Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq93401 145 2e-29 seq35332 138 3e-27 seq7711 136 9e-27 seq119621 118 2e-21 seq61388 118 2e-21 seq119983 109 1e-18 seq55405 107 5e-18 seq35333 107 5e-18 seq7293 104 5e-17 seq95098 96.9 8e-15 seq87541 84.2 5e-11 >seq93401 Length=1125 Score = 145 bits (160), Expect = 2e-29 Identities = 171/229 (75%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 288249 ACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAG 288308 ||| || || || || || ||||||| ||| |||||| ||||| || || ||||| | Sbjct 1125 ACCACGAAGCCTGAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCGGCCAA 1066 Query 288309 CGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGAT 288368 ||||| || ||||| ||||| || || ||||||||||||||||| ||| || || Sbjct 1065 GGTGCGGCCATCTTCCAATTGCTTCCCGGCGAAGATCAGACGCTGCTGATCGGGAGGAAT 1006 Query 288369 TCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTAC 288425 |||||| ||||| || ||||| || || ||||| || || | ||| ||| || || Sbjct 1005 TCCTTCCTTATCTTGAATTTTGGCCTTGACGTTGTCGATCGTATCAGAACTC---TCGAC 949 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCA-GAGTCTTGACGAATATCTGCAT 288473 || || || |||||||||||||| | | || |||||||| |||||||| Sbjct 948 CTCAAGGGTAATCGTCTTCCCGGTTANGGGTTTTGACGAAGATCTGCAT 900 Score = 98.7 bits (108), Expect = 2e-15 Identities = 172/244 (70%), Gaps = 13/244 (5%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGT--GCTTTCTTTTTGGATATTATA 288299 |||| || ||||| || | ||| || ||||||| || | || ||| | | ||||| || Sbjct 902 CATG-CCTCCGCGTAGACGAAGGACAAGATGAAGGGTNGGATTCCTTCTGGTATATTGTA 844 Query 288300 GTCGG-CGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC----GCTGT 288354 |||| | | || || |||||||| | || || ||||| |||||||| | |||| Sbjct 843 ATCGGGCCAAAGTACGGCCGTCTTCGAGCTGCTTGCCTGCAAAGATCAGCCTTTNGCTGA 784 Query 288355 TGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC-ACGTTTTCTATAGAATC 288413 | | | || || || || || |||||||| || || || ||||| || || | ||| Sbjct 783 TCCGGA---GGAATCCCCTCCTTGTCCTGGATCTTGGCCTTNGACGTTGTCGATCGTATC 727 Query 288414 GCTCGATTCTACTTCGAGCGTGA-TCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCA 288472 | ||| |||||||| || | | ||||| ||||| || || |||||||| ||||||| Sbjct 726 GGAACTTTCGACTTCGAGAGTAANTGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCA 667 Query 288473 TTAT 288476 | || Sbjct 666 TNAT 663 >seq35332 Length=499 Score = 138 bits (152), Expect = 3e-27 Identities = 170/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| || || || ||||||| ||| ||| || || || ||||||||||| Sbjct 473 TCCACCACGGAGCCTGAGGACAAGATGAAGGGTGGATTCCTTCTGAATGTTATAGTCGGC 414 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || |||||||| ||||| || || |||||||||| | || || || Sbjct 413 CAAGGTACGGCCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCCGGCGG 354 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTC 288422 ||| ||||| || ||||||||||| || |||||||| || || | || ||| || Sbjct 353 GATACCTTCCTTGTCCTGGATTTTAGCCTTCACGTTGTCGATCGTGTC---CGAACTCTC 297 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||||||||| || || || |||||||| |||||||| Sbjct 296 CACCTCAAGAGTAATCGTCTTCCCTGTAAGGGTTTTGACGAAGATCTGCAT 246 >seq7711 Length=5731 Score = 136 bits (150), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | ||| || ||||||| || |||||||| || ||||| || || Sbjct 297 CCTCCACGGAGACGAAGGACAAGATGAAGGGTAGACTCTTTTTGAATGTTATAATCTGCC 238 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || || || ||||| || |||||||| | ||||||| |||| Sbjct 237 AAGGTGCGACCATCCTCCAACTGCTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGTGGG 178 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || ||||| || || ||||| || || |||||||| || |||| ||| ||| || Sbjct 177 ATCCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTATCAATAGTGTCGGAACTC---TCG 