Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq84074 87.8 2e-12 >seq84074 Length=6830 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 || ||||| |||||||| | ||| ||||||||| ||| ||||| ||||||||||| | Sbjct 3446 CAAGCAAAGTCACAGTGTAGTCCCTCATCTCTAGATATAAGCTCATTTGAAAATGTCAAC 3387 Query 13211 CCCGGCAT--AAGCCCTCGTTTTTTAATCCAAAATATAGCA 13249 || ||||| || ||||| ||||||| ||| ||||||||| Sbjct 3386 CCAGGCATTAAACCCCTC--TTTTTAAGCCAGAATATAGCA 3348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430319826783084