Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq22333 567 2e-157 seq17466 363 5e-96 seq14178 237 5e-58 >seq22333 Length=1412734 Score = 567 bits (628), Expect = 2e-157 Identities = 720/983 (73%), Gaps = 8/983 (1%) Strand=Plus/Plus Query 28638 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 28697 ||||||| | ||| || | ||||| ||||| |||| |||||||| ||||||| Sbjct 733228 TAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGAT 733287 Query 28698 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAG 28756 || | | | | || || |||| || ||||| || |||||||| || || |||| Sbjct 733288 CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAG 733346 Query 28757 TTGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCA 28816 | || ||||| || || || |||||||| ||||| ||| || ||||||||||| || | Sbjct 733347 TAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTA 733406 Query 28817 TATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTG 28874 | || || || | | || | | ||| || ||||| | || || ||||| || || Sbjct 733407 TTTCTGGTGCGATTATTCCTACTTCTGCA--GCTATCGGTTTGCATTTTTACCCGATATG 733464 Query 28875 GGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTT 28934 |||||| || ||||||||||| | ||||| || || || | | || | || | Sbjct 733465 GGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCT 733524 Query 28935 CCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACT 28994 |||||| | |||| || | ||||||||| || |||||||||||||| | || || Sbjct 733525 ACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCT 733584 Query 28995 AGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGT 29054 || ||| | || |||||| ||| ||||| |||||||| || ||||| || |||| || Sbjct 733585 GGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCTGCTGT 733644 Query 29055 TTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTC 29114 |||| | |||||||| |||||||||| |||| || | |||||| | || || || Sbjct 733645 TTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTC 733704 Query 29115 AGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTT 29174 || || ||||||| |||| | || ||||| || || || ||||| || |||||||| || Sbjct 733705 TGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATT 733764 Query 29175 CCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTC 29234 ||||||| | ||||| ||||| || ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 733765 CCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC 733824 Query 29235 GCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTT 29293 | || || || | | ||| | | || || || ||| | ||| || | |||| Sbjct 733825 CTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 733883 Query 29294 ACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGAC 29353 ||| || || ||||| ||||| |||||||| |||||||| ||||||||||| ||||| | Sbjct 733884 ACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCC 733943 Query 29354 GTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTG 29413 | |||||||||||||||||| |||||| ||| |||||| |||| |||||||| |||| Sbjct 733944 GATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTG 734003 Query 29414 CCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATC 29473 | ||||| || ||||| || |||||| |||| || || || || ||||| || || | Sbjct 734004 CTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACC 734063 Query 29474 TGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTT 29533 | || ||||| || || ||||| || | | || | | |||||||| |||||||| | Sbjct 734064 TAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCT 734123 Query 29534 GGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTC 29593 |||||||| || | ||||| |||||||| || | ||||| |||||||| |||||||||| Sbjct 734124 GGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 734183 Query 29594 ATAACTTCCCACTTGATCTGGCT 29616 |||||||||| || || || ||| Sbjct 734184 ATAACTTCCCTCTAGACCTAGCT 734206 Score = 304 bits (336), Expect = 4e-78 Identities = 325/427 (76%), Gaps = 2/427 (0%) Strand=Plus/Plus Query 29191 GCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCG 29250 ||||| || ||||| ||||| ||||| ||||| ||||| ||||| | || || || | Sbjct 732403 GCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAA 732461 Query 29251 CTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGA 29309 ||| | | || || || ||| | | ||| || | ||||||| || || ||||| Sbjct 732462 TTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTCAAGA 732521 Query 29310 AGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATA 29369 ||||| |||||||| |||||||| ||||||||||| ||||| || |||||||||||||| Sbjct 732522 GGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATA 732581 Query 29370 TGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGG 29429 |||| |||||| ||| |||||| |||| |||||||| ||||| ||||| || ||||| Sbjct 732582 TGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGG 732641 Query 29430 GATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTT 29489 || |||||| |||| || || || || ||||| || || || || ||||| || || Sbjct 732642 TATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTT 732701 Query 29490 TAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAA 29549 ||||| || | | || | | |||||||| |||||||| ||||||||| || | || Sbjct 732702 CAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAA 732761 Query 29550 TCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGA 29609 ||| |||||||| || | ||||| |||||||| |||||||||||||||||||| || || Sbjct 732762 TCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 732821 Query 29610 TCTGGCT 29616 || ||| Sbjct 732822 CCTAGCT 732828 >seq17466 Length=9900 Score = 363 bits (402), Expect = 5e-96 Identities = 424/570 (74%), Gaps = 2/570 (0%) Strand=Plus/Plus Query 29048 CTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGG 29107 |||| |||||| | | || || | |||||||| ||| || | |||||||| | Sbjct 9176 CTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAG 9235 Query 29108 GTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGC 29167 | || || || || ||||||| ||| | || ||||| || || || ||||| || |||| Sbjct 9236 GAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGC 9295 Query 29168 ACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGC 29227 | || || |||||| | || || ||||| || ||||| || || ||||| ||||| |||| Sbjct 9296 ATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGC 9355 Query 29228 ACGGTTCGCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAAC 29286 | ||||| | || || || | | ||| | | || || |||||| | ||| || Sbjct 9356 ATGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAAT 9414 Query 29287 TATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTAC 29346 | |||||||| ||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct 9415 GAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTAT 9474 Query 29347 TTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTC 29406 ||||| || || ||||||||||||||| |||||| || |||||| ||||||||||| Sbjct 9475 TTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTC 9534 Query 29407 CTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCG 29466 | ||||| ||||| || |||||||| |||||| |||| || || || ||| ||||| Sbjct 9535 TTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCA 9594 Query 29467 TTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATT 29526 || || || || || || || || ||||| || | | || | | ||||| || ||| Sbjct 9595 TTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATT 9654 Query 29527 AATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGT 29586 ||||||||||||||| | |||| || ||||| || || | ||||||||||| || ||| Sbjct 9655 AATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGT 9714 Query 29587 AATGCTCATAACTTCCCACTTGATCTGGCT 29616 |||||||| |||||||| || || || ||| Sbjct 9715 AATGCTCACAACTTCCCTCTAGACCTAGCT 9744 Score = 125 bits (138), Expect = 2e-24 Identities = 240/349 (69%), Gaps = 6/349 (2%) Strand=Plus/Plus Query 28639 AACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATT 28698 |||||| | ||| ||| | ||||||||||| | || ||||| || ||||||| Sbjct 8824 AACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATC 8883 Query 28699 CCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGT 28757 || | || ||| || | || | || ||||| || ||||| || || || ||||| Sbjct 8884 CC-TACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGT 8942 Query 28758 TGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCAT 28817 || |||||||| || || || ||||| |||| | | || ||||||||||| || || Sbjct 8943 AGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 9002 Query 28818 ATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 28875 || || || | | || | | || || |||||| | || || |||||||||||| Sbjct 9003 TTCTGGTGCTATTATTCCTACTTCTGCG--GCGATCGGATTGCATTTTTACCCAATTTGG 9060 Query 28876 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 28935 |||||| || ||||||||||| | ||||| || || || | | || | || | Sbjct 9061 GAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTA 9120 Query 28936 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTA 28984 |||||| | |||| || | ||| ||||| || ||||||||||||| Sbjct 9121 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTA 9169 >seq14178 Length=3042336 Score = 237 bits (262), Expect = 5e-58 Identities = 250/328 (76%), Gaps = 11/328 (3%) Strand=Plus/Minus Query 29290 GGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTT 29349 ||||||| || || ||||| ||||| |||||||| |||||||| ||| ||||||| ||| Sbjct 2899413 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTACGGTTATTTT 2899354 Query 29350 GGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTT 29409 || | |||||||||||||||||| | |||| ||| |||||| |||| |||||||| Sbjct 2899353 GGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTACATTTCTTCCTG 2899294 Query 29410 GCTGCCT-GGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTT 29468 ||||| | |||| || ||||| || |||||| |||| ||||| || || || || | Sbjct 2899293 GCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTAGCACTATAGCTTG 2899234 Query 29469 TAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAA 29528 || || || ||||| || || ||||| || | || | |||||||| ||||| Sbjct 2899233 CAACCTAAATGGTTTCAATTTCAACCAATC---TATC-------AAGGTCGTGTAATTAA 2899184 Query 29529 TACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAA 29588 ||| ||||||||| || | ||||| ||||||||||| ||||| |||||||| ||||| Sbjct 2899183 TACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATGCATGAACGTAA 2899124 Query 29589 TGCTCATAACTTCCCACTTGATCTGGCT 29616 | |||||||||||| || || || ||| Sbjct 2899123 AGGTCATAACTTCCCTCTAGACCTAGCT 2899096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146621013657600