Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16]
126,142 sequences; 261,457,759 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq95098 147 2e-30
seq93401 129 5e-25
seq7293 125 6e-24
seq61388 122 7e-23
seq55405 122 7e-23
seq119621 120 3e-22
seq35333 118 9e-22
seq35332 116 3e-21
seq106908 105 6e-18
seq7711 105 6e-18
seq9706 104 2e-17
seq4456 102 7e-17
seq93646 84.2 2e-11
>seq95098
Length=1037
Score = 147 bits (162), Expect = 2e-30
Identities = 156/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||||||||| |||| ||||| ||| | ||||||||||| || | ||
Sbjct 846 ATGCAAATTTTTGTTAAAACCCTAACGGGTAAGACGATAACTCTTGAAGTTGAGAGTTCC 787
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC-GATCA 22337
||||| | || || | || ||| |||||||| ||||| || ||||| || || ||
Sbjct 786 GATACAATTGATAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATTCCCCCNGGACCA 727
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||||| | || ||||||||||| || |||| ||| |||||| | ||||||||||
Sbjct 726 GCAACGTTTGATTTTTGCCGGCAAGCAACTAGACGATGGCCGCACTCTGGCCGATTACAA 667
Query 22398 CATTCAAAAAGAATCCACCATACAT 22422
||| || || || |||||| | |||
Sbjct 666 CATACAGAAGGAGTCCACCCTGCAT 642
Score = 131 bits (144), Expect = 1e-25
Identities = 167/229 (73%), Gaps = 1/229 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTT-GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||||||||| ||||| || | || ||||| || |||| | ||||| |||| |
Sbjct 618 GATGCAAATTTTTNGTTAAGACCCTCACTGGTAAGACAATCACCTTGGAAGTTGAAAGCT 559
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| || |||| ||||| ||||| ||||| || |||||||| ||||
Sbjct 558 CTGACACGATCGACAATGTCAAGGCTAAAATCCAAGATAAGGAAGGAATTCCACCTGATC 499
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || ||||| || ||||| || |||||| | |||||| | | ||| | | |||||||
Sbjct 498 AGCAGCGTCTGATCTTTGCTGGAAAACAGCTTGAGGATGGCAGGACCCTTGCAGATTACA 439
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||| || || ||||| || | || | || |||| ||| | |||||
Sbjct 438 ACATACAGAAGGAATCTACTCTCCACCTGGTCCTGCGTTTGAGGGGAGG 390
Score = 98.7 bits (108), Expect = 8e-16
Identities = 143/200 (72%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAG-TGGAAACCAC 22277
||||| || ||||| || || ||||| || || ||| | ||| | | || |||| | | |
Sbjct 388 ATGCAGATCTTTGTGAAGACATTAACTGGGAAGACGATAACTTTNGGAGGTGGAGAGCTC 329
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| || | || || | ||| || || || ||||||||||| || ||||| |||||
Sbjct 328 TGACACGATCGATAATGTGAAAGCTAAGATCCAGGACAAGGAGGGGATCCCACCAGATCA 269
Query 22338 ACAACGTCTTATATTT-GCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
||| | ||||| ||| || || |||||| | ||||| | || || | |||||||
Sbjct 268 ACAGAGGCTTATTTTTNGCTGGGAAACAGCTGGAGGACGGTAGGACTCTCGCTGATTACA 209
Query 22397 ACATTCAAAAAGAATCCACC 22416
| ||||| ||||| ||||||
Sbjct 208 ATATTCAGAAAGAGTCCACC 189
Score = 89.7 bits (98), Expect = 4e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || |||||||| || ||||| || ||||||||| | || || |||||||| |||
Sbjct 990 AAGATCCAGGACAAGGAAGGGATTCCTCCGGATCAACAAAGGCTGATCTTTGCCGGAAAA 931
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
|| | || ||| ||| || | | ||||||||||||||||| ||||| |||
Sbjct 930 CAACTCGAAGATGGCCGTACTTTGGCGGATTACAACATTCAAAAGGAATCAACC 877
>seq93401
Length=1125
Score = 129 bits (142), Expect = 5e-25
Identities = 148/198 (75%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACT-TTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||| || || || ||||| ||||||| || ||| | || ||||| || || | |
Sbjct 900 ATGCAGATCTTCGTCAAAACCCNTAACCGGGAAGACGATTACCCTTGAGGTCGAGAGTTC 959
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | ||| | |||| ||||||||||| ||||| || ||||| ||||||||
Sbjct 960 TGATACGATCGACAACGTCAAGGCCAAAATTCAAGATAAGGAAGGAATTCCTCCCGATCA 1019
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| ||||| || || ||||| || || || || ||| ||||||| | ||||||||||
Sbjct 1020 GCAGCGTCTGATCTTCGCCGGGAAGCAATTGGAAGATGGCCGCACCTTGGCCGATTACAA 1079
Query 22398 CATTCAAAAAGAATCCAC 22415
||| || |||||||||||
Sbjct 1080 CATCCAGAAAGAATCCAC 1097
Score = 86.0 bits (94), Expect = 5e-12
Identities = 163/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACG-GTCACTCTTGAAGTGGAAACCAC 22277
||||| || || || ||||| ||||||| || || | ||||| ||||| |||| |
Sbjct 666 ATGCAGATCTTCGTCAAAACCCTAACCGGCAAGACCANTTACTCTCGAAGTCGAAAGTTC 725
Query 22278 CGATACCGTGGACGATATCAAACAAAAA-ATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|||||| | ||| | || || || || || ||||||||||| ||||| || ||||
Sbjct 726 CGATACGATCGACAACGTCNAAGGCCAAGATCCAGGACAAGGAGGGGATTCCTCCGGATC 785
Query 22337 AAC-AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGT-CTCCGATTA 22394
| | || | || || ||||| ||||| ||| | || || ||| || | |||||||
Sbjct 786 AGCNAAAGGCTGATCTTTGCAGGCAAGCAGCTCGAAGACGGCCGTACTTTGGCCCGATTA 845
Query 22395 CAACAT-TCAAAAAGAATCC-ACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||| || || || |||||| ||| | ||| | || | || | ||||||||
Sbjct 846 CAATATACCAGAAGGAATCCNACCCTTCATCTTGTCCTTCGTCTACGCGGAGG 898
>seq7293
Length=4729
Score = 125 bits (138), Expect = 6e-24
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || || || |||||||| ||||| || || ||||||| || || || | |
Sbjct 4247 AGATGCAGATCTTCGTGAAAACTTTGACCGGCAAGACAATCACTCTCGAGGTCGAGAGCT 4306
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|||||||| | || | |||| || ||||| ||||||||||||||||| || || |
Sbjct 4307 CCGATACCATCGATAACGTCAAGGCTAAGATTCAGGACAAGGAGGGTATTCCCCCAGACC 4366
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| |||||| | || || ||||| || ||| | ||||| ||| || | |||||||||
Sbjct 4367 AGCAACGTTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGTACTTTGGCCGATTACA 4426
Query 22397 ACATTCAAAAAGAATCCAC 22415
|||| || || || || ||
Sbjct 4427 ACATCCAGAAGGAGTCAAC 4445
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || ||||| ||| | ||||| || || |||||||||| || || | ||
Sbjct 4477 ATGCAGATCTTCGTTAAGACTCTGACCGGCAAGACCATCACTCTTGAGGTTGAGAGTTCC 4536
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | || || ||||| |||||||| || ||||| || || ||
Sbjct 4537 GACACCATTGACAACGTTAAGGCTAAGATTCAGGACAAGGAAGGAATTCCGCCGGACCAG 4596
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || ||||| || ||||| || ||| ||| ||| | |||| ||||||
Sbjct 4597 CAGAGGTTGATTTTCGCCGGGAAGCAGTTGGAAGATGGCCGTACCCTTGCCGACTACAAC 4656
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || ||| | || || ||| | | |||| ||||||
Sbjct 4657 ATTCAGAAGGAGTCAACCCTCCACTTGGTTCTCAGGCTGCGTGGAGGT 4704
>seq61388
Length=1455
Score = 122 bits (134), Expect = 7e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || |||||| |||| ||||||||||||| | ||
Sbjct 818 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAAACGATCACCCTTGAAGTGGAAAGCTCC 759
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || ||||| |||||||| ||||||||||| || || || || ||
