Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq64209 87.8 2e-12 >seq64209 Length=8904 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 20239 ACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAAC 20298 |||| ||||||||||| ||| | |||||||| | ||| |||| |||||| || || Sbjct 3008 ACCACAAACATGAGCAATCATGCATGTTAAGAGAGCATATGATGCAACGTTAAACGGCAC 3067 Query 20299 TCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 |||| |||||||| | || | |||||||| ||||| || | ||| || | ||||| Sbjct 3068 ACCCAGGCCCATGTCAGCAGAGCGCTGATACATTTGACACGATAACTCCCCATTGGCTAC 3127 Query 20359 ATAAAATTGACATAACAA 20376 ||| || || || ||||| Sbjct 3128 ATAGAACTGCCAAAACAA 3145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440676854403280