Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq5785 87.8 1e-12
>seq5785
Length=266748
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAA--ACAGAACCCG 106317
|||||||| |||||||| || | |||||||||||||||||| | ||| ||| ||
Sbjct 167572 ATGCAAATCTTTGTTAAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCG 167513
Query 106318 GCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATC 106377
||| || ||| | | || ||| || ||| ||||| |||||| | || ||| |
Sbjct 167512 --GATACTATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCCGCCTGACC 167455
Query 106378 AACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACA 106437
| || |||||||| | ||| || || || |||||||| | || | | ||| ||||
Sbjct 167454 AGCAGAGGCTTATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGTACCCTTGCCGACTACA 167395
Query 106438 ACATACAAAAAGAATCTACACTACATTTAGT 106468
|||| || || || || || || || || ||
Sbjct 167394 ACATTCAGAAGGAGTCCACCCTTCACTTGGT 167364
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/211 (69%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAA--ACAGAACCCG 106317
|||||||| |||||||| || | |||||||||||||||||| | ||| ||| ||
Sbjct 166299 ATGCAAATCTTTGTTAAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCG 166240
Query 106318 GCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATC 106377
||| || ||| | | || ||| || ||| ||||| |||||| | || ||| |
Sbjct 166239 --GATACTATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCCGCCTGACC 166182
Query 106378 AACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACA 106437
| || |||||||| | ||| || || || |||||||| | || | | || ||||
Sbjct 166181 AGCAGAGGCTTATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGTACCCTTGCTGACTACA 166122
Query 106438 ACATACAAAAAGAATCTACACTACATTTAGT 106468
|||| || || || || || || || || ||
Sbjct 166121 ACATTCAGAAGGAGTCCACCCTTCACTTGGT 166091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402204073164800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |