Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq25300 118 9e-22
seq4300 118 9e-22
seq5785 105 6e-18
seq16041 98.7 8e-16
seq3592 98.7 8e-16
>seq25300
Length=5305897
Score = 118 bits (130), Expect = 9e-22
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109
|| || || ||||| || |||||||| ||| ||| || |||| || ||||| || ||
Sbjct 1946513 GTTGACTCCTTTTGGATGTTGTAGTCAGCTAGGGTTCTGC-CGTCCTCAAGCTGCTTTCC 1946455
Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169
|||| | |||||||||||||| ||||| || | ||||| || || ||||||| ||
Sbjct 1946454 GGCGAAGATGAGACGCTGTTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTT 1946395
Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229
| | || | ||||| | | ||| || ||||| ||||||| || ||||| || ||
Sbjct 1946394 GACATTGTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATAGTCTTTCCCGTTAGGGT 1946335
Query 27230 TTTCACAAAGATTTGCATAGCTGC 27253
|||||| ||||| ||||| |||||
Sbjct 1946334 TTTCACGAAGATCTGCATGGCTGC 1946311
>seq4300
Length=903212
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078
|||||||||| | || | || | ||| | || || || || || || ||||| |||
Sbjct 740048 TGCCTCCGCGGAGACGAAGGACAAGATGAAGGGTTGACTCCTTCTGTATGTTGTAATCGG 739989
Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138
|| | |||| |||| |||||||| || || || | || || | |||||| |||||||
Sbjct 739988 CCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGTTGGTCCGGCG 739929
Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198
| | ||||| || || ||||||| || | | | || | ||||| | | || |
Sbjct 739928 GAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACGTTGTCGATGGTGTCGGAGCTCTCGA 739869
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|||| ||||| |||| |||||| || ||||||||||| ||||| ||||||
Sbjct 739868 CTTCGAGAGTAATAGTTTTGCCGGTAAGAGTTTTCACGAAGATCTGCATA 739819
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTG 27103
||| || || || ||||||||||| ||||| ||| || |||| |||||||||| ||
Sbjct 850561 ATGCAAAGTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTG 850502
Query 27104 TTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTT 27163
|| ||||| | ||||||||||| || |||||||| | ||||| || || ||||||
Sbjct 850501 CTTCCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTT 850442
Query 27164 GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223
| || | | | || | ||||| | | || ||||| || || || | ||||| ||
Sbjct 850441 GGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACTTCGAGGGTGATTGTCTTGCCGGT 850382
Query 27224 CAGAGTTTTCACAAAGATTTGCAT 27247
|| ||||||||||| || |||||
Sbjct 850381 GAGGGTTTTCACAAATATCTGCAT 850358
>seq5785
Length=266748
Score = 105 bits (116), Expect = 6e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097
||||| || | ||| || || || || ||||| ||||| || || |||| | || ||
Sbjct 243590 ACCAAGTGGAGCGTTGATTCCTTCTGGATATTATAGTCAG-CAAGTGTGCGACCATCCTC 243648
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
|||||||||||| || | || || | ||| ||||| || || | || || || ||
Sbjct 243649 GAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTG 243708
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
||||||| ||| | | || | ||||| | | |||||| || || ||||| | ||
Sbjct 243709 GATCTTGGCTTTTACATTATCAATGGTGTCGGAGCTTTCAACCTCAAGGGTTATTGTCTT 243768
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| || |||||||||||||||||||||||
Sbjct 243769 GCCGGTGAGAGTTTTCACAAAGATTTGCAT 243798
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || ||||| ||||| || ||||| | | | | |||||
Sbjct 242678 ACCAAGTGGAGAGTGGATTCTTTCTGAATGTTATAGTCTGCAAGAGTCCTTCCATCTTCA 242737
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || || ||||||| | ||| ||||| || || | |||||| || ||
Sbjct 242738 AGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTGA 242797
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|| ||| ||||| | | || | ||||| | |||||| || ||||| || | |||
Sbjct 242798 ATTTTGGCTTTCACGTTGTCGATGGTGTCAGAACTTTCAACCTCAAGAGTAATTGTTTTT 242857
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || |||||||||||||| ||||||
Sbjct 242858 CCGGTGAGCGTTTTCACAAAGATCTGCATA 242887
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||||||| | || || || || || || || ||||| | |||| | || |||
Sbjct 168048 ACCAAATGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGAGTGCGACCATCCTCG 168107
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||||||||| || | ||||| | || || || || || | || || ||||| |
Sbjct 168108 AGCTGTTTACCAGCAAAGATGAGTCTTTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGG 168167
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| ||| | | | || | ||||| | | ||| || || || ||||| | |||
Sbjct 168168 ATCTTGGCTTTTACGTTATCAATGGTGTCAGAGCTTTCGACCTCAAGGGTTATGGTCTTG 168227
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || ||||| || ||||||||||||||
Sbjct 168228 CCAGTGAGAGTCTTAACAAAGATTTGCAT 168256
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || ||||| ||||| || ||||| | | | | |||||
Sbjct 171242 ACCAAGTGGAGAGTGGATTCTTTCTGAATGTTATAGTCTGCAAGAGTCCTTCCATCTTCA 171301
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || || ||||||| | ||| ||||| || || | |||||| || ||
Sbjct 171302 AGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTGA 171361
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|| ||| ||||| | || | ||||| | | ||| || || ||||| || | |||
Sbjct 171362 ATTTTGGCTTTCACATTGTCAATGGTGTCAGAGCTTTCTACCTCAAGAGTGATTGTTTTT 171421
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||||| || ||||||||||| || ||||||
Sbjct 171422 CCCGTGAGGGTTTTCACAAAAATCTGCATA 171451
>seq16041
Length=904
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || ||||||||| || | | || ||||||||||||| || |||
Sbjct 373 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGTCCGTCTTCGAGCTGCTTGCCG 432
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | ||||| ||||| || ||||| || | ||||| || || |||||| ||
Sbjct 433 GCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 492
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||| | || || || || | ||||| | || ||||| || |||
Sbjct 493 ACGTTGTCAATTGTGTCGGAGGACTCCACCTCCAACGTTATGGTCTTACCCGTTAGGGTT 552
Query 27231 TTCACAAAGATTTGCAT 27247
||||| ||||| |||||
Sbjct 553 TTCACGAAGATCTGCAT 569
>seq3592
Length=5743183
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || ||||||||| || | | || ||||||||||||| || |||
Sbjct 5552038 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGTCCGTCTTCGAGCTGCTTGCCG 5551979
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | ||||| ||||| || ||||| || | ||||| || || |||||| ||
Sbjct 5551978 GCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 5551919
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||| | || || || || | ||||| | || ||||| || |||
Sbjct 5551918 ACGTTGTCAATTGTGTCGGAGGACTCCACCTCCAACGTTATGGTCTTACCCGTTAGGGTT 5551859
Query 27231 TTCACAAAGATTTGCAT 27247
||||| ||||| |||||
Sbjct 5551858 TTCACGAAGATCTGCAT 5551842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424801820467200
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