Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq18882 190 2e-43 >seq18882 Length=869960 Score = 190 bits (210), Expect = 2e-43 Identities = 591/909 (65%), Gaps = 7/909 (1%) Strand=Plus/Plus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 ||||| ||||| ||||||||||| ||||||||||| || |||| | ||| || Sbjct 813932 TTTTGATATTCCCCAACTCGCTTTTCAAAGAAATTAGTCTTCCCTTGGAGCGAGATTAGC 813991 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376 ||||| ||||||| ||||| | | ||| | || | || || || | | | Sbjct 813992 TCCATCCAATCAAAAGGATTCGCCACACCGTACAGCTTCCCGTACCCAAGCGCACCCAAC 814051 Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 || | || || ||||| ||||| ||||| ||||| | ||| | || || || | || Sbjct 814052 AACCTATCCGCGACAAACTCTATGTACTGACTCATCAATTCTCCATTCATCCCCACCAAC 814111 Query 4437 -CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 | ||| || ||||| | || ||||||| ||||| || || || | | || Sbjct 814112 GCGCAC-GGCAGCGCATCGCACACAAACTCTCTCTCTATCTCCACCGCCTCCTTCACTAA 814170 Query 4496 ATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAA 4555 | || | || | | | || | || | | | |||| | |||||||| Sbjct 814171 CGCCTTCACGCGCTCCTCGCTTAGCTTCGTCCTCAATAAACTATACAACAGGCACGCAAA 814230 Query 4556 ATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614 ||| || || | ||| || |||| || | |||| ||||| || || |||||||| |||| Sbjct 814231 ATCGCAGTGGAGACCCTCATCTC-GCGAGATCAACTCGTTTGAGAATGTTAATCCCGGCA 814289 Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674 |||| |||| |||||| ||||||||||| ||| ||| ||| || ||||| || || | Sbjct 814290 TTAACCCTCGCTTTTTGAGCCAAAATATCGCGCAAAAACTCCCTGAGAAGAAAATCCCCT 814349 Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATT 4734 | ||| |||||||| | ||||| |||| | | | | | | ||||| | Sbjct 814350 CCACGCAAGCAAACGCGATTAATCTCTCGGCGAAAG---TCTCCGAGCCGTCGATCCAAT 814406 Query 4735 TTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATT 4794 |||| ||||| | ||||| || ||||| |||| || | || |||| ||| | Sbjct 814407 TTAACGCCCACGTGGCTTTCTTTGCGACGCAGGGAACCGTTTCGATGGCGTGAAAGAGAC 814466 Query 4795 TACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAAT 4854 | | ||||| | || || || ||||| |||| || || |||||||| || | Sbjct 814467 GATTCTTTTCGTCGGAGTTTTTGATGTAAGTTTCTAGAAGCAGCGAGTACATTTCGGAGT 814526 Query 4855 GTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTT 4914 | || || || || || || || || ||||| ||| | || || | || || || | Sbjct 814527 GGATGTTCTCAATGGCGATTTGGAAGCCGTAGAAGGCACGCGCCTCGGCGACCTGGACCT 814586 Query 4915 CGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACG 4974 | | || || | | | ||| ||| || || ||||| ||| || || || | Sbjct 814587 CCGTCATGAACCTGCCGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGCGGCGAAGAAGG 814646 Query 4975 CCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAAT 5034 | | || || | | |||| || ||||||| | || | ||||||| | | || Sbjct 814647 CGAGCACGTGCGTGACGAAGTGCTTCTCGTCAGCGGTTAGGGCCTCCCAGTGGCGGAGAT 814706 Query 5035 CTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAG 5094 ||| | | ||||||||| ||| | ||||||||||||||||| ||||| |||||||| Sbjct 814707 CTTGCGAAAGATCAACTTCCTCAGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACATTT 814766 Query 5095 ACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTGTTGTCGTTAGGTGTAAGAA 5154 |||||| | || ||||||||||| | || ||||| | | || || | |||| Sbjct 814767 CCCAAATTTGTGGGTACTGAATCGGGAACATACAAAATCGATCGGGATTTGGGGCTAGAA 814826 Query 5155 GCGGTTCTT 5163 |||| |||| Sbjct 814827 GCGGCTCTT 814835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426916360524800