Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_025464.1
Length=44147
Score E
Sequences producing significant alignments: (Bits) Value
seq22333 600 3e-167
seq17466 398 2e-106
seq14178 197 4e-46
seq3005 100 8e-17
>seq22333
Length=1412734
Score = 600 bits (664), Expect = 3e-167
Identities = 726/981 (74%), Gaps = 8/981 (1%)
Strand=Plus/Plus
Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783
|| ||| ||||| |||| || || || ||||| ||||| || || |||||||| ||
Sbjct 733223 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 733282
Query 18784 ATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACC 18842
||||| || | | | | || ||| | ||| || ||||| |||||||||||||| ||
Sbjct 733283 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 733341
Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902
||| ||||| ||||| || || || || |||||| | || ||| ||||||||||||||
Sbjct 733342 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 733401
Query 18903 CATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCA 18960
|| || || || || | |||| | | ||| || ||||| | || || |||||
Sbjct 733402 TATTATTTCTGGTGCGATTATTCCTACTTCTGCA--GCTATCGGTTTGCATTTTTACCCG 733459
Query 18961 ATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTG 19020
|| |||||||| || ||||||||||| | ||||| || || || | | || |
Sbjct 733460 ATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATT 733519
Query 19021 GTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTAT 19080
|| | |||||| | |||| || | ||||||||| || |||||||||||||| |
Sbjct 733520 GTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTC 733579
Query 19081 CGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCT 19140
|| || || ||||| ||||||||| |||||| || |||||||||||||| ||||| ||
Sbjct 733580 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCT 733639
Query 19141 GCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGT 19200
|| || ||| | |||| ||| | |||||||| ||| || | ||||||| | ||
Sbjct 733640 GCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGA 733699
Query 19201 ATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCAC 19260
|| |||||| ||||||| |||| |||||||||||||||| || |||||||| ||||||
Sbjct 733700 ATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCAC 733759
Query 19261 CCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCAC 19320
|| ||||||||| | || || |||||||| |||||||| || ||||| ||||| |||||
Sbjct 733760 CCATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 733819
Query 19321 GGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTA 19379
||||| |||| || || | ||| | | ||||| || ||| | | |||| || |
Sbjct 733820 GGTTC-CTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 733878
Query 19380 TGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTT 19439
|| |||| || || ||||| ||||| |||||||| || || |||||||| || |||||
Sbjct 733879 AGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTT 733938
Query 19440 TGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTT 19499
||| || | || ||||| || || ||||||||| |||||| |||||||||| |
Sbjct 733939 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCT 733998
Query 19500 GGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATT 19559
||||||||||||||| || || || ||||| | || | || | ||||| ||||| ||
Sbjct 733999 GGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTT 734058
Query 19560 CAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGA 19619
|||| | ||||| || || || ||||| || | |||| | | |||||||| ||| |
Sbjct 734059 CAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAA 734118
Query 19620 TACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAA 19679
||| |||||||| ||| | |||||||||||||| || | || || ||||| ||||||||
Sbjct 734119 TACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 734178
Query 19680 TGCTCATAACTTCCCACTTGA 19700
||||||||||||||| || ||
Sbjct 734179 TGCTCATAACTTCCCTCTAGA 734199
Score = 273 bits (302), Expect = 6e-69
Identities = 314/420 (75%), Gaps = 2/420 (0%)
Strand=Plus/Plus
Query 19282 GCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCG 19341
|||||||| |||||||| || ||||| ||||| ||||| ||||| | || || || |
Sbjct 732403 GCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAA 732461
Query 19342 CTTGTGC-GTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGA 19400
||| | | ||||| || ||| | |||| || | || |||| || || |||||
Sbjct 732462 TTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTCAAGA 732521
Query 19401 AGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTA 19460
||||| |||||||| || || |||||||| || |||||||| || | || ||||| ||
Sbjct 732522 GGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATA 732581
Query 19461 CGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGG 19520
|| ||||||||| |||||| |||||||||| |||||||||||||||| || ||
Sbjct 732582 TGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGG 732641
Query 19521 CATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTT 19580
|| ||||| | || | || | ||||| ||||| |||||| | ||||| || || ||
Sbjct 732642 TATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTT 732701
Query 19581 TAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAA 19640
||||| || | |||| | | |||||||| ||| |||| |||||||| ||| | ||
Sbjct 732702 CAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAA 732761
Query 19641 TCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700
|||||||||||| || | || || ||||| ||||||||||||||||||||||| || ||
Sbjct 732762 TCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 732821
>seq17466
Length=9900
Score = 398 bits (440), Expect = 2e-106
Identities = 430/566 (76%), Gaps = 8/566 (1%)
Strand=Plus/Plus
Query 19139 CTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGG---TTCCTTTAGCGACGCTATGCCTT 19195
|||| || ||| | | ||||| |||||||||| || || | || | ||||||||
Sbjct 9176 CTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCT---GATGGTATGCCTT 9232
Query 19196 TGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCA 19255
| || || |||||| ||||||| ||| ||||||||||||| || || |||||||| |
Sbjct 9233 TAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTA 9292
