Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_025456.1
Length=46547
Score E
Sequences producing significant alignments: (Bits) Value
seq22333 578 1e-160
seq17466 408 1e-109
seq14178 226 8e-55
>seq22333
Length=1412734
Score = 578 bits (640), Expect = 1e-160
Identities = 724/983 (74%), Gaps = 10/983 (1%)
Strand=Plus/Plus
Query 19510 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 19569
||||||| | ||| || | ||||| ||||| |||| |||||||| |||||||
Sbjct 733228 TAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGAT 733287
Query 19570 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAG 19628
|| | | | | || || |||| || ||||| || |||||||| ||||| ||||
Sbjct 733288 CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAG 733346
Query 19629 TTGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCA 19688
| || ||||| || || || ||||| || || || || |||||||||||||| || |
Sbjct 733347 TAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTA 733406
Query 19689 TATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTG 19746
| || || || | |||| | | ||| || ||||| | || || ||||| || ||
Sbjct 733407 TTTCTGGTGCGATTATTCCTACTTCTGCA--GCTATCGGTTTGCATTTTTACCCGATATG 733464
Query 19747 GGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTT 19806
|||||| || ||||||||||| | ||||| || || || | | || | || |
Sbjct 733465 GGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCT 733524
Query 19807 CCACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACT 19866
|||||| | |||| | | ||||||||| || |||||||||||||| | || ||
Sbjct 733525 ACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCT 733584
Query 19867 AGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGT 19926
|| ||| | ||||||||| |||||| || || ||||| |||||||| || |||| ||
Sbjct 733585 GGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCTGCTGT 733644
Query 19927 CTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCT 19985
||||| | ||||||| | ||||| || || || || |||| ||||||| | || ||||
Sbjct 733645 -TTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCT 733703
Query 19986 CGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGT 20045
| ||||| ||||||| |||| | |||||||| || || || ||||| || |||||||| |
Sbjct 733704 CTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCAT 733763
Query 20046 TCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTT 20105
|||||||| | || || |||||||||||||| || || ||||||||||| ||||| ||||
Sbjct 733764 TCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 733823
Query 20106 CGCTTGTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGT 20164
| | || || || | | ||| | | || || || ||| | ||| | || | |||
Sbjct 733824 CCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 733882
Query 20165 TACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGA 20224
|||| || || ||||| ||||| || ||||| |||||||| ||||| ||||| |||||
Sbjct 733883 TACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGC 733942
Query 20225 CGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCT 20284
|| |||||||||||||| ||| |||||||||| |||||| |||| |||||||| |||
Sbjct 733943 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCT 734002
Query 20285 GCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAAT 20344
|| ||||| || ||||| || |||||| |||| || || || || ||||| || ||
Sbjct 734003 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAAC 734062
Query 20345 CTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACT 20404
|| || |||||||| || ||||| || | | || | | |||||||| ||| ||||
Sbjct 734063 CTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC 734122
Query 20405 TGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCT 20464
|||||||| ||| | ||||||||||| || || | || || ||||||||||| ||||||
Sbjct 734123 TGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 734182
Query 20465 CATAACTTCCCACTTGACCTTGC 20487
||||||||||| || ||||| ||
Sbjct 734183 CATAACTTCCCTCTAGACCTAGC 734205
Score = 297 bits (328), Expect = 6e-76
Identities = 323/426 (76%), Gaps = 2/426 (0%)
Strand=Plus/Plus
Query 20063 GCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCG 20122
|||||||||||||| || || ||||||||||| ||||| ||||| | || || || |
Sbjct 732403 GCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAA 732461
Query 20123 CTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGA 20181
||| | | || || || ||| | || | || | ||||||| || || |||||
Sbjct 732462 TTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTCAAGA 732521
Query 20182 AGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATA 20241
||||| || ||||| |||||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct 732522 GGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATA 732581
Query 20242 CGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGG 20301
||| |||||||||| |||||| |||| |||||||| ||||| ||||| || |||||
Sbjct 732582 TGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGG 732641
Query 20302 GATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTT 20361
|| |||||| |||| || || || || ||||| || || || || |||||||| ||
Sbjct 732642 TATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTT 732701
Query 20362 TAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAA 20421
||||| || | | || | | |||||||| ||| |||| |||||||| ||| | ||
Sbjct 732702 CAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAA 732761
