Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq64209 84.2 2e-11 >seq64209 Length=8904 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 20428 TGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGAT 20487 || || || || || || ||| || || ||||||||||||||||| || || ||||| Sbjct 3139 TGGCAGTTCTATGTAGCCAATGGGGAGTTATCGTGTCAAATGTATCAGCGCTCTGCTGAC 3080 Query 20488 ATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCA 20547 ||||| |||||||| || || || ||||| ||||| || | || | |||||||| Sbjct 3079 ATGGGCCTGGGTGTGCCGTTTAACGTTGCATCATATGCTCTCTTAACATGCATGATTGCT 3020 Query 20548 CATGTT 20553 |||||| Sbjct 3019 CATGTT 3014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398570312232190