Query 19256 TGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGA 19315
|||| || || |||||| | ||||| |||||||| |||||||| || ||||| ||||| |
Sbjct 9293 TGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTA 9352
Query 19316 TGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAGAGGTATCTCAG 19374
|||| ||||| | || || || | | ||| | | ||||| |||||| | | |||
Sbjct 9353 TGCATGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCT 9411
Query 19375 AACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGG 19434
|| | || ||||| ||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct 9412 AATGAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGT 9471
Query 19435 TATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTC 19494
||||||||||| | || ||||| || || |||||||| |||||| |||| |||
Sbjct 9472 TATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTC 9531
Query 19495 TTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATG 19554
|| ||||||||||||||||| || || || ||||| | || | || | || || |||
Sbjct 9532 TTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATG 9591
Query 19555 GCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTC 19614
||||||||| | ||||| || || || ||||| || | |||| | | ||||| ||
Sbjct 9592 GCATTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTT 9651
Query 19615 ATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAA 19674
||| ||||||||||||| || |||| |||||||| || || | || ||||||||||||
Sbjct 9652 ATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAA 9711
Query 19675 CGTAATGCTCATAACTTCCCACTTGA 19700
||||||||||| |||||||| || ||
Sbjct 9712 CGTAATGCTCACAACTTCCCTCTAGA 9737
Score = 172 bits (190), Expect = 2e-38
Identities = 252/349 (72%), Gaps = 8/349 (2%)
Strand=Plus/Plus
Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790
||||| |||| || || || ||||||||||| ||||| ||||| || ||||||| |
Sbjct 8825 ACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCC 8884
Query 18791 CGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGT 18848
| | || ||| | || ||| | || || ||||| |||||||| ||||| ||||| ||
Sbjct 8885 C-TACCTTATTGACCGCAACT-TCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGT 8942
Query 18849 AGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCAT 18908
||| |||||||| || || ||||||||| | || | | |||||||||||||| || ||
Sbjct 8943 AGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 9002
Query 18909 ATCGGGAGCCGTCGTTCCGA--GCAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 18966
|| || || | |||| | | || || |||||| | || || ||||||||||||
Sbjct 9003 TTCTGGTGCTATTATTCCTACTTCTGC--GGCGATCGGATTGCATTTTTACCCAATTTGG 9060
Query 18967 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19026
|||||| || ||||||||||| | ||||| || || || | | || | || |
Sbjct 9061 GAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTA 9120
Query 19027 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTA 19075
|||||| | |||| || | ||| ||||| || |||||||||||||
Sbjct 9121 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTA 9169
>seq14178
Length=3042336
Score = 197 bits (218), Expect = 4e-46
Identities = 284/396 (72%), Gaps = 16/396 (4%)
Strand=Plus/Minus
Query 19309 AGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAGAGGT 19367
||||| ||||| ||||| | |||| || | ||| | | ||||| || || | |
Sbjct 2899486 AGTGCTATGCATGGTTCCTTGGTTAACCTCTAGTTTGATCAGGGAAACCACATAAAATGA 2899427
Query 19368 ATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGC 19427
|||| || | || |||| || || ||||| ||||| |||||||| || || |||||
Sbjct 2899426 ATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGC 2899367
Query 19428 TCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCT 19487
| | || |||||||| | | || ||||| || || |||||||| |||||| |
Sbjct 2899366 TTACGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTT 2899307
Query 19488 ACATTTCTTTTTGGCTGCTTGG-CCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTA- 19545
||||||||| ||||||||||| ||||| || || || ||||| | || || |||||
Sbjct 2899306 ACATTTCTTCCTGGCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGC--TTTGGGTAT 2899249
Query 19546 -AGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAA 19604
||||| || || | |||| | ||||| || || || ||||| || | |||
Sbjct 2899248 TAGCACTATAGCTTGCAACCTAAATGGTTTCAATTTCAACCAATCTAT---------CAA 2899198
Query 19605 TGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGT 19664
|||||||| ||| |||| |||||||| ||| | ||||||||||||||||| || ||
Sbjct 2899197 -GGTCGTGTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGT 2899139
Query 19665 AATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700
||||| |||||||| | |||||||||||| || ||
Sbjct 2899138 TATGCATGAACGTAAAGGTCATAACTTCCCTCTAGA 2899103
>seq3005
Length=2476929
Score = 100 bits (110), Expect = 8e-17
Identities = 214/317 (68%), Gaps = 21/317 (7%)
Strand=Plus/Minus
Query 19207 GGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTC 19266
||||| ||||||| || |||||||| ||| || || | |||||| |||| | |||
Sbjct 2014311 GGTACTTTCAACTTCACTACTGTATTCCGGGCCGAGCACAGCATCCTTGTGCATTCATTC 2014252
Query 19267 CACATGCTC-------GGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCA 19319
||||| | || | ||||||||||| ||||| || |||| |||
Sbjct 2014251 CACATTTTATGACTAAGGCTTAGCTGGTGTGTTTGGCGGTTCCCTAT----------GCA 2014202
Query 19320 CGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACT 19378
||||| | || || || | | ||| | || ||||| || ||| | | ||||| ||
Sbjct 2014201 CGGTTACTTGGTAACCTC-TAGTTTGATCCGGGAAACCACAGAAAATGAATCTCCCAAGG 2014143
Query 19379 ATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438
| | |||| ||||| | ||| ||||| ||||| | ||||| |||||||||| ||||
Sbjct 2014142 AAAGATACAGATTTGGTCCAGAGGAAGAAACTTAAGATATTGTAGCTGCTCATGTTTATT 2014083
Query 19439 TTGGTCGGCTTATTTTCCAG-TACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTT 19497
|||| | | || | | | || || |||| |||| | |||| |||||||||||
Sbjct 2014082 TTGGCTGATTGATACTTCTGATATGCTGGTTTCAGCAATTCTCATTCT-TACATTTCTTT 2014024
Query 19498 TTGGCTGCTTGGCCTGT 19514
| | ||||||| ||||
Sbjct 2014023 GTAGATGCTTGGACTGT 2014007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141105890764800
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