Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq22035 129 8e-25 seq18882 123 3e-23 seq18338 123 3e-23 seq23040 114 2e-20 seq5117 86.0 9e-12 >seq22035 Length=61329 Score = 129 bits (142), Expect = 8e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 ||||| ||||| | || | |||||| | |||| | || | |||||| || | ||||||| Sbjct 17345 CCTCCTTGATCAACATAACGGGCAGTATCATTAAACACGCGCAGCATTGGCACAATACCA 17286 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 |||||| | ||||||||||| ||||||||||||| | || ||||| || || || Sbjct 17285 TTAGATGTCCCATTTGTTCCCCGAATATAACTTCCTGTCGCACGAATGTTGTGAACTGAG 17226 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 | ||| || ||||| || ||| ||| | |||||| ||||| || |||||||| Sbjct 17225 ACACCAATACCTCCAGCTGATTTGCTGATAATAGCACACTCCTTCAAAGTATCATATATT 17166 Query 69931 CCCTCTATGCTATCATCTATCATG 69954 || || || ||||||||| ||||| Sbjct 17165 CCTTCAATACTATCATCTTTCATG 17142 Score = 113 bits (124), Expect = 6e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 ||||| |||||||| | ||| |||||||| || || |||||| || ||| | || || | Sbjct 16980 GTTCCAGCATTAAAAAGTGTGGGAGATGCATGGGTAAACCATCGTTGAGACATCATATGG 16921 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 ||||||| ||||| || || || || || || | || | || || | ||||||| Sbjct 16920 TATGTTTTGATAGCAGAATCAATGTCATCCTTGTGCAACCCAACAGCAACCCTCATCAAC 16861 Query 70111 ATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGA 70170 ||||| ||||||| |||||| ||| | | ||||| ||||| || | ||||| Sbjct 16860 ATATGTTGAGGTCTTTCTACAACTTTTCCTTGGACCTTCAAGAGGTAGGACCTCTCCAGG 16801 Query 70171 GTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 ||||| || |||||||| | || ||| || | ||||| ||||| Sbjct 16800 GTTTTGAAGCCAAAATAATCATAGTCAAAATCCCGATCGTAGATAAT 16754 >seq18882 Length=869960 Score = 123 bits (136), Expect = 3e-23 Identities = 389/598 (65%), Gaps = 6/598 (1%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || || || || || || |||||||||| || || ||||| || ||||| | Sbjct 814222 GCACGCAAAATCGCAGTGGAGACCCTCATCTCGCGAGATCAACTCGTTTGAGAATGTTAA 814281 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT-CCAGAAAAGA 39734 ||| ||||||| || |||||||||||||||||||| || |||||| | || || |||| Sbjct 814282 TCCCGGCATTAACCCTCGCTTTTTGAGCCAAAATATCGC-GCAAAAACTCCCTGAGAAGA 814340 Query 39735 AGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA--CTTGTATCATTATG 39792 | || || || || ||||| || | | |||||| || || || | | | Sbjct 814341 AAATCCCCTCCACGCAAGCAAACGCGATTAATCTCTCGGCGAAAGTCTCCGAGC--CGTC 814398 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 ||||| || ||||| |||||||| || || || | ||||| || || | Sbjct 814399 GATCCAATTTAACGCCCACGTGGCTTTCTTTGCGACGCAGGGAACCGTTTCGATGGCGTG 814458 Query 39853 AAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACAT 39912 ||||||| || ||||| || | ||| | || || |||| | ||| ||||| Sbjct 814459 AAAGAGACGATTCTTTTCGTCGGAGTTTTTGATGTAAGTTTCTAGAAGCAGCGAGTACAT 814518 Query 39913 TTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 39972 ||| || |||||||| ||||| || || || || ||||| || | || || | | Sbjct 814519 TTCGGAGTGGATGTTCTCAATGGCGATTTGGAAGCCGTAGAAGGCACGCGCCTCGGCGAC 814578 Query 39973 TTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGC 40032 || ||||| | || || | || | || || || || || || ||||| Sbjct 814579 CTGGACCTCCGTCATGAACCTGCCGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGCGGC 814638 Query 40033 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTC 40092 || || || | || || | | || | || || || | || | | ||||| Sbjct 814639 GAAGAAGGCGAGCACGTGCGTGACGAAGTGCTTCTCGTCAGCGGTTAGGGCCTCCCAGTG 814698 Query 40093 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTT 40152 || ||||| || | ||| ||||| ||||| |||||||||||||| || || || || Sbjct 814699 GCGGAGATCTTGCGAAAGATCAACTTCCTCAGCGGTCCAAAACGACGCTTCGGCTTTCTT 814758 Query 40153 GTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATTT 40210 |||||| | ||| || | | || || || || || ||| ||||| || |||||| Sbjct 814759 GTACATTTCCCAAATTTGTGGGTACTGAATCGGGAACATACAAAATCGATCGGGATTT 814816 >seq18338 Length=6336 Score = 123 bits (136), Expect = 3e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 |||||| |||||||| | |||||||||||| || ||||||||| ||| || | || || Sbjct 1927 AGTTCCAGCATTAAAAAGTGTAGGAGATGCATGGGTGAACCATCTTTGGGACATCATATG 1868 Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109 |||||||| |||||| || || ||||| || |||||||| || | || | |||||| Sbjct 1867 GTATGTTTTAATAGCGGAATCAATATCATCCTTGTGAATTCCAATAGAAACCCTCATCAA 1808 Query 70110 CATATGCTGAGGTCGTTCTAC 70130 |||||||||||| | |||||| Sbjct 1807 CATATGCTGAGGCCTTTCTAC 1787 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 ||||||||||| | || | |||||| | |||| | || | |||||| || | ||| ||| Sbjct 2256 CCTCCCTGATCCACATAACGGGCAGTATCATTAAACACCCGCAGCATTGGGACAATGCCA 2197 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 || ||| | || ||||||||| |||||||||||| |||| ||||| || || || Sbjct 2196 TTGGATGTCCCGTTTGTTCCACGAATATAACTTCCAGTTGCACGAATGTTGTGAACCGAG 2137 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 | ||| || ||||| || ||| ||| | |||||| ||||| || ||||| || Sbjct 2136 ACACCAATACCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAAGTTTCATAGATT 2077 Query 69931 CCCTCTATGCTATCATCTATCAT 69953 || || || ||||||||| |||| Sbjct 2076 CCTTCAATACTATCATCTTTCAT 2054 >seq23040 Length=7163423 Score = 114 bits (126), Expect = 2e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 ||| || ||||| | |||| ||||||| |||| | ||| |||||||| | ||| || Sbjct 4860739 TCCCCCTTGATCAACATATCGAGCAGTGTCATTAAACACTTGGAGCATCGGGACAATGCC 4860798 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||| || |||||||||||| || ||||| ||| || || | |||| ||| || Sbjct 4860799 ATTGGAAGATCCATTTGTTCCATGGATGTAACTGCCTGAGGCACGGACATTATGAATGGA 4860858 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 ||||| |||||||| || ||| || | |||||| |||| || |||||||| Sbjct 4860859 GAGACCAATTCCTCCAGCTGATTTGCTAATGATAGCACACTCCTTCAGGGTATCATATAT 4860918 Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 || || ||||| |||||| ||||| | |||||| |||||| Sbjct 4860919 GCCTTCAATGCTGTCATCTTTCATGCACAAAAGAAAGCAGCTA 4860961 >seq5117 Length=452333 Score = 86.0 bits (94), Expect = 9e-12 Identities = 93/121 (77%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || ||||||||||| || |||||||||||| || | ||||| || || || | Sbjct 190496 GCAAGCAAAGTCACAATGAAGCCCCTCATCTCTAGATATAAGCTCGTTCGAGAACGTCAA 190437 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| || || | |||||| ||||| ||||||||| |||||| | |||| |||| Sbjct 190436 ACCTGGCATCAGTCCCCTCTTTTTAAGCCAGAATATGGCA-CAAAAGCT-GAGAATAGAA 190379 Query 39736 G 39736 | Sbjct 190378 G 190378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686688989184000