Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_027130.1
Length=172688
Score E
Sequences producing significant alignments: (Bits) Value
seq22333 610 7e-170
seq17466 567 8e-157
seq14178 217 2e-51
>seq22333
Length=1412734
Score = 610 bits (676), Expect = 7e-170
Identities = 732/989 (74%), Gaps = 4/989 (0%)
Strand=Plus/Plus
Query 158379 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 158438
||||| | ||| ||||| || | |||||||| || | |||||||| || || ||
Sbjct 733223 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 733282
Query 158439 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 158497
||||| || ||| | ||| | ||||| ||||| || || |||||||| | ||||||||
Sbjct 733283 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 733341
Query 158498 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 158557
|| || || || ||||| || |||||||| || |||| || || | ||||| |||||
Sbjct 733342 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 733401
Query 158558 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 158617
|| || |||||||| || | || |||| || || ||| | || || || || ||
Sbjct 733402 TATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATCGGTTTGCATTTTTACCCGAT 733461
Query 158618 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 158677
|||||||| ||||| ||||||| ||| | || || || ||||||| | || | ||
Sbjct 733462 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 733521
Query 158678 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATACCG 158737
| |||||| | | || | | || ||||| ||||| ||||||||| | |||
Sbjct 733522 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 733581
Query 158738 CTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTCGCTGCAGCATCTGC 158797
| |||||||| || ||||| ||| |||||||| || || || || ||||| ||||
Sbjct 733582 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCTGC 733641
Query 158798 TGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 158857
||| ||| | |||| || |||||||||| ||| || |||| ||||||||| || ||
Sbjct 733642 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 733701
Query 158858 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 158917
|||||||||||| |||| |||| |||||||||| || || ||||||||||||||||||||
Sbjct 733702 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 733761
Query 158918 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 158977
||||| ||| | || || ||||| |||||||| || || || ||| ||||||||||||
Sbjct 733762 ATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 733821
Query 158978 AAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTATG 159036
| || || || | | | || | ||||| || |||| || || || | |
Sbjct 733822 TTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 733880
Query 159037 GTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTCG 159096
|||||| ||||| ||||| |||||||| ||||||||||| || || || ||||| || |
Sbjct 733881 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTG 733940
Query 159097 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 159156
| || |||||||||||||| ||| |||||||| || ||||| || || |||||||| |
Sbjct 733941 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGG 734000
Query 159157 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCA 159216
|||| |||||||| || || ||||||||||| || | || | || ||||| ||||
Sbjct 734001 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCA 734060
Query 159217 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 159276
|||| || |||||||| |||||||| || | ||||| |||| |||||||| | || |
Sbjct 734061 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 734120
Query 159277 CCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACG 159336
||||||| ||| | | || ||||| || |||||||||||||||||||| ||||| |
Sbjct 734121 CCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 734180
Query 159337 CACACAACTTCCCACTCGACCTTGCTGCT 159365
| || |||||||| || ||||| ||||||
Sbjct 734181 CTCATAACTTCCCTCTAGACCTAGCTGCT 734209
Score = 291 bits (322), Expect = 9e-74
Identities = 328/435 (75%), Gaps = 3/435 (1%)
Strand=Plus/Plus
Query 158933 TGTT-GCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTT 158991
|||| ||||| |||||||| || || || ||| |||||||||||| | || || |
Sbjct 732398 TGTTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCT 732457
Query 158992 CCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGA 159050
| | | | | || | ||||| || |||| | || || | ||||||| |||||
Sbjct 732458 C-TAATTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGT 732516
Query 159051 CAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTC 159110
||||| |||||||| ||||||||||| || || || ||||| || || || |||||||||
Sbjct 732517 CAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTC 732576
Query 159111 CAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTT 159170
||||| ||| |||||||| || ||||| || || |||||||| ||||| ||||||||
Sbjct 732577 CAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTA 732636
Query 159171 GTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTC 159230
|| || ||||||||||| || | || | || ||||| |||||||| || ||||||
Sbjct 732637 GTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTC 732696
Query 159231 AACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTA 159290
|| |||||||| || | ||||| |||| |||||||| | || |||||||| ||| |
Sbjct 732697 AATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATT 732756
Query 159291 CTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCA 159350
| || ||||| || |||||||||||||||||||| ||||| || || ||||||||
Sbjct 732757 ATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCT 732816
Query 159351 CTCGACCTTGCTGCT 159365
|| ||||| ||||||
Sbjct 732817 CTAGACCTAGCTGCT 732831
>seq17466
Length=9900
Score = 567 bits (628), Expect = 8e-157
Identities = 742/1021 (73%), Gaps = 6/1021 (1%)
Strand=Plus/Minus
Query 159899 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 159958
||||| || | ||||||||| | | |||| |||||||||||||| || ||||| ||
Sbjct 1111 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 1052
Query 159959 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGAACAACTTTC 160018
|| | || |||| ||||||| | ||| | || |||||| |||| || || |||||
Sbjct 1051 CTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTT 992
Query 160019 GCAACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGGT-GCAAACTTTCT 160077
| ||| ||||||||||||||| | |||||||||||| | || ||| |||| |||||
Sbjct 991 GTAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCT 934
Query 160078 TA-CAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGG 160136
|| | ||| | ||| |||||| || | | | | || ||| | | || || ||||
Sbjct 933 TAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGG 874
