Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq22333 610 7e-170 seq17466 567 8e-157 seq14178 217 2e-51 >seq22333 Length=1412734 Score = 610 bits (676), Expect = 7e-170 Identities = 732/989 (74%), Gaps = 4/989 (0%) Strand=Plus/Plus Query 158379 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 158438 ||||| | ||| ||||| || | |||||||| || | |||||||| || || || Sbjct 733223 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 733282 Query 158439 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 158497 ||||| || ||| | ||| | ||||| ||||| || || |||||||| | |||||||| Sbjct 733283 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 733341 Query 158498 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 158557 || || || || ||||| || |||||||| || |||| || || | ||||| ||||| Sbjct 733342 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 733401 Query 158558 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 158617 || || |||||||| || | || |||| || || ||| | || || || || || Sbjct 733402 TATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATCGGTTTGCATTTTTACCCGAT 733461 Query 158618 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 158677 |||||||| ||||| ||||||| ||| | || || || ||||||| | || | || Sbjct 733462 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 733521 Query 158678 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATACCG 158737 | |||||| | | || | | || ||||| ||||| ||||||||| | ||| Sbjct 733522 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 733581 Query 158738 CTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTCGCTGCAGCATCTGC 158797 | |||||||| || ||||| ||| |||||||| || || || || ||||| |||| Sbjct 733582 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGGCTGC 733641 Query 158798 TGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 158857 ||| ||| | |||| || |||||||||| ||| || |||| ||||||||| || || Sbjct 733642 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 733701 Query 158858 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 158917 |||||||||||| |||| |||| |||||||||| || || |||||||||||||||||||| Sbjct 733702 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 733761 Query 158918 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 158977 ||||| ||| | || || ||||| |||||||| || || || ||| |||||||||||| Sbjct 733762 ATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 733821 Query 158978 AAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTATG 159036 | || || || | | | || | ||||| || |||| || || || | | Sbjct 733822 TTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 733880 Query 159037 GTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTCG 159096 |||||| ||||| ||||| |||||||| ||||||||||| || || || ||||| || | Sbjct 733881 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTG 733940 Query 159097 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 159156 | || |||||||||||||| ||| |||||||| || ||||| || || |||||||| | Sbjct 733941 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGG 734000 Query 159157 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCA 159216 |||| |||||||| || || ||||||||||| || | || | || ||||| |||| Sbjct 734001 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCA 734060 Query 159217 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 159276 |||| || |||||||| |||||||| || | ||||| |||| |||||||| | || | Sbjct 734061 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 734120 Query 159277 CCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACG 159336 ||||||| ||| | | || ||||| || |||||||||||||||||||| ||||| | Sbjct 734121 CCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 734180 Query 159337 CACACAACTTCCCACTCGACCTTGCTGCT 159365 | || |||||||| || ||||| |||||| Sbjct 734181 CTCATAACTTCCCTCTAGACCTAGCTGCT 734209 Score = 291 bits (322), Expect = 9e-74 Identities = 328/435 (75%), Gaps = 3/435 (1%) Strand=Plus/Plus Query 158933 TGTT-GCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTT 158991 |||| ||||| |||||||| || || || ||| |||||||||||| | || || | Sbjct 732398 TGTTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCT 732457 Query 158992 CCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGA 159050 | | | | | || | ||||| || |||| | || || | ||||||| ||||| Sbjct 732458 C-TAATTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGT 732516 Query 159051 CAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTC 159110 ||||| |||||||| ||||||||||| || || || ||||| || || || ||||||||| Sbjct 732517 CAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTC 732576 Query 159111 CAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTT 159170 ||||| ||| |||||||| || ||||| || || |||||||| ||||| |||||||| Sbjct 732577 CAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTA 732636 Query 159171 GTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTC 159230 || || ||||||||||| || | || | || ||||| |||||||| || |||||| Sbjct 732637 GTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTC 732696 Query 159231 AACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTA 159290 || |||||||| || | ||||| |||| |||||||| | || |||||||| ||| | Sbjct 732697 AATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATT 732756 Query 159291 CTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCA 159350 | || ||||| || |||||||||||||||||||| ||||| || || |||||||| Sbjct 732757 ATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCT 732816 Query 159351 CTCGACCTTGCTGCT 159365 || ||||| |||||| Sbjct 732817 CTAGACCTAGCTGCT 732831 >seq17466 Length=9900 Score = 567 bits (628), Expect = 8e-157 Identities = 742/1021 (73%), Gaps = 6/1021 (1%) Strand=Plus/Minus Query 159899 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 159958 ||||| || | ||||||||| | | |||| |||||||||||||| || ||||| || Sbjct 1111 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 1052 Query 159959 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGAACAACTTTC 160018 || | || |||| ||||||| | ||| | || |||||| |||| || || ||||| Sbjct 1051 CTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTT 992 Query 160019 GCAACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGGT-GCAAACTTTCT 160077 | ||| ||||||||||||||| | |||||||||||| | || ||| |||| ||||| Sbjct 991 GTAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCT 934 Query 160078 TA-CAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGG 160136 || | ||| | ||| |||||| || | | | | || ||| | | || || |||| Sbjct 933 TAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGG 874 Query 160137 GTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTTG 160196 | || || || || |||||||| | ||| ||| | || || || |||| ||||| Sbjct 873 GCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTG 814 Query 160197 TGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCAC 160256 | || |||||||| || || || ||||| || |||||| | ||||| |||||||| || | Sbjct 813 TCGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTC 754 Query 160257 G-TCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTCTTT 160315 | ||| || | | || ||||| ||||| ||| | ||||||||||| || || || ||| Sbjct 753 GGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTT 695 Query 160316 GTCAGCGTATTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTT 160375 || ||||||||| || || ||| |||| || || ||||||| || || ||| ||| Sbjct 694 GTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTT 635 Query 160376 GGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGCTT 160435 || || ||||| || ||| |||| | | ||| | ||||||||||| || |||||| | Sbjct 634 GGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTG 575 Query 160436 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCCATC 160495 ||||| || ||||||||||||||||| || || |||| | ||| ||||| | || ||| Sbjct 574 AACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATC 515 Query 160496 CATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAG 160555 ||||| | ||| ||||| ||||| || | |||||||| || ||||||||||| Sbjct 514 CATGGGGCTACCGTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGC 455 Query 160556 GCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 160615 || ||| | | || || | ||||| |||||||| ||||||||||| |||||||| ||| Sbjct 454 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGG 395 Query 160616 TCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTT 160675 || || ||||| ||| |||| ||||| || || || ||| | ||||| || ||| | ||| Sbjct 394 TCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTT 335 Query 160676 GTGCCTGTTATGGGTCTTTGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTT 160735 || || || | ||| | |||| ||||||| | |||| || ||||| || || Sbjct 334 GTACCCGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTA 275 Query 160736 CGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCAGAATTTGAGACC 160795 ||||| || || ||||| || || || | ||||| |||||||| ||||||||||| Sbjct 274 CGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACT 215 Query 160796 TTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTGCATGGTTAGCACCTGCCGAC 160855 ||||||||||| || || || | || || || | ||||| ||| | ||| || || Sbjct 214 TTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGAT 155 Query 160856 CAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAA 160915 || || ||||| || |||| ||||| || || ||||| || | || ||||| |||||| Sbjct 154 CAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 95 Query 160916 T 160916 | Sbjct 94 T 94 Score = 414 bits (458), Expect = 1e-110 Identities = 437/573 (76%), Gaps = 2/573 (0%) Strand=Plus/Plus Query 158794 CTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTG 158853 ||||||| ||| | | |||||| | |||||||| |||||| |||| ||||||| | | Sbjct 9176 CTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAG 9235 Query 158854 GTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGC 158913 | || ||||||||||| |||| ||| |||||||||| || || |||||||||||||||| Sbjct 9236 GAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGC 9295 Query 158914 ACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGC 158973 | || || || ||| | ||||| ||||| |||||||| || || || ||| |||||||| Sbjct 9296 ATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGC 9355 Query 158974 ATGGAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAAC 159032 |||| | || || || | | | || | ||||| ||||||| ||||| || Sbjct 9356 ATGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAAT 9414 Query 159033 TATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTAC 159092 | |||||||| || || ||||||||||| || ||||| || || || || || ||||| Sbjct 9415 GAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTAT 9474 Query 159093 TTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTC 159152 || ||||| || ||||||||||| ||| ||||||||||| ||||| || ||||||||| Sbjct 9475 TTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTC 9534 Query 159153 CTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCA 159212 | ||||| |||||||| || || ||||||||||| || | || | || |||||| Sbjct 9535 TTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCA 9594 Query 159213 TTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTG 159272 |||||||| || || ||||| |||||||| || | ||||| |||| ||||| || | Sbjct 9595 TTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATT 9654 Query 159273 AACACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGT 159332 || || ||||| ||| | | |||||||| ||| ||||||||||| ||||| || ||| Sbjct 9655 AATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGT 9714 Query 159333 AACGCACACAACTTCCCACTCGACCTTGCTGCT 159365 || || ||||||||||| || ||||| |||||| Sbjct 9715 AATGCTCACAACTTCCCTCTAGACCTAGCTGCT 9747 >seq14178 Length=3042336 Score = 217 bits (240), Expect = 2e-51 Identities = 249/333 (75%), Gaps = 15/333 (5%) Strand=Plus/Minus Query 159036 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTC 159095 ||||||| ||||| ||||| |||||||| ||||||||||| || || | ||||| || Sbjct 2899413 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTACGGTTATTTT 2899354 Query 159096 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 159155 || | |||||||||||||| ||| ||||||| || ||||| || || |||||||| Sbjct 2899353 GGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTACATTTCTTCCTG 2899294 Query 159156 GCTGCAT-GGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCA 159212 ||||| | ||||||| || || ||||||||||| | ||| | || | | || || || Sbjct 2899293 GCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTG--CTTTGGGTATTAGCACTATAGCT 2899236 Query 159213 TTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTG 159272 | |||||| || |||||||| |||||||| || | ||| |||||||| | Sbjct 2899235 TGCAACCTAAATGGTTTCAATTTCAACCAATCTA----------TCAAGGTCGTGTAATT 2899186 Query 159273 AACACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGT 159332 || |||||||| ||| | | || ||||| || |||| ||||||||||||||| ||| Sbjct 2899185 AATACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATGCATGAACGT 2899126 Query 159333 AACGCACACAACTTCCCACTCGACCTTGCTGCT 159365 || | || |||||||| || ||||| |||||| Sbjct 2899125 AAAGGTCATAACTTCCCTCTAGACCTAGCTGCT 2899093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552296808448000