Sbjct 758 GACACAATTGATAATGTCAAAGCCAAAATTCAGGACAAGGAGGGGATCCCTCCGGACCAG 699
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | ||||| ||||| || || || | |||||| ||||| | | || ||||||
Sbjct 698 CAAAGGCTTATTTTTGCAGGTAAGCAACTTGAGGATGGACGCACACTTGCTGACTACAAC 639
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || || || ||
Sbjct 638 ATTCAGAAGGAGTCTAC 622
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| ||||| | || |||||||| | ||| | |||||||||| | ||
Sbjct 590 ATGCAAATCTTTGTAAAAACCCTGACTGGTAAAACAATAACTTTGGAAGTGGAAAGCTCC 531
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| ||||| || |||||||||||||| ||||| || ||
Sbjct 530 GACACCATTGACAACGTCAAGGCTAAAATCCAGGACAAGGAGGGTATCCCACCAGACCAG 471
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| |||||||| | |||||| || || | | || || |||
Sbjct 470 CAGAGGTTGATTTTTGCTGGCAAACAACTTGAGGATGGTCGTACTCTTGCTGACTATAAC 411
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| ||||| || || ||| | || || ||
Sbjct 410 ATCCAAAAGGAGTCAACCCTTCACTTGGT 382
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || ||||| ||||| | || ||||| | | |
Sbjct 362 ATGCAGATATTTGTGAAGACTCTTACGGGGAAAACAATCACTTTGGAGGTGGAGAGCTCT 303
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | ||| ||||||||||||||||||||||| ||||| |||||
Sbjct 302 GACACTATTGACAATGTAAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCAGATCAG 243
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| ||||| || || ||| | || ||| | || | | || || |||
Sbjct 242 CAGAGGCTTATCTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAAC 183
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || ||||||||||| | || || ||| | || | || || |||
Sbjct 182 ATCCAGAAAGAATCCACACTCCACTTGGTTCTTCGCCTCCGTGGTGGT 135
>seq55405
Length=4719
Score = 122 bits (134), Expect = 7e-23
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| |||||||||||| | || ||||| || | || ||||| || |||| |
Sbjct 3420 AGATGCAAATCTTTGTTAAAACTCTCACAGGTAAGACCATAACCCTTGAGGTTGAAAGCT 3361
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|||| ||| | || || ||||| |||||| || || ||||| || || ||||| || |
Sbjct 3360 CCGACACCATTGATAATGTCAAAGCAAAAATCCAGGATAAGGAAGGGATCCCACCTGACC 3301
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | ||||| ||||| || || || | |||||| ||||| | | || || |
Sbjct 3300 AGCAGAGGCTTATCTTTGCTGGTAAGCAACTGGAGGATGGGCGCACACTTGCTGACTATA 3241
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|||| || || || |||||| | || || || ||||
Sbjct 3240 ACATCCAGAAGGAGTCCACCCTTCACTTGGTCCTGCG 3204
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||||||||| || || || || ||||| |||| || || || || |
Sbjct 2506 ATGCAGATTTTTGTTAAGACCTTGACTGGAAAAACTATCACCCTGGAGGTTGAGGGTTCG 2447
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || || || || | || |||||||| |||||||| || |||||||| |||||
Sbjct 2446 GACACTGTTGATAATGTGAAGGCTAAAATTCAGGACAAGGAAGGGATTCCACCTGATCAG 2387
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || || | |||||| ||||| | | ||||||||
Sbjct 2386 CAGAGGTTGATCTTTGCTGGTAAGCAACTGGAGGATGGGCGCACTTTGGCTGATTACAAT 2327
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
|| ||||| || || || | ||| | || | || |||| || ||||||
Sbjct 2326 ATCCAAAAGGAGTCTACTTTGCATCTCGTCCTTCGCCTGCGTGGTGGTTTT 2276
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| ||||| | || || ||||| ||||| | ||||| || | |
Sbjct 3190 ATGCAGATCTTTGTGAAAACCCTTACTGGAAAAACTATCACTTTGGAAGTTGAGAGTTCT 3131
