Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq4300 87.8 2e-12
>seq4300
Length=903212
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| ||||| | || || ||||| ||||||| ||| | ||||| ||||||| ||
Sbjct 755441 CAATATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACAATCACTCTCGAAGTGGAGAG 755500
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
| || || ||||| | || || || || || || ||||| || || || ||
Sbjct 755501 CTCTGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGA 755560
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|||||| | || || | || ||| || ||||||||||||| | | | ||||||
Sbjct 755561 TCAGCAGCGTCTTATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTA 755620
Query 25351 CAATATTCAAAAAGAATCCACCATTCAT 25378
||| || ||||||||||||||| | |||
Sbjct 755621 CAACATCCAAAAAGAATCCACCTTGCAT 755648
Score = 86.0 bits (94), Expect = 6e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231
|| ||||| | ||||| ||||| | ||||| || | ||||| ||||||| || |
Sbjct 850355 AAGATGCAGATATTTGTGAAAACCCTCACCGGCAAGACAATCACCCTCGAAGTGGAGAGC 850414
Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291
||| || ||||| | || || || || || || ||||| || ||||| ||
Sbjct 850415 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGAC 850474
Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351
||||| | ||||| | | ||| || ||||||||||| | | | | | |||||||
Sbjct 850475 CAGCAGCGTCTCATCTTTGCCGGGAAGCAACTCGAAGACGGCCGCACTTTGGCCGATTAC 850534
Query 25352 AATATTCAAAAAGAATCCAC 25371
|| |||||||||||||||||
Sbjct 850535 AACATTCAAAAAGAATCCAC 850554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444951969792000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |