Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq95098 87.8 1e-12 seq67990 86.0 5e-12 >seq95098 Length=1037 Score = 87.8 bits (96), Expect = 1e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 ||||||||||| || |||||||| || |||||| | |||||| | ||| |||| ||| Sbjct 960 GATCAACAAAGGCTGATCTTTGCCGGAAAACAACTCGAAGATGGCCGTACTTTGGCGGAT 901 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTG 25244 ||||| |||||||||||||| || || ||| | ||| Sbjct 900 TACAACATTCAAAAGGAATCAACCCTCCACCTTGTG 865 >seq67990 Length=6038 Score = 86.0 bits (94), Expect = 5e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 ||||| || ||| | || ||||| || ||||||||||||||| | |||| | || ||| Sbjct 4466 GATCAGCAGAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGCCGAACTCTTGCAGAT 4525 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGT 25243 ||||| ||||||||||| || || |||||| |||| Sbjct 4526 TACAACATTCAAAAGGAGTCAACGCTTCACTTGGT 4560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410165259228788