Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq25300 84.2 5e-11
>seq25300
Length=5305897
Score = 84.2 bits (92), Expect = 5e-11
Identities = 135/192 (70%), Gaps = 4/192 (2%)
Strand=Plus/Minus
Query 279908 TTCAGTTGTTTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTAT 279967
||| | | |||||| ||||| || || || ||| ||||||||||| | ||||||
Sbjct 4956421 TTCTGCTCTTTCAAGAGAAACTTTGTCAAAGAAGCGAAAGTTGCTCAGTTCTCTGGTTAT 4956362
Query 279968 GTTTCAGAACATGCAGGTTATCATCACGGTGA--AGCGTCTCTTCAAGGTGCTATTGTAG 280025
||||| || ||| | | ||||||||||||||| | |||| || | | || |||
Sbjct 4956361 GTTTCCGAGCATTCTGCTTATCATCACGGTGAGCAAAGTCTTGCCA--GCACCATCTTAG 4956304
Query 280026 GTCTTGCCCAAGATTTTATGGCTTCAAACAACTTAAATCTGCTTTCACCAAATGGTCAAT 280085
|| | || || |||||| ||| |||||| | || || ||| || ||||| ||||
Sbjct 4956303 GTATGGCACAGGATTTTGTGGGCAGCAACAACATTAACCTTCTTCAGCCTAATGGCCAAT 4956244
Query 280086 TTGGTTCTCGTA 280097
|||| ||||||
Sbjct 4956243 TTGGCACTCGTA 4956232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186423525401600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |