Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq18882 91.5 2e-13 seq5781 82.4 9e-11 >seq18882 Length=869960 Score = 91.5 bits (100), Expect = 2e-13 Identities = 374/580 (64%), Gaps = 15/580 (3%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || |||||||||||| || || ||||| | || || ||||| | || Sbjct 814226 GCAAAATCGCAGTGGAGACCCTCATCTCGCGAGATCAACTCGTTTGAGAATGTTAATCCC 814285 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| | || ||||| || | ||| || ||||| ||||| || |||||||| ||| Sbjct 814286 GGCATTAACCCTCGCTTTTTGAGCCAAAATATCGCGCAAAAACTCCCTGAGAAGAAAATC 814345 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGGGACTTTGTATCAAA 130194 |||||||| || || ||||| | | | ||| || |||| | | | || | Sbjct 814346 CCCTCCACGCAAGCAAACGCGATTAATCTCTCGGCGAAAGTCTCCGAGC----CGTCGAT 814401 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254 ||| || | ||||||| || || || ||| || || || || | ||| || | ||| Sbjct 814402 CCAATTTAACGCCCACGTGGCTTTCTTTGCGACGCAGGGAACCGTTTCGATGGCGTGAAA 814461 Query 130255 GAGTTCCTTCTTTTCTGATGGA-TCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 130313 ||| |||||||| | ||| | ||||||||| | |||| || || || ||| Sbjct 814462 GAGACGATTCTTTTC-GTCGGAGTTTTTGATGTAAGTTTCTAGAAGCAGCGAGTACATTT 814520 Query 130314 CGCCATGGACCATTTCATTATGGC--ACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 130371 || |||| | ||| ||||| || | ||||||| | ||||| ||| | Sbjct 814521 CGGAGTGGATGTTCTCA--ATGGCGATTTGGAAGCCGTAGAAGGCACGCGCCTCGGCGAC 814578 Query 130372 CTGTACCT-CATC-TGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 130429 ||| |||| | || || || || || ||||| | || || || ||||| | Sbjct 814579 CTGGACCTCCGTCATG--AACCTGCCGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGCG 814636 Query 130430 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAG 130489 || || || || || | | | | | ||| | || || | || | |||| || |||| Sbjct 814637 GCGAAGAAGGCGAGCACGTGCGTGACGAAGTGCTTCTCGTCAGCGGTTAGGGCCTCCCAG 814696 Query 130490 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTC 130549 | | ||||| | ||| ||||| || ||||| || |||||| | || || ||| Sbjct 814697 TGGCGGAGATCTTGCGAAAGATCAACTTCCTCAGCGGTCCAAAACGACGCTTCGGCTTTC 814756 Query 130550 TTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAACA 130589 || || | |||||| | || || |||| | ||||||| Sbjct 814757 TTGTACATTTCCCAAATTTGTGGGTACTGAATCGGGAACA 814796 >seq5781 Length=108451 Score = 82.4 bits (90), Expect = 9e-11 Identities = 214/319 (67%), Gaps = 8/319 (3%) Strand=Plus/Plus Query 14113 GTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAA 14172 ||| || || || || |||| ||| || || | ||||| |||||||| || ||||| Sbjct 97602 GTTAGTTGCAGCAATCACAATGATACCAGTATTACCCTCAAAACCATCCATTTCCGTCAA 97661 Query 14173 GAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCA--CCCGCACTGCGT 14230 || || || | |||||| || | ||||||||| | | | | | || | | | | Sbjct 97662 AAGCTGGTTAAGGGTTTGCTCTCTCTCATCATTCCCT--CCTCCAATTCCAGTTCCTCTT 97719 Query 14231 TGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTC-ACGGGC 14289 || | || ||||| ||||||||||| | || || || || || ||| || || | Sbjct 97720 TGTCTTCCAACGGCATCAATTTCATCCACAAATACAATGCAAGGAGCATTCTCTTTGGCC 97779 Query 14290 AACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 14349 ||| ||| | |||||| ||||| ||||| ||||| ||||||||||| ||||| | Sbjct 97780 TTCTTGAAA-AGATCTCGGACTCTAGATGCACCTACACCAACAAACATCTCAACAAACTC 97838 Query 14350 GGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGA 14408 | | | | || | || || || || | |||||| || || || ||| || | Sbjct 97839 AGAACCTG-ATATGGAGAAAAATGGAACACCGGCTTCACCAGCAATTGCCTTGGCAAGAA 97897 Query 14409 GGGTCTTCCCCGTCCCTGG 14427 | |||||||| || ||||| Sbjct 97898 GAGTCTTCCCGGTTCCTGG 97916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618237300736000