Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq22333 587 9e-163 seq17466 401 8e-107 seq14178 197 2e-45 seq22581 140 4e-28 >seq22333 Length=1412734 Score = 587 bits (650), Expect = 9e-163 Identities = 704/954 (74%), Gaps = 2/954 (0%) Strand=Plus/Plus Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205 ||||| |||||||||||||||| | ||||| || | | | || || | | ||| Sbjct 733257 TTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTA 733315 Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| | || || ||||| || || || || ||||| ||||||||||| ||||| || Sbjct 733316 TTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGACGGTATTCGTGAACCTGTT 733375 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325 | ||||||||||| ||||||||||| || || || || || | | || | || Sbjct 733376 TCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTACTTCTGCA 733435 Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385 || ||||| | || || ||||| || |||||||| ||| | ||||| |||||| | ||| Sbjct 733436 GCTATCGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATGGTTATAC 733495 Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445 ||||| || || || | || |||| | |||||| | | ||| | | ||||||| Sbjct 733496 AATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATG 733555 Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505 || || | ||||||||||||| | | || || |||||||||||||| ||||||||| Sbjct 733556 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATAT 733615 Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565 || || || || | |||||| || |||||| | |||| ||| ||||||||||| | Sbjct 733616 TCAGCTCCTGTTGCAGCAGCGGCTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGT 733675 Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625 || ||||||||||||||||| || || || ||||| |||||||| ||| |||||||||| Sbjct 733676 TTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAG 733735 Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685 || ||||||||||| || |||||||||||||| ||| | || ||||| ||||| || || Sbjct 733736 GCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCGTAGCTGGTGTATTCGGC 733795 Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACA 176745 || || || ||| || ||||| || | || || ||| | | || || || Sbjct 733796 GGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACC 733855 Query 176746 ACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAAC 176805 || ||||| ||||| || | ||||||| |||||| ||||| ||||| || || || Sbjct 733856 ACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAAT 733915 Query 176806 ATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAAC 176865 || |||||||| |||||||| ||||| || | |||||||| |||||| |||||| || Sbjct 733916 ATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAAT 733975 Query 176866 TCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCA 176925 || | | | || |||||||| || || | || || || | |||||||| ||||| Sbjct 733976 TCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCT 734035 Query 176926 ATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTA 176985 | ||| || |||| ||||| |||||||| || |||||||| |||||||| ||||| | Sbjct 734036 TTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTT 734095 Query 176986 GACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGT 177045 || | ||| || ||| ||| |||| ||||| |||| ||||| ||||||||| Sbjct 734096 GATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTTGGT 734155 Query 177046 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 177099 |||||||||||||| || ||||||||||| |||||||| || ||||| |||||| Sbjct 734156 ATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCT 734209 Score = 253 bits (280), Expect = 2e-62 Identities = 317/432 (73%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 176669 TAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTT 176728 |||| ||||| || || || || || ||| || ||||| || | || || ||| Sbjct 732401 TAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTA 732460 Query 176729 CACTTGTT-AGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAA 176787 | ||| | || || || || ||||| |||| || | ||||||| |||||| ||| Sbjct 732461 -ATTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCGGTCAA 732519 Query 176788 GAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAG 176847 || ||||| || || || || |||||||| |||||||| ||||| || | |||||||| Sbjct 732520 GAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAA 732579 Query 176848 TATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTT 176907 |||||| |||||| || || | | | || |||||||| || || | || || || Sbjct 732580 TATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTA 732639 Query 176908 TGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAAC 176967 | |||||||| ||||| | ||| || |||| ||||| |||||||| || |||||||| Sbjct 732640 GGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAAT 732699 Query 176968 TTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTT 177027 |||||||| ||||| | || | ||| || ||| ||| |||| ||||| || Sbjct 732700 TTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATT 732759 Query 177028 AACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTT 177087 || ||||| ||||||||||||||||||||||| || ||||||||||| |||||||| || Sbjct 732760 AATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTA 732819 Query 177088 GACCTTGCTGCT 177099 ||||| |||||| Sbjct 732820 GACCTAGCTGCT 732831 >seq17466 Length=9900 Score = 401 bits (444), Expect = 8e-107 Identities = 431/570 (76%), Gaps = 0/570 (0%) Strand=Plus/Plus Query 176530 GCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGC 176589 || |||||| | | ||||| | ||||||||| ||||||||||||||||||| | || Sbjct 