Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq95098 98.7 8e-16 >seq95098 Length=1037 Score = 98.7 bits (108), Expect = 8e-16 Identities = 148/208 (71%), Gaps = 7/208 (3%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAG- 24890 ||||| || |||||||||||| |||| || || |||||||| | || || || ||| Sbjct 846 ATGCAAATTTTTGTTAAAACCCTAACGGGTAAGACGATAACTCTTGAAGTTGA---GAGT 790 Query 24891 --CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTG-A 24947 ||| | | || | |||||||| ||| ||| | || ||||| | || | | Sbjct 789 TCCGATACAATTGATAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATTCCCCCNGGA 730 Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTA 25007 |||||||||||| || | ||| ||||| ||||| || ||| | ||| || |||||| Sbjct 729 CCAGCAACGTTTGATTTTTGCCGGCAAGCAACTAGACGATGGCCGCACTCTGGCCGATTA 670 Query 25008 CAGCATACAGAAAGAGGCCACGCTTCAT 25035 || ||||||||| ||| |||| || ||| Sbjct 669 CAACATACAGAAGGAGTCCACCCTGCAT 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417660917992640