Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq20901 111 1e-19 seq5785 89.7 5e-13 seq4300 82.4 7e-11 >seq20901 Length=225483 Score = 111 bits (122), Expect = 1e-19 Identities = 344/520 (66%), Gaps = 22/520 (4%) Strand=Plus/Minus Query 46758 GTGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCC 46817 ||||| |||||| || ||||||| | |||||| | || |||||||| || | | Sbjct 70834 GTGCCGTGCGTTGCCAGAAAGGCCGATTGGGCCCTAAATTGGATCGACGGCTCG---GAG 70778 Query 46818 ACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGT 46877 || | || ||| | || | || || || || ||||| | ||||| ||||||||| Sbjct 70777 ACATTCGCGGAGAGACTGATAGCGTTTGCTTGCGTGGAAGGGATATTTTTCTCGGGCAGT 70718 Query 46878 TTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAAC 46937 || ||| || |||| | |||| || |||||||||| || || ||| ||| Sbjct 70717 TTCTGCGCGATATTTTGGTTAAAAAAGCGCGGGTTAATGCCGGGGCTAACCTTCTCAAAC 70658 Query 46938 GAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAGACG 46997 ||| | |||||||| ||||||||||| ||| || || ||||| | | |||| | Sbjct 70657 GAGCTAATCTCGCGAGACGAAGGACTCCACTGCGATTTCGCGTGCTTGTTGTACAGCTTG 70598 Query 46998 CGCGTGAATGAGAAATTAAACTCGGA-CACGATCCTGAGCATGTTTAGGGAGGCGGTGAG 47056 | ||| | ||||||| | ||| | || | | | || | | |||||||||| Sbjct 70597 C---TGAGGAACAAATTAAGCGAGGAGCGCG-TGAAGGGGATAGTGAAGGAGGCGGTGGA 70542 Query 47057 CATCGAAAAGGAGTTTTTTACTGCG--GCGCTGCCCGTCGCCTTGCTGGGCATGAACGCA 47114 || || | |||||| | |||| |||||||| ||| ||| |||| ||||||| Sbjct 70541 GATAGAGAGGGAGTTCGT--GTGCGACGCGCTGCCGTGCGCATTGGTGGGGATGAACGGG 70484 Query 47115 CAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTT-GGTGCAGCTCGGACA 47173 || ||| | | || || ||||||||||| ||| | |||| ||||| ||| || Sbjct 70483 GCGTTGATGAGTCAGTACATAGAGTTTGTGGCAGATAGGTTGTTGGGTGC-GCT-GGGGT 70426 Query 47174 ACCGAAATATTTTAATGCT----CGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCG 47229 | | || | | | | | || ||||||||||| | ||| | |||||||| Sbjct 70425 GCGGGAAGGTGT--ACGGTGTGACG-AATCCGTTTGATTGGATGGAGTTGATTTCGCTTC 70369 Query 47230 AGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 | || || || ||||| || ||||| ||||||| || || Sbjct 70368 AAGGGAAGACGAATTTCTTTGAGAAGAGAGTCGGGGAATA 70329 >seq5785 Length=266748 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || ||||||||||||||| | |||||| |||||| Sbjct 167364 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTACGACCATCTTCT 167423 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| ||||| | | |||| || | ||| || || || || |||||||| || || | Sbjct 167424 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCTTGA 167483 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || ||| | | || | |||||| | ||| ||||| | || | || || Sbjct 167484 ATCTTAGCTTTAACATTGTCAATAGTATCCGAACTCTCAACTTCTAAGGTAATGGTCTTG 167543 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| || | || || ||||| Sbjct 167544 CCAGTAAGAGTCTTAACAAAGATTTGCAT 167572 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || |||||||||||||| | |||||| |||||| Sbjct 166091 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTACGACCATCTTCT 166150 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| ||||| | | |||| || | ||| || || || || |||||||| || || | Sbjct 166151 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCTTGA 166210 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || ||| | | || | |||||| | ||| ||||| | || | || || Sbjct 166211 ATCTTAGCTTTAACATTGTCAATAGTATCCGAACTCTCAACTTCTAAGGTAATGGTCTTG 166270 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| || | || || ||||| Sbjct 166271 CCAGTAAGAGTCTTAACAAAGATTTGCAT 166299 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | || || || |||||||||||||| | |||||| |||||| Sbjct 166319 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCAAGGGTACGACCATCTTCT 166378 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || || | | | || || | ||| || || || || ||||| || ||||| | Sbjct 166379 AGCTGCTTTCCAGCAAAAATCAGTCTCTGCTGGTCAGGTGGGATGCCCTCCTTATCCTGA 166438 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | || | ||||| | ||| ||||| | || | |||||| Sbjct 166439 ATTTTAGCCTTGACATTGTCAATTGTATCAGAACTCTCAACTTCCAAGGTGATAGTTTTA 166498 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| |||||||| | || |||||||| Sbjct 166499 CCAGTGAGAGTTTTCACAAAGATCTGCAT 166527 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | || || || |||||||||||||| | |||||| |||||| Sbjct 167592 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCAAGGGTACGACCATCTTCT 167651 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || || | | | || || | ||| || || || || ||||| || ||||| | Sbjct 167652 AGCTGCTTTCCAGCAAAAATCAGTCTCTGCTGGTCAGGTGGGATGCCCTCCTTATCCTGA 167711 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | || | ||||| | ||| ||||| | || | |||||| Sbjct 167712 ATTTTAGCCTTGACATTGTCAATTGTATCAGAACTCTCAACTTCCAAGGTGATAGTTTTA 167771 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| |||||||| | || |||||||| Sbjct 167772 CCAGTGAGAGTTTTCACAAAGATCTGCAT 167800 >seq4300 Length=903212 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||| ||| | | | ||||||||||| |||||||| ||| || ||| || |||||| Sbjct 818144 ACCAGATGGAGGGTGGACTCTTTTTGGATGTTGTAATCGGCCAAGGTGCGGCCGTCTTCG 818085 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || || || |||| |||| || | ||| || || ||||| || ||||| || || Sbjct 818084 AGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGG 818025 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || |||| | || | || |||| ||| || |||| || | ||| || Sbjct 818024 ATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTCTCGACCTCGAGGGTAATCGTCTTC 817965 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || || ||||| | ||| ||||||||| Sbjct 817964 CCGGTTAGGGTTTTGACGAAGATCTGCATG 817935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476458684416000