121 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || |||||||| || || || ||||||||||| ||||| Sbjct 120 ACCTCGAGGGTAATGGTCTTCCCTGTTAGGGTTTTGACGAATATTTGCAT 71 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || ||||| | ||| || || || || |||||||| || Sbjct 753 CCACCACGAAGACGAAGGACAAGATGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGCA 694 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || |||||||| || | ||| ||| ||| Sbjct 693 AGGGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGCCTCTGCTGATCTGGTGGA 634 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || |||||||| |||||||| || || || || || || || | ||| ||| || Sbjct 633 ATCCCTTCTTTGTCCTGGATCTTTGCCTTGACATTATCAATGGTATCAGAACTC---TCC 577 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||||||||| || |||| |||||| || ||||||||||| Sbjct 576 ACCTCCAAGGTGATCGTCTTTCCTGTCAAAGTCTTAACAAATATCTGCAT 527 >seq119621 Length=933 Score = 118 bits (130), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | || | ||| |||||| ||||| |||||||| || Sbjct 715 CCACCACGGAGGCGAAGAACCAAGTGGAGTGTGGATTCTTTCTGGATGTTATAGTCTGCA 656 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||| | || ||||| || ||||| || | ||| ||| |||| Sbjct 655 AGAGTCCTTCCATCTTCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCTGGTGGG 596 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || || || ||||| ||||| || || || |||| || |||| || Sbjct 595 ATACCCTCCTTGTCTTGAATTTTGGCTTTTACATTGTCAATAGTGTCAGAGCTC---TCC 539 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| || ||||| || |||||||| || ||||||||||| Sbjct 538 ACCTCCAAAGTGATTGTTTTCCCCGTAAGAGTCTTCACAAATATCTGCAT 489 Score = 95.1 bits (104), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | ||| || | |||| || || |||||||| ||||||| Sbjct 491 CATG-CCACCACGGAGACGAAGCACCAAGTGAAGGGTTGACTCCTTTTGGATGTTATAGT 433 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || || || || | |||||| || || || |||| | ||| || Sbjct 432 CAGCAAGAGTACGACCATCCTCAAGTTGTTTGCCAGCAAAAATCAACCTCTGCTGGTCTG 373 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||||| || || || ||||||||||| || || ||||| || || | ||| || Sbjct 372 GTGGGATACCCTCCTTGTCCTGGATTTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTTT 313 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| | || || || || || ||||| || || || || || ||||| Sbjct 312 CCACTTCCAAAGTTATTGTTTTACCAGTCAGGGTTTTTACAAAGATTTGCAT 261 >seq61388 Length=1455 Score = 118 bits (130), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | || | ||| |||||| ||||| |||||||| || Sbjct 136 CCACCACGGAGGCGAAGAACCAAGTGGAGTGTGGATTCTTTCTGGATGTTATAGTCTGCA 195 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||| | || ||||| || ||||| || | ||| ||| |||| Sbjct 196 AGAGTCCTTCCATCTTCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCTGGTGGG 255 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || || || ||||| ||||| || || || |||| || |||| || Sbjct 256 ATACCCTCCTTGTCTTGAATTTTGGCTTTTACATTGTCAATAGTGTCAGAGCTC---TCC 312 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| || ||||| || |||||||| || ||||||||||| Sbjct 313 ACCTCCAAAGTGATTGTTTTCCCCGTAAGAGTCTTCACAAATATCTGCAT 362 Score = 95.1 bits (104), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | ||| || | |||| || || |||||||| ||||||| Sbjct 360 CATG-CCACCACGGAGACGAAGCACCAAGTGAAGGGTTGACTCCTTTTGGATGTTATAGT 418 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || || || || | |||||| || || || |||| | ||| || Sbjct 419 CAGCAAGAGTACGACCATCCTCAAGTTGTTTGCCAGCAAAAATCAACCTCTGCTGGTCTG 478 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||||| || || || ||||||||||| || || ||||| || || | ||| || Sbjct 479 GTGGGATACCCTCCTTGTCCTGGATTTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTTT 538 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| | || || || || || ||||| || || || || || ||||| Sbjct 539 CCACTTCCAAAGTTATTGTTTTACCAGTCAGGGTTTTTACAAAGATTTGCAT 590 >seq119983 Length=969 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || ||||| | ||| || || || || |||||||| || Sbjct 413 CCACCACGAAGACGAAGGACAAGATGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGCA 354 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || |||||||| || | ||| ||| ||| Sbjct 353 AGGGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGCCTCTGCTGATCTGGTGGA 294 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || |||||||| |||||||| || || || || || || || | ||| ||| || Sbjct 293 ATCCCTTCTTTGTCCTGGATCTTTGCCTTGACATTATCAATGGTATCAGAACTC---TCC 237 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||||||||| || |||| |||||| || ||||||||||| Sbjct 236 ACCTCCAAGGTGATCGTCTTTCCTGTCAAAGTCTTAACAAATATCTGCAT 187 >seq55405 Length=4719 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || || | |||| ||| || || ||||| |||||||| || Sbjct 3192 CCACCCCTGAGACGCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCA 3251 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | ||| || || || ||||| || | ||| || | |||| Sbjct 3252 AGTGTGCGCCCATCCTCCAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGTGGG 3311 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| |||||||||||||| ||||| || || || || | ||| ||| || Sbjct 3312 ATCCCTTCCTTATCCTGGATTTTTGCTTTGACATTATCAATGGTGTCGGAGCTTTCAACC 3371 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || ||||| || || || || ||||| Sbjct 3372 TCAAGGGTTATGGTCTTACCTGTGAGAGTTTTAACAAAGATTTGCAT 3418 Score = 102 bits (112), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| |||||||| | || || ||||||||||| || || || Sbjct 2280 CCACCACGCAGGCGAAGGACGAGATGCAAAGTAGACTCCTTTTGGATATTGTAATCAGCC 2339 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | ||| || || || ||||||| | ||| ||| | ||| Sbjct 2340 AAAGTGCGCCCATCCTCCAGTTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGTGGA 2399 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTCT 288423 || ||||| || ||||| ||||| || ||||| || || | || || ||| || Sbjct 2400 ATCCCTTCCTTGTCCTGAATTTTAGCCTTCACATTATCAACAGTGTC---CGAACCCTCA 2456 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || ||||| || || || |||| ||||| || || ||||||||| Sbjct 2457 ACCTCCAGGGTGATAGTTTTTCCAGTCAAGGTCTTAACAAAAATCTGCATT 2507 Score = 96.9 bits (106), Expect = 8e-15 Identities = 141/196 (72%), Gaps = 10/196 (5%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| ||||| || || || | ||| ||||| | || || || || ||| Sbjct 2772 TCCTTCTGGATATTGTAGTCAGCAAGGGTCCTTCCATCTTCAAGCTGCTTACCAGCAAAG 2831 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| ||| ||||| ||| ||||| || || ||||| || ||||| || Sbjct 2832 ATGAGCCTCTGCTGA---TCTGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCTTTAACA 2888 Query 288400 TTTTCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCT 288457 || || || | ||| | | ||| ||||| | || || |||||||| || ||||||| Sbjct 2889 TTATCAATGGTATC--TGAACTCTCAACTTCCAAGGTAATAGTCTTCCCAGTAAGAGTCT 2946 Query 288458 TGACGAATATCTGCAT 288473 |||| || || ||||| Sbjct 2947 TGACAAAGATTTGCAT 2962 >seq35333 Length=5286 Score = 107 bits (118), Expect = 5e-18 Identities = 133/181 (73%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| || ||||||| || |||||||||||| ||||||||||| | || || ||||| Sbjct 178 AAGAACCAGATGAAGAGTTGATTCTTTTTGGATGTTATAGTCGGCCAAGGTCCGGCCGTC 119 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 ||| ||||| ||||| || ||||||| | || || ||||||||||| || || Sbjct 118 TTCCAATTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCCGGCGGGATTCCTTCCTTGTC 59 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGAT 288437 || || || || ||||| || ||||||| |||| ||| || || || |||||||| Sbjct 58 