Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq5785 87.8 1e-12 >seq5785 Length=266748 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAA--ACAGAACCCG 106317 |||||||| |||||||| || | |||||||||||||||||| | ||| ||| || Sbjct 167572 ATGCAAATCTTTGTTAAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCG 167513 Query 106318 GCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATC 106377 ||| || ||| | | || ||| || ||| ||||| |||||| | || ||| | Sbjct 167512 --GATACTATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCCGCCTGACC 167455 Query 106378 AACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACA 106437 | || |||||||| | ||| || || || |||||||| | || | | ||| |||| Sbjct 167454 AGCAGAGGCTTATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGTACCCTTGCCGACTACA 167395 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGT 106468 |||| || || || || || || || || || Sbjct 167394 ACATTCAGAAGGAGTCCACCCTTCACTTGGT 167364 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAA--ACAGAACCCG 106317 |||||||| |||||||| || | |||||||||||||||||| | ||| ||| || Sbjct 166299 ATGCAAATCTTTGTTAAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCG 166240 Query 106318 GCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATC 106377 ||| || ||| | | || ||| || ||| ||||| |||||| | || ||| | Sbjct 166239 --GATACTATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCCGCCTGACC 166182 Query 106378 AACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACA 106437 | || |||||||| | ||| || || || |||||||| | || | | || |||| Sbjct 166181 AGCAGAGGCTTATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGTACCCTTGCTGACTACA 166122 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGT 106468 |||| || || || || || || || || || Sbjct 166121 ACATTCAGAAGGAGTCCACCCTTCACTTGGT 166091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402204073164800