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| |||||||| || ||||||||||| ||||| || ||
Sbjct 3130 GACACTATTGACAATGTCAAGGCCAAAATTCAGGATAAGGAGGGTATCCCACCAGACCAG 3071
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||| | || ||| || || | | |||||||||
Sbjct 3070 CAGAGACTGATCTTTGCTGGAAAGCAGCTTGAAGATGGTCGTACTCTTGCTGATTACAAC 3011
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || ||||| ||
Sbjct 3010 ATCCAGAAGGAATCAAC 2994
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || ||| | || || || || | || | ||||| || | |
Sbjct 2962 ATGCAAATCTTTGTCAAGACTCTTACTGGGAAGACTATTACCTTGGAAGTTGAGAGTTCA 2903
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || | ||| ||| || ||||||||||| || || || || |||||
Sbjct 2902 GATACCATTGATAATGTTAAAGCAAAGATCCAAGACAAGGAAGGCATCCCTCCAGATCAG 2843
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||| | || ||| | ||| | | || |||||
Sbjct 2842 CAGAGGCTCATCTTTGCTGGTAAGCAGCTTGAAGATGGAAGGACCCTTGCTGACTACAAT 2783
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || |||||| | || || || | || | || ||||||
Sbjct 2782 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGCCTTCGTGGAGGT 2735
>seq119621
Length=933
Score = 120 bits (132), Expect = 3e-22
Identities = 146/198 (74%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || |||||| |||| ||||||||||||| | ||
Sbjct 32 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAAACGATCACCCTTGAAGTGGAAAGCTCC 91
Query 22279 GATACCGTGGACGATATCAAA-CAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| || | || || ||||| | |||||||| ||||||||||| || || || || ||
Sbjct 92 GACACAATTGATAATGTCAAAGCCNAAAATTCAGGACAAGGAGGGGATCCCTCCGGACCA 151
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
||| | ||||| ||||| || || || | |||||| ||||| | | || |||||
Sbjct 152 GCAAAGGCTTATTTTTGCAGGTAAGCAACTTGAGGATGGACGCACACTTGCTGACTACAA 211
Query 22398 CATTCAAAAAGAATCCAC 22415
|||||| || || || ||
Sbjct 212 CATTCAGAAGGAGTCTAC 229
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| ||||| | || |||||||| | ||| | |||||||||| | ||
Sbjct 261 ATGCAAATCTTTGTAAAAACCCTGACTGGTAAAACAATAACTTTGGAAGTGGAAAGCTCC 320
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| ||||| || |||||||||||||| ||||| || ||
Sbjct 321 GACACCATTGACAACGTCAAGGCTAAAATCCAGGACAAGGAGGGTATCCCACCAGACCAG 380
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| |||||||| | |||||| || || | | || || |||
Sbjct 381 CAGAGGTTGATTTTTGCTGGCAAACAACTTGAGGATGGTCGTACTCTTGCTGACTATAAC 440
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| ||||| || || ||| | || || ||
Sbjct 441 ATCCAAAAGGAGTCAACCCTTCACTTGGT 469
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || ||||| ||||| | || ||||| | | |
Sbjct 489 ATGCAGATATTTGTGAAGACTCTTACGGGGAAAACAATCACTTTGGAGGTGGAGAGCTCT 548
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | ||| ||||||||||||||||||||||| ||||| |||||
Sbjct 549 GACACTATTGACAATGTAAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCAGATCAG 608
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| ||||| || || ||| | || ||| | || | | || || |||
Sbjct 609 CAGAGGCTTATCTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAAC 668
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || ||||||||||| | || || ||| | || | || || |||
Sbjct 669 ATCCAGAAAGAATCCACACTCCACTTGGTTCTTCGCCTCCGTGGTGGT 716
>seq35333
Length=5286
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || |||||||| | || |||||||| |||| | || ||||| | ||