9178 GCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGA 9237 Query 176590 ATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCAC 176649 || || ||||| |||||||||||| |||||||||| || ||||||||||| || ||||| Sbjct 9238 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCAT 9297 Query 176650 CCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCAC 176709 ||||| || ||| | || ||||| ||||| || || || || || ||| || ||||| Sbjct 9298 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 9357 Query 176710 GGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTAC 176769 || | || || ||| | | || || || || ||||| || || || | Sbjct 9358 GGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAG 9417 Query 176770 GGTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTT 176829 ||||||||||| || |||||||||||||| || |||||||| ||||| |||||||| ||| Sbjct 9418 GGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTT 9477 Query 176830 GGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTT 176889 ||||| | |||||||| |||||| |||||| ||||| | | | ||||||||| | Sbjct 9478 GGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTG 9537 Query 176890 GCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTC 176949 || || | || || || | |||||||| ||||| | ||| || | || ||||||||| Sbjct 9538 GCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTC 9597 Query 176950 AACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCT 177009 ||||| || || ||||| |||||||| ||||| | || | ||| || ||| | Sbjct 9598 AACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAAT 9657 Query 177010 ACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAAT 177069 || |||| |||||| | |||||||| || |||||||||||||| |||||||| |||||| Sbjct 9658 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 9717 Query 177070 GCTCACAACTTCCCACTTGACCTTGCTGCT 177099 |||||||||||||| || ||||| |||||| Sbjct 9718 GCTCACAACTTCCCTCTAGACCTAGCTGCT 9747 Score = 120 bits (132), Expect = 4e-22 Identities = 182/259 (70%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| | || || || || || || || || ||||| || |||||||| || || || Sbjct 8911 TTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTT 8970 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325 | || ||| |||| ||||||||||| || || || || || | | || | || Sbjct 8971 TCTGGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCG 9030 Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385 || |||||| | || || |||||||| |||||||| ||| | ||||| |||||| | ||| Sbjct 9031 GCGATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATAC 9090 Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445 ||||| || || || | || |||| | |||||| | | ||| | | ||| ||| Sbjct 9091 AATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATG 9150 Query 176446 GGACGCCAATGGGAACTTA 176464 || || | |||||||||| Sbjct 9151 GGTCGTGAGTGGGAACTTA 9169 >seq14178 Length=3042336 Score = 197 bits (218), Expect = 2e-45 Identities = 263/364 (72%), Gaps = 11/364 (3%) Strand=Plus/Minus Query 176737 AGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAG 176796 || || || || |||| ||||| || | ||||||| |||||| ||||| ||||| Sbjct 2899446 AGGGAAACCACATAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAA 2899387 Query 176797 ACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCT 176856 || || || || |||||||| ||||||| ||||| | | |||||||| |||||| | Sbjct 2899386 ACTTATAATATCGTAGCTGCTTACGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGT 2899327 Query 176857 TTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTC-CCAGTTGTTTGCATCTG 176915 |||| || || | | | || |||||||| || || | || || || | ||||| Sbjct 2899326 GTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGGCCTGTAGTAGGTATCTG 2899267 Query 176916 GTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCA 176975 ||| ||||| ||||| || |||| || || | |||||| || |||||||| |||||||| Sbjct 2899266 GTTCACTGCTTTGGGTATTAGCACTATAGCTTGCAACCTAAATGGTTTCAATTTCAACCA 2899207 Query 176976 GTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGC 177035 ||| || || ||| || ||| ||| |||| ||||| |||| ||||| Sbjct 2899206 ATCTATC------AA----GGTCGTGTAATTAATACCTGGGCTGATATTATTAATCGTGC 2899157 Query 177036 AAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGC 177095 ||||| |||| |||||||||||| || ||||| | ||| |||||||| || ||||| || Sbjct 2899156 TAACCTCGGTACGGAAGTTATGCATGAACGTAAAGGTCATAACTTCCCTCTAGACCTAGC 2899097 Query 177096 TGCT 177099 |||| Sbjct 2899096 TGCT 2899093 >seq22581 Length=12620 Score = 140 bits (154), Expect = 4e-28 Identities = 204/286 (71%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354 ||||||||| | || || ||||| || ||| || | || ||| | | ||| || || Sbjct 9055 ACCTGTAACGATTCACTACCCTTATGAAAAATCAATTACATCGGAGCGTTTCCGGGGGCG 8996 Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414 ||||||| ||| ||||| || || || || ||||| || ||||| | |||||||| || Sbjct 8995 AATACACTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGCGTATGCCCGAT 8936 Query 19415 CAATCTACCAGTGGTGGATTGG-GTGATGAACAAACAGACAAAGAAGAAAGAACTTAGAA 19473 ||||||| | ||||||||| | |||| || | | || | |||| || | | Sbjct 8935 AGATCTACCTCTTGTGGATTGGAGATTTGAA-AAGGATATTAAAAGGAAACAATTGCTTA 8877 Query 19474 ATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCAA 19533 ||||| || || || |||| ||||| || || |||||||| || || || || || | Sbjct 8876 ATTATAGTATTGATTTCGGAGTTTGTATATTTTGTGGTAACTGTGTTGAATACTGTCCGA 8817 Query 19534 CAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 |||| ||| |||| ||||| |||||||||||| | |||| | ||| Sbjct 8816 CAAATTGTTTATCGATGACTGAAGAATATGAACTTTCTACTTATGA 8771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603301281792000