Query 160137 GTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTTG 160196
| || || || || |||||||| | ||| ||| | || || || |||| |||||
Sbjct 873 GCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTG 814
Query 160197 TGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCAC 160256
| || |||||||| || || || ||||| || |||||| | ||||| |||||||| || |
Sbjct 813 TCGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTC 754
Query 160257 G-TCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTCTTT 160315
| ||| || | | || ||||| ||||| ||| | ||||||||||| || || || |||
Sbjct 753 GGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTT 695
Query 160316 GTCAGCGTATTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTT 160375
|| ||||||||| || || ||| |||| || || ||||||| || || ||| |||
Sbjct 694 GTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTT 635
Query 160376 GGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGCTT 160435
|| || ||||| || ||| |||| | | ||| | ||||||||||| || |||||| |
Sbjct 634 GGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTG 575
Query 160436 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCCATC 160495
||||| || ||||||||||||||||| || || |||| | ||| ||||| | || |||
Sbjct 574 AACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATC 515
Query 160496 CATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAG 160555
||||| | ||| ||||| ||||| || | |||||||| || |||||||||||
Sbjct 514 CATGGGGCTACCGTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGC 455
Query 160556 GCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 160615
|| ||| | | || || | ||||| |||||||| ||||||||||| |||||||| |||
Sbjct 454 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGG 395
Query 160616 TCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTT 160675
|| || ||||| ||| |||| ||||| || || || ||| | ||||| || ||| | |||
Sbjct 394 TCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTT 335
Query 160676 GTGCCTGTTATGGGTCTTTGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTT 160735
|| || || | ||| | |||| ||||||| | |||| || ||||| || ||
Sbjct 334 GTACCCGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTA 275
Query 160736 CGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCAGAATTTGAGACC 160795
||||| || || ||||| || || || | ||||| |||||||| |||||||||||
Sbjct 274 CGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACT 215
Query 160796 TTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTGCATGGTTAGCACCTGCCGAC 160855
||||||||||| || || || | || || || | ||||| ||| | ||| || ||
Sbjct 214 TTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGAT 155
Query 160856 CAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAA 160915
|| || ||||| || |||| ||||| || || ||||| || | || ||||| ||||||
Sbjct 154 CAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 95
Query 160916 T 160916
|
Sbjct 94 T 94
Score = 414 bits (458), Expect = 1e-110
Identities = 437/573 (76%), Gaps = 2/573 (0%)
Strand=Plus/Plus
Query 158794 CTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTG 158853
||||||| ||| | | |||||| | |||||||| |||||| |||| ||||||| | |
Sbjct 9176 CTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAG 9235
Query 158854 GTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGC 158913
| || ||||||||||| |||| ||| |||||||||| || || ||||||||||||||||
Sbjct 9236 GAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGC 9295
Query 158914 ACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGC 158973
| || || || ||| | ||||| ||||| |||||||| || || || ||| ||||||||
Sbjct 9296 ATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGC 9355
Query 158974 ATGGAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAAC 159032
|||| | || || || | | | || | ||||| ||||||| ||||| ||
Sbjct 9356 ATGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAAT 9414
Query 159033 TATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTAC 159092
| |||||||| || || ||||||||||| || ||||| || || || || || |||||
Sbjct 9415 GAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTAT 9474
Query 159093 TTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTC 159152
|| ||||| || ||||||||||| ||| ||||||||||| ||||| || |||||||||
Sbjct 9475 TTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTC 9534
Query 159153 CTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCA 159212
| ||||| |||||||| || || ||||||||||| || | || | || ||||||
Sbjct 9535 TTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCA 9594
Query 159213 TTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTG 159272
|||||||| || || ||||| |||||||| || | ||||| |||| ||||| || |
Sbjct 9595 TTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATT 9654
Query 159273 AACACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGT 159332
|| || ||||| ||| | | |||||||| ||| ||||||||||| ||||| || |||
Sbjct 9655 AATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGT 9714
Query 159333 AACGCACACAACTTCCCACTCGACCTTGCTGCT 159365
|| || ||||||||||| || ||||| ||||||
Sbjct 9715 AATGCTCACAACTTCCCTCTAGACCTAGCTGCT 9747
>seq14178
Length=3042336
Score = 217 bits (240), Expect = 2e-51
Identities = 249/333 (75%), Gaps = 15/333 (5%)
Strand=Plus/Minus
Query 159036 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTC 159095
||||||| ||||| ||||| |||||||| ||||||||||| || || | ||||| ||
Sbjct 2899413 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTACGGTTATTTT 2899354
Query 159096 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 159155
|| | |||||||||||||| ||| ||||||| || ||||| || || ||||||||
Sbjct 2899353 GGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTACATTTCTTCCTG 2899294
Query 159156 GCTGCAT-GGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCA 159212
||||| | ||||||| || || ||||||||||| | ||| | || | | || || ||
Sbjct 2899293 GCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTG--CTTTGGGTATTAGCACTATAGCT 2899236
Query 159213 TTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTG 159272
| |||||| || |||||||| |||||||| || | ||| |||||||| |
Sbjct 2899235 TGCAACCTAAATGGTTTCAATTTCAACCAATCTA----------TCAAGGTCGTGTAATT 2899186
Query 159273 AACACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGT 159332
|| |||||||| ||| | | || ||||| || |||| ||||||||||||||| |||
Sbjct 2899185 AATACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATGCATGAACGT 2899126
Query 159333 AACGCACACAACTTCCCACTCGACCTTGCTGCT 159365
|| | || |||||||| || ||||| ||||||
Sbjct 2899125 AAAGGTCATAACTTCCCTCTAGACCTAGCTGCT 2899093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552296808448000
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