Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq25300 84.2 5e-11 >seq25300 Length=5305897 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 279908 TTCAGTTGTTTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTAT 279967 ||| | | |||||| ||||| || || || ||| ||||||||||| | |||||| Sbjct 4956421 TTCTGCTCTTTCAAGAGAAACTTTGTCAAAGAAGCGAAAGTTGCTCAGTTCTCTGGTTAT 4956362 Query 279968 GTTTCAGAACATGCAGGTTATCATCACGGTGA--AGCGTCTCTTCAAGGTGCTATTGTAG 280025 ||||| || ||| | | ||||||||||||||| | |||| || | | || ||| Sbjct 4956361 GTTTCCGAGCATTCTGCTTATCATCACGGTGAGCAAAGTCTTGCCA--GCACCATCTTAG 4956304 Query 280026 GTCTTGCCCAAGATTTTATGGCTTCAAACAACTTAAATCTGCTTTCACCAAATGGTCAAT 280085 || | || || |||||| ||| |||||| | || || ||| || ||||| |||| Sbjct 4956303 GTATGGCACAGGATTTTGTGGGCAGCAACAACATTAACCTTCTTCAGCCTAATGGCCAAT 4956244 Query 280086 TTGGTTCTCGTA 280097 |||| |||||| Sbjct 4956243 TTGGCACTCGTA 4956232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186423525401600