Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq22333 600 3e-167 seq17466 398 2e-106 seq14178 197 4e-46 seq3005 100 8e-17 >seq22333 Length=1412734 Score = 600 bits (664), Expect = 3e-167 Identities = 726/981 (74%), Gaps = 8/981 (1%) Strand=Plus/Plus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || ||| ||||| |||| || || || ||||| ||||| || || |||||||| || Sbjct 733223 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 733282 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACC 18842 ||||| || | | | | || ||| | ||| || ||||| |||||||||||||| || Sbjct 733283 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 733341 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 ||| ||||| ||||| || || || || |||||| | || ||| |||||||||||||| Sbjct 733342 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 733401 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCA 18960 || || || || || | |||| | | ||| || ||||| | || || ||||| Sbjct 733402 TATTATTTCTGGTGCGATTATTCCTACTTCTGCA--GCTATCGGTTTGCATTTTTACCCG 733459 Query 18961 ATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTG 19020 || |||||||| || ||||||||||| | ||||| || || || | | || | Sbjct 733460 ATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATT 733519 Query 19021 GTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTAT 19080 || | |||||| | |||| || | ||||||||| || |||||||||||||| | Sbjct 733520 GTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTC 733579 Query 19081 CGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCT 19140 || || || ||||| ||||||||| |||||| || |||||||||||||| ||||| || Sbjct 733580 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCT 733639 Query 19141 GCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGT 19200 || || ||| | |||| ||| | |||||||| ||| || | ||||||| | || Sbjct 733640 GCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGA 733699 Query 19201 ATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCAC 19260 || |||||| ||||||| |||| |||||||||||||||| || |||||||| |||||| Sbjct 733700 ATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCAC 733759 Query 19261 CCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCAC 19320 || ||||||||| | || || |||||||| |||||||| || ||||| ||||| ||||| Sbjct 733760 CCATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 733819 Query 19321 GGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTA 19379 ||||| |||| || || | ||| | | ||||| || ||| | | |||| || | Sbjct 733820 GGTTC-CTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 733878 Query 19380 TGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTT 19439 || |||| || || ||||| ||||| |||||||| || || |||||||| || ||||| Sbjct 733879 AGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTT 733938 Query 19440 TGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTT 19499 ||| || | || ||||| || || ||||||||| |||||| |||||||||| | Sbjct 733939 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCT 733998 Query 19500 GGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATT 19559 ||||||||||||||| || || || ||||| | || | || | ||||| ||||| || Sbjct 733999 GGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTT 734058 Query 19560 CAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGA 19619 |||| | ||||| || || || ||||| || | |||| | | |||||||| ||| | Sbjct 734059 CAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAA 734118 Query 19620 TACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAA 19679 ||| |||||||| ||| | |||||||||||||| || | || || ||||| |||||||| Sbjct 734119 TACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 734178 Query 19680 TGCTCATAACTTCCCACTTGA 19700 ||||||||||||||| || || Sbjct 734179 TGCTCATAACTTCCCTCTAGA 734199 Score = 273 bits (302), Expect = 6e-69 Identities = 314/420 (75%), Gaps = 2/420 (0%) Strand=Plus/Plus Query 19282 GCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCG 19341 |||||||| |||||||| || ||||| ||||| ||||| ||||| | || || || | Sbjct 732403 GCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAA 732461 Query 19342 CTTGTGC-GTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGA 19400 ||| | | ||||| || ||| | |||| || | || |||| || || ||||| Sbjct 732462 TTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTCAAGA 732521 Query 19401 AGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTA 19460 ||||| |||||||| || || |||||||| || |||||||| || | || ||||| || Sbjct 732522 GGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATA 732581 Query 19461 CGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGG 19520 || ||||||||| |||||| |||||||||| |||||||||||||||| || || Sbjct 732582 TGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGG 732641 Query 19521 CATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTT 19580 || ||||| | || | || | ||||| ||||| |||||| | ||||| || || || Sbjct 732642 TATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTT 732701 Query 19581 TAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAA 19640 ||||| || | |||| | | |||||||| ||| |||| |||||||| ||| | || Sbjct 732702 CAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAA 732761 Query 19641 TCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700 |||||||||||| || | || || ||||| ||||||||||||||||||||||| || || Sbjct 732762 TCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 732821 >seq17466 Length=9900 Score = 398 bits (440), Expect = 2e-106 Identities = 430/566 (76%), Gaps = 8/566 (1%) Strand=Plus/Plus Query 19139 CTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGG---TTCCTTTAGCGACGCTATGCCTT 19195 |||| || ||| | | ||||| |||||||||| || || | || | |||||||| Sbjct 9176 CTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCT---GATGGTATGCCTT 9232 Query 19196 TGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCA 19255 | || || |||||| ||||||| ||| ||||||||||||| || || |||||||| | Sbjct 9233 TAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTA 9292 Query 19256 TGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGA 19315 |||| || || |||||| | ||||| |||||||| |||||||| || ||||| ||||| | Sbjct 9293 TGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTA 9352 Query 19316 TGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAGAGGTATCTCAG 19374 |||| ||||| | || || || | | ||| | | ||||| |||||| | | ||| Sbjct 9353 TGCATGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCT 9411 Query 19375 AACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGG 19434 || | || ||||| ||||| |||||||||||||||||||||||||| |||||||| || Sbjct 9412 AATGAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGT 9471 Query 19435 TATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTC 19494 ||||||||||| | || ||||| || || |||||||| |||||| |||| ||| Sbjct 9472 TATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTC 9531 Query 19495 TTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATG 19554 || ||||||||||||||||| || || || ||||| | || | || | || || ||| Sbjct 9532 TTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATG 9591 Query 19555 GCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTC 19614 ||||||||| | ||||| || || || ||||| || | |||| | | ||||| || Sbjct 9592 GCATTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTT 9651 Query 19615 ATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAA 19674 ||| ||||||||||||| || |||| |||||||| || || | || |||||||||||| Sbjct 9652 ATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAA 9711 Query 19675 CGTAATGCTCATAACTTCCCACTTGA 19700 ||||||||||| |||||||| || || Sbjct 9712 CGTAATGCTCACAACTTCCCTCTAGA 9737 Score = 172 bits (190), Expect = 2e-38 Identities = 252/349 (72%), Gaps = 8/349 (2%) Strand=Plus/Plus Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790 ||||| |||| || || || ||||||||||| ||||| ||||| || ||||||| | Sbjct 8825 ACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCC 8884 Query 18791 CGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGT 18848 | | || ||| | || ||| | || || ||||| |||||||| ||||| ||||| || Sbjct 8885 C-TACCTTATTGACCGCAACT-TCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGT 8942 Query 18849 AGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCAT 18908 ||| |||||||| || || ||||||||| | || | | |||||||||||||| || || Sbjct 8943 AGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 9002 Query 18909 ATCGGGAGCCGTCGTTCCGA--GCAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 18966 || || || | |||| | | || || |||||| | || || |||||||||||| Sbjct 9003 TTCTGGTGCTATTATTCCTACTTCTGC--GGCGATCGGATTGCATTTTTACCCAATTTGG 9060 Query 18967 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19026 |||||| || ||||||||||| | ||||| || || || | | || | || | Sbjct 9061 GAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTA 9120 Query 19027 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTA 19075 |||||| | |||| || | ||| ||||| || ||||||||||||| Sbjct 9121 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTA 9169 >seq14178 Length=3042336 Score = 197 bits (218), Expect = 4e-46 Identities = 284/396 (72%), Gaps = 16/396 (4%) Strand=Plus/Minus Query 19309 AGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAGAGGT 19367 ||||| ||||| ||||| | |||| || | ||| | | ||||| || || | | Sbjct 2899486 AGTGCTATGCATGGTTCCTTGGTTAACCTCTAGTTTGATCAGGGAAACCACATAAAATGA 2899427 Query 19368 ATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGC 19427 |||| || | || |||| || || ||||| ||||| |||||||| || || ||||| Sbjct 2899426 ATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGC 2899367 Query 19428 TCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCT 19487 | | || |||||||| | | || ||||| || || |||||||| |||||| | Sbjct 2899366 TTACGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTT 2899307 Query 19488 ACATTTCTTTTTGGCTGCTTGG-CCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTA- 19545 ||||||||| ||||||||||| ||||| || || || ||||| | || || ||||| Sbjct 2899306 ACATTTCTTCCTGGCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGC--TTTGGGTAT 2899249 Query 19546 -AGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAA 19604 ||||| || || | |||| | ||||| || || || ||||| || | ||| Sbjct 2899248 TAGCACTATAGCTTGCAACCTAAATGGTTTCAATTTCAACCAATCTAT---------CAA 2899198 Query 19605 TGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGT 19664 |||||||| ||| |||| |||||||| ||| | ||||||||||||||||| || || Sbjct 2899197 -GGTCGTGTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGT 2899139 Query 19665 AATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700 ||||| |||||||| | |||||||||||| || || Sbjct 2899138 TATGCATGAACGTAAAGGTCATAACTTCCCTCTAGA 2899103 >seq3005 Length=2476929 Score = 100 bits (110), Expect = 8e-17 Identities = 214/317 (68%), Gaps = 21/317 (7%) Strand=Plus/Minus Query 19207 GGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTC 19266 ||||| ||||||| || |||||||| ||| || || | |||||| |||| | ||| Sbjct 2014311 GGTACTTTCAACTTCACTACTGTATTCCGGGCCGAGCACAGCATCCTTGTGCATTCATTC 2014252 Query 19267 CACATGCTC-------GGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCA 19319 ||||| | || | ||||||||||| ||||| || |||| ||| Sbjct 2014251 CACATTTTATGACTAAGGCTTAGCTGGTGTGTTTGGCGGTTCCCTAT----------GCA 2014202 Query 19320 CGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACT 19378 ||||| | || || || | | ||| | || ||||| || ||| | | ||||| || Sbjct 2014201 CGGTTACTTGGTAACCTC-TAGTTTGATCCGGGAAACCACAGAAAATGAATCTCCCAAGG 2014143 Query 19379 ATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438 | | |||| ||||| | ||| ||||| ||||| | ||||| |||||||||| |||| Sbjct 2014142 AAAGATACAGATTTGGTCCAGAGGAAGAAACTTAAGATATTGTAGCTGCTCATGTTTATT 2014083 Query 19439 TTGGTCGGCTTATTTTCCAG-TACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTT 19497 |||| | | || | | | || || |||| |||| | |||| ||||||||||| Sbjct 2014082 TTGGCTGATTGATACTTCTGATATGCTGGTTTCAGCAATTCTCATTCT-TACATTTCTTT 2014024 Query 19498 TTGGCTGCTTGGCCTGT 19514 | | ||||||| |||| Sbjct 2014023 GTAGATGCTTGGACTGT 2014007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141105890764800