Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq7711 105 1e-17 >seq7711 Length=5731 Score = 105 bits (116), Expect = 1e-17 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| | ||||| ||||||| || || ||||| | || || || | || Sbjct 72 TGCAAATATTCGTCAAAACCCTAACAGGGAAGACCATTACCCTCGAGGTCGAGAGTTCCG 131 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | || || || || || ||| || ||||| || ||||| ||||||| Sbjct 132 ACACTATTGATAACGTGAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAAC 191 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || ||||| || || || || || ||| | | || || |||||||||| | Sbjct 192 AGAGACTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGCACCTTGGCAGATTATAACA 251 Query 146212 TACAAAAAGAATCGAC 146227 | |||||||| || || Sbjct 252 TTCAAAAAGAGTCTAC 267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 784926792474640