Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq22333 578 1e-160 seq17466 408 1e-109 seq14178 226 8e-55 >seq22333 Length=1412734 Score = 578 bits (640), Expect = 1e-160 Identities = 724/983 (74%), Gaps = 10/983 (1%) Strand=Plus/Plus Query 19510 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 19569 ||||||| | ||| || | ||||| ||||| |||| |||||||| ||||||| Sbjct 733228 TAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGAT 733287 Query 19570 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAG 19628 || | | | | || || |||| || ||||| || |||||||| ||||| |||| Sbjct 733288 CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAG 733346 Query 19629 TTGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCA 19688 | || ||||| || || || ||||| || || || || |||||||||||||| || | Sbjct 733347 TAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTA 733406 Query 19689 TATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTG 19746 | || || || | |||| | | ||| || ||||| | || || ||||| || || Sbjct 733407 TTTCTGGTGCGATTATTCCTACTTCTGCA--GCTATCGGTTTGCATTTTTACCCGATATG 733464 Query 19747 GGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTT 19806 |||||| || ||||||||||| | ||||| || || || | | || | || | Sbjct 733465 GGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCT 733524 Query 19807 CCACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACT 19866 |||||| | |||| | | ||||||||| || |||||||||||||| | || || Sbjct 733525 ACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCT 733584 Query 19867 AGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGT 19926 || ||| | ||||||||| |||||| || || ||||| |||||||| || |||| || Sbjct 733585 GGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCTGCTGT 733644 Query 19927 CTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCT 19985 ||||| | ||||||| | ||||| || || || || |||| ||||||| | || |||| Sbjct 733645 -TTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCT 733703 Query 19986 CGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGT 20045 | ||||| ||||||| |||| | |||||||| || || || ||||| || |||||||| | Sbjct 733704 CTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCAT 733763 Query 20046 TCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTT 20105 |||||||| | || || |||||||||||||| || || ||||||||||| ||||| |||| Sbjct 733764 TCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 733823 Query 20106 CGCTTGTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGT 20164 | | || || || | | ||| | | || || || ||| | ||| | || | ||| Sbjct 733824 CCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 733882 Query 20165 TACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGA 20224 |||| || || ||||| ||||| || ||||| |||||||| ||||| ||||| ||||| Sbjct 733883 TACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGC 733942 Query 20225 CGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCT 20284 || |||||||||||||| ||| |||||||||| |||||| |||| |||||||| ||| Sbjct 733943 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCT 734002 Query 20285 GCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAAT 20344 || ||||| || ||||| || |||||| |||| || || || || ||||| || || Sbjct 734003 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAAC 734062 Query 20345 CTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACT 20404 || || |||||||| || ||||| || | | || | | |||||||| ||| |||| Sbjct 734063 CTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC 734122 Query 20405 TGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCT 20464 |||||||| ||| | ||||||||||| || || | || || ||||||||||| |||||| Sbjct 734123 TGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 734182 Query 20465 CATAACTTCCCACTTGACCTTGC 20487 ||||||||||| || ||||| || Sbjct 734183 CATAACTTCCCTCTAGACCTAGC 734205 Score = 297 bits (328), Expect = 6e-76 Identities = 323/426 (76%), Gaps = 2/426 (0%) Strand=Plus/Plus Query 20063 GCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCG 20122 |||||||||||||| || || ||||||||||| ||||| ||||| | || || || | Sbjct 732403 GCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAA 732461 Query 20123 CTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGA 20181 ||| | | || || || ||| | || | || | ||||||| || || ||||| Sbjct 732462 TTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTCAAGA 732521 Query 20182 AGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATA 20241 ||||| || ||||| |||||||| ||||| ||||| ||||| || |||||||||||||| Sbjct 732522 GGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATA 732581 Query 20242 CGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGG 20301 ||| |||||||||| |||||| |||| |||||||| ||||| ||||| || ||||| Sbjct 732582 TGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGG 732641 Query 20302 GATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTT 20361 || |||||| |||| || || || || ||||| || || || || |||||||| || Sbjct 732642 TATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTT 732701 Query 20362 TAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAA 20421 ||||| || | | || | | |||||||| ||| |||| |||||||| ||| | || Sbjct 732702 CAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAA 732761 Query 20422 TCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGA 20481 ||||||||| || || | || || ||||||||||| ||||||||||||||||| || || Sbjct 732762 TCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 732821 Query 20482 CCTTGC 20487 ||| || Sbjct 732822 CCTAGC 732827 >seq17466 Length=9900 Score = 408 bits (452), Expect = 1e-109 Identities = 438/572 (77%), Gaps = 8/572 (1%) Strand=Plus/Plus Query 19920 CTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTG 19978 |||| || ||||| | | || || ||||||| || || ||||| |||| ||||||||| Sbjct 9176 CTGCTGT-TTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTA 9234 Query 19979 GGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATG 20038 || || || ||||| ||||||| ||| | |||||||| || || || ||||| || ||| Sbjct 9235 GGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATG 9294 Query 20039 CACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATG 20098 || || || |||||| | ||||| |||||||||||||| || || ||||||||||| ||| Sbjct 9295 CATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATG 9354 Query 20099 CACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGTCAG-- 20155 || ||||| | || || || | | ||| | | || || |||||| | || ||| | Sbjct 9355 CATGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAATGA--GTCTGCT 9411 Query 20156 AACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGT 20215 || | |||||||| ||||| |||||||||||||| |||||||| || || ||||| ||| Sbjct 9412 AATGAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGT 9471 Query 20216 TACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTC 20275 || ||||| || || ||||||||||| ||| ||||||||| |||||| |||||||| Sbjct 9472 TATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTC 9531 Query 20276 TTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATG 20335 ||| | ||||| ||||| || |||||||| |||||| |||| || || || ||| ||| Sbjct 9532 TTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATG 9591 Query 20336 GCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTC 20395 || || || || || || ||||| || ||||| || | | || | | ||||| || Sbjct 9592 GCATTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTT 9651 Query 20396 ATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAA 20455 ||| ||||||||||||| || |||| ||||||||||| || | || || ||||| ||| Sbjct 9652 ATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAA 9711 Query 20456 CGGAATGCTCATAACTTCCCACTTGACCTTGC 20487 || |||||||| |||||||| || ||||| || Sbjct 9712 CGTAATGCTCACAACTTCCCTCTAGACCTAGC 9743 Score = 131 bits (144), Expect = 5e-26 Identities = 241/349 (69%), Gaps = 6/349 (2%) Strand=Plus/Plus Query 19511 AACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATT 19570 |||||| | ||| ||| | ||||||||||| | || ||||| || ||||||| Sbjct 8824 AACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATC 8883 Query 19571 CCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGT 19629 || | || ||| || | || | || ||||| || ||||| || ||||| ||||| Sbjct 8884 CC-TACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGT 8942 Query 19630 TGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCAT 19689 || |||||||| || || || || || || ||| | |||||||||||||| || || Sbjct 8943 AGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 9002 Query 19690 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 19747 || || || | |||| | | || || |||||| | || || |||||||||||| Sbjct 9003 TTCTGGTGCTATTATTCCTACTTCTGCG--GCGATCGGATTGCATTTTTACCCAATTTGG 9060 Query 19748 GAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19807 |||||| || ||||||||||| | ||||| || || || | | || | || | Sbjct 9061 GAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTA 9120 Query 19808 CACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTA 19856 |||||| | |||| | | ||| ||||| || ||||||||||||| Sbjct 9121 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTA 9169 >seq14178 Length=3042336 Score = 226 bits (250), Expect = 8e-55 Identities = 247/327 (76%), Gaps = 11/327 (3%) Strand=Plus/Minus Query 20162 GGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTT 20221 ||||||| || || ||||| ||||| || ||||| |||||||| ||| | ||||| ||| Sbjct 2899413 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTACGGTTATTTT 2899354 Query 20222 GGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTT 20281 || | |||||||||||||| ||| | |||||||| |||||| |||| |||||||| Sbjct 2899353 GGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTACATTTCTTCCTG 2899294 Query 20282 GCTGCCT-GGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTT 20340 ||||| | |||| || ||||| || |||||| |||| ||||| || || || || | Sbjct 2899293 GCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTAGCACTATAGCTTG 2899234 Query 20341 TAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGA 20400 || || || |||||||| || ||||| || | || | |||||||| ||| | Sbjct 2899233 CAACCTAAATGGTTTCAATTTCAACCAATC---TATC-------AAGGTCGTGTAATTAA 2899184 Query 20401 TACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAA 20460 ||| |||||||| ||| | ||||||||||| ||||| || || ||||||||||| || Sbjct 2899183 TACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATGCATGAACGTAA 2899124 Query 20461 TGCTCATAACTTCCCACTTGACCTTGC 20487 | |||||||||||| || ||||| || Sbjct 2899123 AGGTCATAACTTCCCTCTAGACCTAGC 2899097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148783556044800