Sbjct 194 ATGCAGATCTTCGTTAAAACACTCACGGGTAAAACAATCACCTTGGAGGTGGAGAGTTCC 253
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || ||||| || || ||||| || || ||||| |||||
Sbjct 254 GACACAATTGATAATGTTAAGGCCAAAATCCAGGATAAGGAAGGAATCCCACCGGATCAG 313
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || ||||||||| | |||||| | | ||| | | |||||||||
Sbjct 314 CAGCGTCTGATCTTCGCTGGCAAACAGCTTGAGGATGGCAGGACCCTTGCAGATTACAAC 373
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || ||||| || | || | ||| |||| ||| | ||||||
Sbjct 374 ATTCAGAAGGAATCGACTCTTCACCTGGTTCTGCGTTTGAGGGGAGGT 421
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| || || | || || || || | || | || ||||| | |
Sbjct 422 ATGCAGATTTTTGTAAAGACACTCACTGGGAAGACAATAACATTGGAGGTGGAGAGTTCT 481
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || | ||| || ||||| ||||||||||| |||||||| ||||||
Sbjct 482 GATACAATTGACAATGTAAAAGCTAAGATTCAGGACAAGGAGGGAATTCCACCGGATCAA 541
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | ||||| || || || || ||| |||||||| |||||| | | ||||| |||
Sbjct 542 CAAAGGCTTATCTTCGCTGGAAAGCAGCTAGAGGATGGCCGCACACTTGCTGATTATAAC 601
Query 22399 ATTCAAAAAGAATCCACCATACAT 22422
||||| || || || ||| | |||
Sbjct 602 ATTCAGAAGGAGTCTACCCTCCAT 625
Score = 100 bits (110), Expect = 2e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 22256 TCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACA 22315
|||| ||||| ||||| | ||||||| | ||| || | || ||| ||||||||||
Sbjct 3 TCACGCTTGAGGTGGAGAGTTCCGATACTATAGACAATGTGAAGGCAAAGATTCAAGACA 62
Query 22316 AGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATC 22375
|||| || || || || || || ||| | | || |||||||| || || || || ||
Sbjct 63 AGGAAGGAATCCCGCCGGACCAGCAAAGGTTGATCTTTGCCGGAAAGCAATTGGAAGACG 122
Query 22376 ACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGAT 22435
||| ||| | |||| || ||||| ||||||||||| || | ||| | ||| | || |
Sbjct 123 GCCGGACCTTGGCCGACTATAACATCCAAAAAGAATCAACTCTTCATCTGGTTCTTCGTT 182
Query 22436 TGCGCGGAGG 22445
| || |||||
Sbjct 183 TACGTGGAGG 192
>seq35332
Length=499
Score = 116 bits (128), Expect = 3e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| || || || ||||| ||||||| || || ||||||| ||||| || |
Sbjct 15 AATATGCAGATCTTCGTCAAAACCCTAACCGGCAAGACCATCACTCTCGAAGTTGAGAGT 74
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| || | ||| | |||| || || || ||||||||||||||||| || |||
Sbjct 75 TCCGACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGAT 134
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| ||| | | || ||||| || || || || || ||| ||| ||| | ||||||||
Sbjct 135 CAGCAAAGATTGATCTTTGCAGGAAAGCAATTGGAAGATGGCCGTACCTTGGCCGATTAC 194
Query 22396 AACATTCAAAAAGAATCCACCATACAT 22422
|| || || || ||||||||| | |||
Sbjct 195 AATATCCAGAAGGAATCCACCCTCCAT 221
>seq106908
Length=1159
Score = 105 bits (116), Expect = 6e-18
Identities = 144/200 (72%), Gaps = 1/200 (1%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAA-CCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
|| ||||| || || || ||||| ||| |||| || || ||||||| ||||| || |
Sbjct 200 AATATGCAGATCTTCGTCAAAACCCTAANCCGGCAAGACCATCACTCTCGAAGTTGAGAG 141
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
|||| || | ||| | |||| || || || ||||||||||||||||| || ||
Sbjct 140 TTCCGACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGA 81
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||| ||| | | || ||||| || || || || || ||| ||| ||| | |||||||