Query 20422 TCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGA 20481
||||||||| || || | || || ||||||||||| ||||||||||||||||| || ||
Sbjct 732762 TCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 732821
Query 20482 CCTTGC 20487
||| ||
Sbjct 732822 CCTAGC 732827
>seq17466
Length=9900
Score = 408 bits (452), Expect = 1e-109
Identities = 438/572 (77%), Gaps = 8/572 (1%)
Strand=Plus/Plus
Query 19920 CTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTG 19978
|||| || ||||| | | || || ||||||| || || ||||| |||| |||||||||
Sbjct 9176 CTGCTGT-TTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTA 9234
Query 19979 GGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATG 20038
|| || || ||||| ||||||| ||| | |||||||| || || || ||||| || |||
Sbjct 9235 GGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATG 9294
Query 20039 CACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATG 20098
|| || || |||||| | ||||| |||||||||||||| || || ||||||||||| |||
Sbjct 9295 CATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATG 9354
Query 20099 CACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGTCAG-- 20155
|| ||||| | || || || | | ||| | | || || |||||| | || ||| |
Sbjct 9355 CATGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAATGA--GTCTGCT 9411
Query 20156 AACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGT 20215
|| | |||||||| ||||| |||||||||||||| |||||||| || || ||||| |||
Sbjct 9412 AATGAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGT 9471
Query 20216 TACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTC 20275
|| ||||| || || ||||||||||| ||| ||||||||| |||||| ||||||||
Sbjct 9472 TATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTC 9531
Query 20276 TTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATG 20335
||| | ||||| ||||| || |||||||| |||||| |||| || || || ||| |||
Sbjct 9532 TTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATG 9591
Query 20336 GCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTC 20395
|| || || || || || ||||| || ||||| || | | || | | ||||| ||
Sbjct 9592 GCATTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTT 9651
Query 20396 ATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAA 20455
||| ||||||||||||| || |||| ||||||||||| || | || || ||||| |||
Sbjct 9652 ATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAA 9711
Query 20456 CGGAATGCTCATAACTTCCCACTTGACCTTGC 20487
|| |||||||| |||||||| || ||||| ||
Sbjct 9712 CGTAATGCTCACAACTTCCCTCTAGACCTAGC 9743
Score = 131 bits (144), Expect = 5e-26
Identities = 241/349 (69%), Gaps = 6/349 (2%)
Strand=Plus/Plus
Query 19511 AACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATT 19570
|||||| | ||| ||| | ||||||||||| | || ||||| || |||||||
Sbjct 8824 AACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATC 8883
Query 19571 CCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGT 19629
|| | || ||| || | || | || ||||| || ||||| || ||||| |||||
Sbjct 8884 CC-TACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGT 8942
Query 19630 TGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCAT 19689
|| |||||||| || || || || || || ||| | |||||||||||||| || ||
Sbjct 8943 AGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 9002
Query 19690 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 19747
|| || || | |||| | | || || |||||| | || || ||||||||||||
Sbjct 9003 TTCTGGTGCTATTATTCCTACTTCTGCG--GCGATCGGATTGCATTTTTACCCAATTTGG 9060
Query 19748 GAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19807
|||||| || ||||||||||| | ||||| || || || | | || | || |
Sbjct 9061 GAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTA 9120
Query 19808 CACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTA 19856
|||||| | |||| | | ||| ||||| || |||||||||||||
Sbjct 9121 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTA 9169
>seq14178
Length=3042336
Score = 226 bits (250), Expect = 8e-55
Identities = 247/327 (76%), Gaps = 11/327 (3%)
Strand=Plus/Minus
Query 20162 GGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTT 20221
||||||| || || ||||| ||||| || ||||| |||||||| ||| | ||||| |||
Sbjct 2899413 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTACGGTTATTTT 2899354
Query 20222 GGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTT 20281
|| | |||||||||||||| ||| | |||||||| |||||| |||| ||||||||
Sbjct 2899353 GGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTACATTTCTTCCTG 2899294
Query 20282 GCTGCCT-GGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTT 20340
||||| | |||| || ||||| || |||||| |||| ||||| || || || || |
Sbjct 2899293 GCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTAGCACTATAGCTTG 2899234
Query 20341 TAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGA 20400
|| || || |||||||| || ||||| || | || | |||||||| ||| |
Sbjct 2899233 CAACCTAAATGGTTTCAATTTCAACCAATC---TATC-------AAGGTCGTGTAATTAA 2899184
Query 20401 TACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAA 20460
||| |||||||| ||| | ||||||||||| ||||| || || ||||||||||| ||
Sbjct 2899183 TACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATGCATGAACGTAA 2899124
Query 20461 TGCTCATAACTTCCCACTTGACCTTGC 20487
| |||||||||||| || ||||| ||
Sbjct 2899123 AGGTCATAACTTCCCTCTAGACCTAGC 2899097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148783556044800
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