCA 850932 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | ||| || || ||||| ||||| | | ||| | || || || || Sbjct 850933 GCAGAGGCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGAACTTTAGCTGATTATAA 850992 Query 107735 CATTCAAAAGGAGTCTACG 107753 ||||||||||||||| ||| Sbjct 850993 CATTCAAAAGGAGTCCACG 851011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398752350438400