Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq20453 89.7 6e-13 seq18882 89.7 6e-13 seq25026 82.4 8e-11 seq9433 82.4 8e-11 >seq20453 Length=5924519 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||||||| |||| | || |||| ||||||||||||||||||||||||||| ||||| Sbjct 2350703 TGCTTTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 2350762 Query 79684 TGAGCTACGAAAGC 79697 |||||||||||||| Sbjct 2350763 TGAGCTACGAAAGC 2350776 >seq18882 Length=869960 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 12/228 (5%) Strand=Plus/Plus Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515 |||| ||| || || || ||||||||||| || || |||||||||| | |||||| Sbjct 813931 CTTTTGATATTCCCCAACTCGCTTTTCAAAGAAATTAGTCTTCCCTTGGAGCGAGATTAG 813990 Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTC---TCCCCAAACTGTGC 74572 ||||||||| || ||||| ||| ||||||| | ||||| | ||||| | | Sbjct 813991 CTCCATCCAATCAAAAGGATTCGCCACACCGTACA---GCTTCCCGTACCCAAGCGCACC 814047 Query 74573 CATGAGGCGATCCGCCACAAATTGAATGTACTG---CGTCATTTCTCCCGCATCCATGCC 74629 || | | |||||| ||||| | |||||||| | ||| ||||| ||| ||| || Sbjct 814048 CAACAACCTATCCGCGACAAACTCTATGTACTGACTCATCAATTCTC---CATTCATCCC 814104 Query 74630 GATGAGTTTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTC 74677 | | ||||||||| || ||| | |||||| ||||| | ||| Sbjct 814105 CACCAACGCGCACGGCAGCGCATCGCACACAAACTCTCTCTCTATCTC 814152 >seq25026 Length=2017250 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 79622 GACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACC 79680 || |||| ||| |||| | || |||| ||||||||||||||||||||||||||| ||| Sbjct 1675083 GATTGCTCTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACC 1675142 Query 79681 AATTGAGCTACGAAAGC 79697 || |||||||||| ||| Sbjct 1675143 AACTGAGCTACGAGAGC 1675159 >seq9433 Length=1466450 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 79624 CTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAA 79682 ||||| ||| |||| | || |||| ||||||||||||||||||||||||||| ||||| Sbjct 125088 CTGCTCTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAA 125029 Query 79683 TTGAGCTACGAAAGC 79697 |||||||||| ||| Sbjct 125028 CTGAGCTACGAGAGC 125014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547040890880000