Sbjct 80 TCAGCAAAGATTGATCTTTGCAGGAAAGCAATTGGAAGATGGCCGTACCTTGGCCGATTA 21
Query 22395 CAACATTCAAAAAGAATCCA 22414
||| || || || |||||||
Sbjct 20 CAATATCCAGAAGGAATCCA 1
>seq7711
Length=5731
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || ||||| |||| || || || | || || || || || | ||
Sbjct 71 ATGCAAATATTCGTCAAAACCCTAACAGGGAAGACCATTACCCTCGAGGTCGAGAGTTCC 130
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | || || || ||||||||||| || || ||||| ||||||
Sbjct 131 GACACTATTGATAACGTGAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAA 190
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||||| |||||| |||||| | | ||||| |||
Sbjct 191 CAGAGACTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGCACCTTGGCAGATTATAAC 250
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||| || ||| | ||| | || | || | || ||||||
Sbjct 251 ATTCAAAAAGAGTCTACCCTTCATCTTGTCCTTCGTCTCCGTGGAGGT 298
>seq9706
Length=10732
Score = 104 bits (114), Expect = 2e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || || || ||||| |||| || || || | || | || ||||| |
Sbjct 1216 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATTACGTTAGAGGTGGAGTCT 1157
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || ||| | ||| || | || || ||||||||||||||||| || ||||| ||
Sbjct 1156 TCGGACACCATCGACAATGTGAAGGCGAAGATTCAAGACAAGGAGGGAATCCCACCGGAC 1097
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || ||||||||||| ||| | ||||| || || | ||||||||
Sbjct 1096 CAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGACGGACTTTGGCCGATTAC 1037
Query 22396 AACATTCAAAAAGAATCCAC 22415
|| ||||| || || || ||
Sbjct 1036 AATATTCAGAAGGAGTCGAC 1017
>seq4456
Length=3005
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| || || || ||||| ||||||| || || | ||||||||||| || |
Sbjct 2680 AATATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATAACTCTTGAAGTCGAGAGT 2739
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
||||||| | ||| | |||| || || |||||||| ||||| ||||| || |||
Sbjct 2740 TCCGATACGATCGACAACGTCAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGAT 2799
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || || | || || ||||| || || | || || || || | ||||||||
Sbjct 2800 CAGCAGCGCTTGATCTTCGCCGGAAAGCAACTTGAAGACGGGCGTACTCTGGCCGATTAC 2859
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || ||||| ||| | ||| | || | || | || ||||||
Sbjct 2860 AATATTCAGAAGGAATCAACCCTTCATCTTGTCCTCCGTCTCCGTGGAGGT 2910
>seq93646
Length=475
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/198 (69%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAA-ACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||||| ||||| || ||| | ||||| || || | || ||||| || |||| | |
Sbjct 211 ATGCAAATCTTTGTGAAGACTCTTACCGGNCAAGACCATTACCCTTGAGGTTGAAAGCTC 270
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || || | ||| || || || || ||||| || | ||||| || ||
Sbjct 271 TGACACCATTGATAATGTAAAAGCCAANATNCAGGANAAGGANGGNNTCCCACCNGACCA 330
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | || || ||||| || || ||| | || ||| || || | | ||||||||
Sbjct 331 GCAGAGNCTNATCTTTGCTGGAAAGCAGCTTGAAGATGGTCGTACTCTTGCTGATTACAA 390
Query 22398 CATTCAAAAAGAATCCAC 22415
||| || || ||||| ||
Sbjct 391 CATCCAGAAGGAATCAAC 408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419082728798230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |