Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_028663.1
Length=188632
Score E
Sequences producing significant alignments: (Bits) Value
seq22333 587 9e-163
seq17466 401 8e-107
seq14178 197 2e-45
seq22581 140 4e-28
>seq22333
Length=1412734
Score = 587 bits (650), Expect = 9e-163
Identities = 704/954 (74%), Gaps = 2/954 (0%)
Strand=Plus/Plus
Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205
||||| |||||||||||||||| | ||||| || | | | || || | | |||
Sbjct 733257 TTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTA 733315
Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265
||||| | || || ||||| || || || || ||||| ||||||||||| ||||| ||
Sbjct 733316 TTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGACGGTATTCGTGAACCTGTT 733375
Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325
| ||||||||||| ||||||||||| || || || || || | | || | ||
Sbjct 733376 TCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTACTTCTGCA 733435
Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385
|| ||||| | || || ||||| || |||||||| ||| | ||||| |||||| | |||
Sbjct 733436 GCTATCGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATGGTTATAC 733495
Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445
||||| || || || | || |||| | |||||| | | ||| | | |||||||
Sbjct 733496 AATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATG 733555
Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505
|| || | ||||||||||||| | | || || |||||||||||||| |||||||||
Sbjct 733556 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATAT 733615
Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565
|| || || || | |||||| || |||||| | |||| ||| ||||||||||| |
Sbjct 733616 TCAGCTCCTGTTGCAGCAGCGGCTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGT 733675
Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625
|| ||||||||||||||||| || || || ||||| |||||||| ||| ||||||||||
Sbjct 733676 TTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAG 733735
Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685
|| ||||||||||| || |||||||||||||| ||| | || ||||| ||||| || ||
Sbjct 733736 GCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCGTAGCTGGTGTATTCGGC 733795
Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACA 176745
|| || || ||| || ||||| || | || || ||| | | || || ||
Sbjct 733796 GGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACC 733855
Query 176746 ACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAAC 176805
|| ||||| ||||| || | ||||||| |||||| ||||| ||||| || || ||
Sbjct 733856 ACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAAT 733915
Query 176806 ATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAAC 176865
|| |||||||| |||||||| ||||| || | |||||||| |||||| |||||| ||
Sbjct 733916 ATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAAT 733975
Query 176866 TCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCA 176925
|| | | | || |||||||| || || | || || || | |||||||| |||||
Sbjct 733976 TCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCT 734035
Query 176926 ATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTA 176985
| ||| || |||| ||||| |||||||| || |||||||| |||||||| ||||| |
Sbjct 734036 TTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTT 734095
Query 176986 GACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGT 177045
|| | ||| || ||| ||| |||| ||||| |||| ||||| |||||||||
Sbjct 734096 GATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTTGGT 734155
Query 177046 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 177099
|||||||||||||| || ||||||||||| |||||||| || ||||| ||||||
Sbjct 734156 ATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCT 734209
Score = 253 bits (280), Expect = 2e-62
Identities = 317/432 (73%), Gaps = 2/432 (0%)
Strand=Plus/Plus
Query 176669 TAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTT 176728
|||| ||||| || || || || || ||| || ||||| || | || || |||
Sbjct 732401 TAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTA 732460
Query 176729 CACTTGTT-AGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAA 176787
| ||| | || || || || ||||| |||| || | ||||||| |||||| |||
Sbjct 732461 -ATTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTCAA 732519
Query 176788 GAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAG 176847
|| ||||| || || || || |||||||| |||||||| ||||| || | ||||||||
Sbjct 732520 GAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAA 732579
Query 176848 TATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTT 176907
|||||| |||||| || || | | | || |||||||| || || | || || ||
Sbjct 732580 TATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTA 732639
Query 176908 TGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAAC 176967
| |||||||| ||||| | ||| || |||| ||||| |||||||| || ||||||||
Sbjct 732640 GGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAAT 732699
Query 176968 TTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTT 177027
|||||||| ||||| | || | ||| || ||| ||| |||| ||||| ||
Sbjct 732700 TTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATT 732759
Query 177028 AACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTT 177087
|| ||||| ||||||||||||||||||||||| || ||||||||||| |||||||| ||
Sbjct 732760 AATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTA 732819
Query 177088 GACCTTGCTGCT 177099
||||| ||||||
Sbjct 732820 GACCTAGCTGCT 732831
>seq17466
Length=9900
Score = 401 bits (444), Expect = 8e-107
Identities = 431/570 (76%), Gaps = 0/570 (0%)
Strand=Plus/Plus
Query 176530 GCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGC 176589
|| |||||| | | ||||| | ||||||||| ||||||||||||||||||| | ||
Sbjct 9178 GCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGA 9237
Query 176590 ATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCAC 176649
|| || ||||| |||||||||||| |||||||||| || ||||||||||| || |||||
Sbjct 9238 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCAT 9297
Query 176650 CCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCAC 176709
||||| || ||| | || ||||| ||||| || || || || || ||| || |||||
Sbjct 9298 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 9357
Query 176710 GGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTAC 176769
|| | || || ||| | | || || || || ||||| || || || |
Sbjct 9358 GGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAG 9417
Query 176770 GGTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTT 176829
||||||||||| || |||||||||||||| || |||||||| ||||| |||||||| |||
Sbjct 9418 GGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTT 9477
Query 176830 GGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTT 176889
||||| | |||||||| |||||| |||||| ||||| | | | ||||||||| |
Sbjct 9478 GGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTG 9537
Query 176890 GCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTC 176949
|| || | || || || | |||||||| ||||| | ||| || | || |||||||||
Sbjct 9538 GCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTC 9597
Query 176950 AACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCT 177009
||||| || || ||||| |||||||| ||||| | || | ||| || ||| |
Sbjct 9598 AACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAAT 9657
Query 177010 ACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAAT 177069
|| |||| |||||| | |||||||| || |||||||||||||| |||||||| ||||||
Sbjct 9658 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 9717
Query 177070 GCTCACAACTTCCCACTTGACCTTGCTGCT 177099
|||||||||||||| || ||||| ||||||
Sbjct 9718 GCTCACAACTTCCCTCTAGACCTAGCTGCT 9747
Score = 120 bits (132), Expect = 4e-22
Identities = 182/259 (70%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265
||||| | || || || || || || || || ||||| || |||||||| || || ||
Sbjct 8911 TTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTT 8970
Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325
| || ||| |||| ||||||||||| || || || || || | | || | ||
Sbjct 8971 TCTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCG 9030
Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385
|| |||||| | || || |||||||| |||||||| ||| | ||||| |||||| | |||
Sbjct 9031 GCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATAC 9090
Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445
||||| || || || | || |||| | |||||| | | ||| | | ||| |||
Sbjct 9091 AATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATG 9150
Query 176446 GGACGCCAATGGGAACTTA 176464
|| || | ||||||||||
Sbjct 9151 GGTCGTGAGTGGGAACTTA 9169
>seq14178
Length=3042336
Score = 197 bits (218), Expect = 2e-45
Identities = 263/364 (72%), Gaps = 11/364 (3%)
Strand=Plus/Minus
Query 176737 AGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAG 176796
|| || || || |||| ||||| || | ||||||| |||||| ||||| |||||
Sbjct 2899446 AGGGAAACCACATAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAA 2899387
Query 176797 ACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCT 176856
|| || || || |||||||| ||||||| ||||| | | |||||||| |||||| |
Sbjct 2899386 ACTTATAATATCGTAGCTGCTTACGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGT 2899327
Query 176857 TTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTC-CCAGTTGTTTGCATCTG 176915
|||| || || | | | || |||||||| || || | || || || | |||||
Sbjct 2899326 GTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGGCCTGTAGTAGGTATCTG 2899267
Query 176916 GTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCA 176975
||| ||||| ||||| || |||| || || | |||||| || |||||||| ||||||||
Sbjct 2899266 GTTCACTGCTTTGGGTATTAGCACTATAGCTTGCAACCTAAATGGTTTCAATTTCAACCA 2899207
Query 176976 GTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGC 177035
||| || || ||| || ||| ||| |||| ||||| |||| |||||
Sbjct 2899206 ATCTATC------AA----GGTCGTGTAATTAATACCTGGGCTGATATTATTAATCGTGC 2899157
Query 177036 AAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGC 177095
||||| |||| |||||||||||| || ||||| | ||| |||||||| || ||||| ||
Sbjct 2899156 TAACCTCGGTACGGAAGTTATGCATGAACGTAAAGGTCATAACTTCCCTCTAGACCTAGC 2899097
Query 177096 TGCT 177099
||||
Sbjct 2899096 TGCT 2899093
>seq22581
Length=12620
Score = 140 bits (154), Expect = 4e-28
Identities = 204/286 (71%), Gaps = 2/286 (1%)
Strand=Plus/Minus
Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354
||||||||| | || || ||||| || ||| || | || ||| | | ||| || ||
Sbjct 9055 ACCTGTAACGATTCACTACCCTTATGAAAAATCAATTACATCGGAGCGTTTCCGGGGGCG 8996
Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414
||||||| ||| ||||| || || || || ||||| || ||||| | |||||||| ||
Sbjct 8995 AATACACTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGCGTATGCCCGAT 8936
Query 19415 CAATCTACCAGTGGTGGATTGG-GTGATGAACAAACAGACAAAGAAGAAAGAACTTAGAA 19473
||||||| | ||||||||| | |||| || | | || | |||| || | |
Sbjct 8935 AGATCTACCTCTTGTGGATTGGAGATTTGAA-AAGGATATTAAAAGGAAACAATTGCTTA 8877
Query 19474 ATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCAA 19533
||||| || || || |||| ||||| || || |||||||| || || || || || |
Sbjct 8876 ATTATAGTATTGATTTCGGAGTTTGTATATTTTGTGGTAACTGTGTTGAATACTGTCCGA 8817
Query 19534 CAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579
|||| ||| |||| ||||| |||||||||||| | |||| | |||
Sbjct 8816 CAAATTGTTTATCGATGACTGAAGAATATGAACTTTCTACTTATGA 8771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603301281792000
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