TTGAATCTTTGCCTTCACATTGTCTATAGTATCGGAACTC---TCCACCTCAAGCGTGAT 2 Query 288438 C 288438 | Sbjct 1 C 1 Score = 100 bits (110), Expect = 7e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || || || || || || || | || || || | ||||| || ||||| Sbjct 385 TTCCTTCTGAATGTTGTAATCTGCAAGGGTCCTGCCATCCTCAAGCTGTTTGCCAGCGAA 326 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||||||||||| ||| |||||||||||| |||||||||||||| || || || || Sbjct 325 GATCAGACGCTGCTGATCCGGTGGGATTCCTTCCTTATCCTGGATTTTGGCCTTAACATT 266 Query 288402 TTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | ||| ||| || || || | ||||| || || || || || || || Sbjct 265 ATCAATTGTGTCGGAACTC---TCCACCTCCAAGGTGATTGTTTTACCCGTGAGTGTTTT 209 Query 288459 GACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 208 AACGAAGATCTGCAT 194 >seq7293 Length=4729 Score = 104 bits (114), Expect = 5e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || |||||||| || || || || ||||| || || || || ||||| Sbjct 4667 TCCTTCTGAATGTTGTAGTCGGCAAGGGTACGGCCATCTTCCAACTGCTTCCCGGCGAAA 4608 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || || |||||||| || ||||| || || || || ||||| Sbjct 4607 ATCAACCTCTGCTGGTCCGGCGGAATTCCTTCCTTGTCCTGAATCTTAGCCTTAACGTTG 4548 Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| ||| || || || || ||||| ||||| |||||||||||||| Sbjct 4547 TCAATGGTGTCGGAACTC---TCAACCTCAAGAGTGATGGTCTTGCCGGTCAGAGTCTTA 4491 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4490 ACGAAGATCTGCAT 4477 >seq95098 Length=1037 Score = 96.9 bits (106), Expect = 8e-15 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| ||| ||||| || ||||| || || ||| Sbjct 160 CCACCACGGAGACGGAGCACAAGGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGCG 219 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA-TCAGACGCTGTTGAGAATCTGG 288365 || || | ||||| || | ||||| || || || | | || | ||||||| ||| Sbjct 220 AGAGTCCTACCGTCCTCCAGCTGTTTCCCAGCNAAAAATAAGCCTCTGTTGATCTGGTGG 279 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 ||| || || || |||||||| || |||||||| || || || | || |||| | | Sbjct 280 GATCCCCTCCTTGTCCTGGATCTTAGCTTTCACATTATCGATCGTGTCAGAGCTC--TCC 337 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | | || ||||||||||| || | ||||| || || ||||||||| Sbjct 338 ACCTCCNAAAGTTATCGTCTTCCCAGTTAATGTCTTCACAAAGATCTGCATT 389 Score = 95.1 bits (104), Expect = 3e-14 Identities = 140/196 (71%), Gaps = 7/196 (4%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || || || || || || || | || || || | |||||||| || || Sbjct 425 TTCCTTCTGTATGTTGTAATCTGCAAGGGTCCTGCCATCCTCAAGCTGTTTTCCAGCAAA 484 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||||||||||| ||| | ||| |||||||| ||||| |||||||| || || || || Sbjct 485 GATCAGACGCTGCTGATCAGGTGGAATTCCTTCCTTATCTTGGATTTTAGCCTTGACATT 544 Query 288402 TTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | || ||| ||| ||||| | ||||| ||||| || || || ||||| Sbjct 545 GTCGATCGTGTCAGAGCT---TTCAACTTCCAAGGTGATTGTCTTACCAGTGAGGGTCTT 601 Query 288459 GACG-AATATCTGCAT 288473 || || || ||||| Sbjct 602 AACNAAAAATTTGCAT 617 >seq87541 Length=1860 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| || || | ||||| || | || || || |||||| Sbjct 24 TCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTACCGTCCTCGAGCTGCTTCCCAGCGAAG 83 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||||||||| || |||||||| || || ||||| || | || || || Sbjct 84 ATGAGACGCTGTTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGTCTTGACATTG 143 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAG--TCTTGA 288460 || || | ||| || || || || | || || |||||||| || || | | || | Sbjct 144 TCAATGGTATCAGAAGACTCAACCTCTAAGGTTATGGTCTTCCCCGTTAGGGNNTTTTCA 203 Query 288461 CGAATATCTGCAT 288473 |||| |||||||| Sbjct 204 CGAAGATCTGCAT 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177747849194276